Clupea harengus (Atlantic herring): 105908495
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Entry
105908495 CDS
T09045
Symbol
clockb
Name
(RefSeq) clock circadian regulator b isoform X1
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105908495 (clockb)
03036 Chromosome and associated proteins [BR:
char03036
]
105908495 (clockb)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
105908495 (clockb)
Transcription factors [BR:
char03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105908495 (clockb)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
105908495 (clockb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
bHLH_NPAS4
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
105908495
NCBI-ProteinID:
XP_031415069
Ensembl:
ENSCHAG00000010310
UniProt:
A0A6P8ESN9
LinkDB
All DBs
Position
22:11442306..11463407
Genome browser
AA seq
893 aa
AA seq
DB search
MHAIVLPLIESLRKGFFFCRDEVFDGLEEDEKDKAKRVSRNKSEKKRRDQFNVLIKELGG
MLPGNTRKMDKSTILQKSIDFLCKHKEIAAQSESSEIRQDWKPQFLSNEEFTQLMLEALD
GFFLAIMTDGNIIYVSESVTSLLEHLPSDLVDQNLLNFLPEGEHSEVYKALSSHPEGENL
SLEYLKTKNQLEFCCHVLRGNMDPKETQVYEYVKFIGSFKSLHTGNPSLVTRNGLEGVLQ
RALRPAFDDQVCFIATVKLVKPQFIKEMCLVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG
YLPFEVLGTSGYDYYHVDDLEALAKCHEHLMQYGKGKSCHYRFLTKGQQWIWLQTQYYIT
YHQWNSRPEFIVCVHTVVSYAEVRAERRRGMGIEESPPQINDKSQDSESQLNTSSLKEAL
ERFSRSRTPSSSSRSSRKSSHTAISDTNTCGSTPSKLQVDPSTSPHPAAPSTVEMNSQRR
SSISNQSMCSQTTAQSTTSTLGPQPPPQQPPPQQQPQPQQQPQQQPQQQQQQQQQQVQPD
VQFTAQLNAMQHLKDQLEQRTRMIEANIQKQQVELRQIQEQLQRVQGPGTQMFLQQSVGG
GLNVQLPQGGTAVLGAGAQAGMLTIQSGQQSVSSSEQVAGAGQHTTLAQHQQLQQQQQQA
AAPQQQALQSSTLSQTQHASQGALPTPLYNTMMISQPAPANVMPIATSLAHSSSQGTTIT
TFTQDRQIRFPAGQQLVTKLVTAPMTCGAVMVPTTMFMYNPFAQQQGQAQAITLQQQQQG
QPQADSQTQASQGQVTQTGIPQQTQQQAQFLQGTRLLHSNQSTQLILQAAFPIQQQGTFT
TTTTQQPQQHRQQPQQQRQQPHQQRQQQLKPQTQKQHKTLSNHQTDGASTQSQ
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcaattgtgctgccattgatagagagcttgaggaaaggtttttttttttgtagg
gatgaggtttttgatggattggaggaagatgagaaggataaagccaaacgagtttccaga
aacaagtcagaaaagaagcgcagggaccagttcaatgtgctcatcaaggagcttggcggc
atgctgccaggcaacacgcgcaagatggacaagtccaccatcctacagaaaagcattgac
ttcctgtgcaagcacaaagaaattgcagctcagtctgagtcaagcgagattcgtcaggac
tggaagccgcagttcctcagcaacgaggagtttacacaactcatgctggaggctctggat
ggatttttcctagcaataatgacagacggaaatatcatttatgtgtctgagagtgttact
tccttattggaacacctgccttctgacctggtggaccagaacctcctgaacttccttccc
gaaggggaacactccgaggtgtacaaagccctctcttcccatcccgaaggggaaaacctg
agcctagagtacctcaagaccaagaatcagctagagttctgctgtcatgtgctgaggggc
aacatggaccccaaggagacccaggtctacgaatacgtcaagttcatcggcagctttaag
tctctgcatactggtaacccttctctggtgaccaggaacggcttggagggcgtgctgcag
cgggcactgcgaccagccttcgacgaccaagtgtgtttcatagcaaccgtgaagttggtc
aagccgcagttcatcaaggagatgtgcttagtggaagagcctaatgaagaattcacctcc
agacacagcctggagtggaagtttctcttcctggatcacagggcgcctccaatcataggg
tatctcccatttgaggtgttggggacgtcgggctatgattactaccatgtggatgacctg
gaggcgctagccaaatgccatgagcacttgatgcagtatgggaaggggaagtcatgccat
taccgcttcctgaccaaagggcagcagtggatctggctgcagactcagtactatatcacc
taccaccagtggaactccaggccagagttcatcgtctgcgtgcacacagtcgtcagttat
gctgaggtgagggcggagagacgtcgagggatgggcatagaagaatccccacctcagatc
aatgataagagtcaggactcggagtcgcagctgaacacctccagcctgaaggaggcgcta
gagcgcttcagccggagccgcacaccctcctcttcctcccgcagctcccgcaaatcctcc
cacactgccatctccgacaccaacacctgtggctccacgccctccaagctgcaggtggac
cccagtacatcgccccacccagccgctccatccaccgtcgagatgaactcacagcgccgc
tcttccatcagcaaccagtccatgtgctcccagaccacagctcagagcaccacgtcaact
ctggggcctcagcctccgccccagcagcctccgcctcagcagcagcctcagcctcagcaa
cagcctcagcagcagcctcaacagcagcagcagcagcagcagcagcaggtgcagccagat
gtgcagttcacggcccagctgaatgccatgcagcacctgaaggaccagctagagcagcgc
acacgcatgatcgaggccaacatccagaagcagcaggtggagctgcggcagatccaggaa
cagctgcagcgtgtgcagggcccaggaacgcagatgttcctgcagcagtcagtgggcggt
gggctgaatgtacagctgccccagggtggcacggccgtactgggagcgggcgctcaggcg
ggtatgctgaccatccagtcgggccagcagagcgtcagcagctccgagcaggtggccgga
gcaggccagcacaccaccctcgcccagcatcagcagctgcagcagcagcagcagcaggcg
gcagccccccagcagcaggccttgcagagctccaccctctcacagactcagcatgcatca
cagggtgctctgcccactccgctgtacaacaccatgatgatttcacagcctgcccccgcc
aacgtgatgcccatcgccaccagcctggcacacagtagctcccagggcaccaccatcacc
accttcacccaggaccgacagatcaggtttccagccggtcaacagctggtcactaagcta
gtaacggcccccatgacgtgcggtgcggtgatggtccccaccaccatgttcatgtacaac
cccttcgcccagcagcagggccaggctcaggccatcacgctgcagcaacagcagcagggc
cagccgcaggccgactcgcagacacaggcctcccagggccaggtcacgcagacaggcatc
ccacagcagacgcagcagcaggcgcagttcttgcaggggacccgtctgcttcacagtaac
cagtccactcagctcatcctgcaggcagctttccccattcagcagcagggtaccttcacc
acgaccaccacacaacaaccacagcagcaccgtcaacaaccacaacaacagcgtcaacaa
ccacatcagcagcgtcaacaacaactcaagcctcagactcaaaagcaacacaaaaccctg
tccaatcaccagacagatggtgccagcacccaatcacaataa
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integrated database retrieval system
