Clupea harengus (Atlantic herring): 105908547
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Entry
105908547 CDS
T09045
Symbol
sclt1
Name
(RefSeq) sodium channel and clathrin linker 1
KO
K25400
sodium channel and clathrin linker 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105908547 (sclt1)
Cilium and associated proteins [BR:
char03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
105908547 (sclt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCCAP
Nup49_C
Motif
Other DBs
NCBI-GeneID:
105908547
NCBI-ProteinID:
XP_012692531
Ensembl:
ENSCHAG00000015265
UniProt:
A0A6P8EXS2
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All DBs
Position
22:12409651..12422458
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AA seq
683 aa
AA seq
DB search
MSAENEFRQDQGPRQSAGSGYQDPHISPAMYPQHGDYMGLESPGPLSMDRSIMAPLIAEY
DRHIDDMTRQLQLYQRQMADIKVKLETVIQENERLHSELRASVEKQLQTLPVGSSLDGES
VADDVILKSLKEQLEHSVNEKQWAMEMWQTAVQELERLQKLHQSSVTDGQAQASQHQQLR
NQLVQVQQHLQKLQSVNQKLELTNQQFLKTVTEQSTELEEVRGQLRQAKLDLRTATGKVE
EMTRLLQNVQEQMQRKEEDATEAHGREDASDRRLQQLQTALGQLESRLKAATQEAEQARR
ERVAWERQVGEMQGRCSTLEEEKYEAYDKVRDSIQLAEEASLQKEQAQLREKQKTEELEK
MKEAMKQLVQDAAVRTRKEVENVRKQCNVQIHRMAEELSALQLECADKESQIERSHRERK
AVEEELEKMYREGRSGEPEFRKMEVLHQRCLNAERLKDDMHLTLQSTQTKMKKMDMDYTE
ELSRCQDEVRRMQAALVGARDDCGTISEERLQLQQENQQLRKDMEEQRKASLLVQRKAKQ
QVSHMEQEFSVKEQGLDARLRELEESRQSSSSDLTRLLLAQQKTTNRWKEEAKKLAEAFE
CKLSSLRSELLRQKQRSQELDIQLESDHEKILEYERQVAEFQEKNGRLQRRLSQAEQRAA
TASQQLNILQRRKTASLVDLETL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagaaaacgaatttcgacaagatcaaggtcccaggcaatctgctggcagtggg
taccaggatcctcacatctctccagcaatgtatccacagcatggcgattacatgggcttg
gaatctcctggtcccttgtcaatggacagaagcatcatggctccactcatagcagagtat
gaccgccacatcgatgacatgaccaggcaactgcagctctatcagaggcagatggctgac
atcaaagtgaaacttgaaaccgtcattcaagaaaatgaacgtctgcattcggagcttcgt
gcatcagtggagaaacagctccagacgttgccagtggggtccagcttggatggggagtca
gtggccgacgacgtgatcctgaagagcctaaaggaacagctggaacattcagtcaatgag
aagcagtgggctatggagatgtggcagacagctgtgcaggagctggagaggctgcagaag
ctgcatcagagctctgtgactgatggccaggcacaggcctcccagcaccaacaacttagg
aaccaactagtccaagtccagcagcatttacagaaacttcaaagcgtgaatcagaagctt
gagttgacaaaccagcagttcctgaagaccgtgacggagcagagcaccgagctggaggag
gtgcgtggccagctcaggcaggcgaagctggacctgcggacagccactgggaaagtggag
gaaatgacacgcctcttgcagaacgttcaggagcagatgcagaggaaggaggaagatgcc
accgaggcacatggcagagaggatgcatcagaccgccggctccagcaactccagacggct
ctagggcagctggagagcaggctgaaggcggcgacgcaggaggcggagcaggcacggcgg
gagcgcgtggcatgggagcggcaggtgggcgagatgcagggccgctgctccacgctggag
gaggagaagtacgaggcatacgacaaggtgcgcgactccatccagctggccgaggaggcc
tcgctacagaaagagcaggctcagttgcgggagaaacagaagacggaggagctggagaag
atgaaggaagcgatgaaacagctggtgcaggatgccgccgtgagaacccgcaaggaggtg
gagaatgtcaggaagcagtgtaacgtccagatccatcgcatggcagaggagctgtctgct
ctccagctggaatgcgcagataaagagtctcagatcgagcggtcccaccgggagaggaaa
gcggtggaggaggaactggagaagatgtacagagaagggcgaagtggtgagccagagttt
cgtaaaatggaggtcctccatcagcggtgcctgaacgctgagcgactaaaggacgacatg
cacctcaccctccagagcacacagaccaagatgaagaagatggacatggattacacagag
gagctgtcccggtgccaggatgaggtgcggcgtatgcaggctgcgctggtgggtgcgcgg
gacgactgcggcaccatcagcgaggaacggctgcagctgcagcaggagaaccagcagcta
cgcaaggacatggaggagcagcgcaaagccagcctgctggtccaaaggaaggccaagcag
caggtgtcccacatggagcaggagttctctgtgaaggagcagggcctggacgcgcggctg
cgggagctggaggagagccgtcagagctccagctccgacctcacccgcctgttgctggcc
cagcagaagaccaccaaccgctggaaggaggaggctaagaaactcgccgaggccttcgag
tgcaagctcagcagcctcaggagtgaacttctgagacagaaacagcgttctcaagaactt
gatattcagctggaatccgaccatgaaaagatcctggagtatgagcggcaggtggcggag
ttccaggagaagaacggccgtctgcagaggcgcctgtctcaagctgagcagagagcggcc
acggcctcgcagcagctcaatatacttcagagacggaaaacagcttccctggtggatctg
gagactttgtaa
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