KEGG   Clupea harengus (Atlantic herring): 105908650
Entry
105908650         CDS       T09045                                 
Symbol
chaf1b
Name
(RefSeq) chromatin assembly factor 1 subunit B
  KO
K10751  chromatin assembly factor 1 subunit B
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:char03036]
    105908650 (chaf1b)
Chromosome and associated proteins [BR:char03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     105908650 (chaf1b)
SSDB
Motif
Pfam: Beta-prop_CAF1B_HIR1 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I Beta-prop_WDR35_TULP_N WDR55 CAF-1_p60_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_HPS5 eIF2A B-prop_COPA_B_2nd Beta-prop_DCAF12 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 105908650
NCBI-ProteinID: XP_012692653
Ensembl: ENSCHAG00000014260
UniProt: A0A6P3W9A6
LinkDB
Position
2:complement(14648175..14661535)
AA seq 658 aa
MKVITCEIAWHNKEPVYSLDFQKNPEARIDRLATAGVDTTVRIWRVDKGPNGKACVEFLS
NLSRHTKAVNVVRFCPNKELLASGGDDGVILIWKLNDSKEVEQAPAFHDDDDGQLNKESW
NVLKTFRGHIEDVYDISWTNDGNSMVSGSVDNTAIMWDVNKGQKTCIFNDHKSYVQGVTW
DPLGQYICTLSCDRVLRVYNAHQKKRVHSISKMASSSSAEGEVRNYRMFHDDSMRSFFRR
LSFTPDGSFLLAPAGCVEAGENVTNTTYVFSRKSFKRPVAHLPSPSKATLAVRCCPVYFE
LRTKKGEDGEVKPLPNTLQLPYRVVFAVASEDSIFFYDSQQSLPFGYVSNLHYHTLSDLS
WTKDGLVLAVSSTDGYCSFVTFAEGELGTPLKEQPILKVTTPGSAQEKKGKRNSANGKTA
SPVPRLPSTPVSLEKERVAAAAAAAMASPPPAKPVGSEEKKTPQNRQAKSQPRRITLNTL
TAWSKPSTPKNTGSPSSAPSTPASSAISTVTTPLTTSPDIPKTAPSPPGQSAASTPTSAA
SCTPKTAPSTPCNKKGSSDPLTPLGVANQKSSSSAKGSGPRRISLTSVMMRSPAPSKKSI
TPSSTEKAKHERPSPPSDPLCNPPESKRLKTDSPKPKGSGDPEPEASPGPAQEEPSTV
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgaaggtgataacctgtgagattgcctggcacaacaaggaacccgtctacagtttagat
ttccagaagaaccctgaggccaggattgaccggctggccaccgctggagtggacacaaca
gtcaggatatggcgagtagacaaaggtcctaatgggaaggcctgtgtggagttcctgtcc
aatttgtcgcgccacactaaagctgtaaatgtggtccgcttctgcccgaataaagagctc
ctggcgtctggaggagatgatggagtcattctgatttggaagctcaatgacagtaaggag
gtggagcaggctcccgccttccatgacgatgacgatggacagctcaacaaagagagctgg
aatgttctaaagacctttaggggtcacatcgaggatgtttatgacatatcctggactaat
gatggaaactccatggtgtccggttctgtggacaacactgccatcatgtgggacgtaaac
aagggtcagaagacgtgcatcttcaatgaccacaaaagctacgtgcagggtgtgacctgg
gatcctctgggacagtatatttgcacattaagttgtgacagggtgttgcgtgtgtataat
gcccaccagaaaaagagggtccacagcatcagcaagatggcttcaagctcctcagctgag
ggagaggtgaggaattacaggatgtttcatgacgacagcatgaggtccttcttcagacgg
ttaagtttcactccagacggctccttcctcctggcccctgcgggatgtgtggaagccgga
gagaatgtcaccaatactacatatgtgttctccaggaagagcttcaaaaggccggtcgct
catctgcccagcccttctaaggccacgctagcggtgcgctgctgccctgtctactttgag
ctccgaacaaagaagggagaagatggtgaggtcaaacccttgccaaacaccctgcagctg
ccataccgcgtggtgtttgctgtggcatctgaagactccatcttcttctacgactcccag
cagagtctcccgtttggctacgtctccaacctacactaccatactctcagcgaccttagc
tggaccaaagatggcttagtcttggctgtgtcatcgacagacggctactgctctttcgtc
acgtttgccgagggtgagctcggaacccctctcaaagagcagcccatcctcaaggtgacc
acgcccggctccgcccaggagaagaagggcaaaaggaactcggccaatggcaagacagcc
tcgcctgtaccccgtcttccaagcacacctgtcagtctggagaaggagagagtggctgct
gccgccgccgccgccatggcctccccaccgcctgccaaacccgttggcagcgaggagaag
aagacgccgcagaaccggcaggccaagtcgcagccgcgccgcattaccctcaacacgctg
accgcctggagcaaacccagcaccccaaaaaacaccggctcccccagttcagctccctcc
acccctgcctcctccgccataagcactgttactacgcctcttacaacatcaccagacatc
cccaaaaccgccccctctccccccgggcagtctgcggcaagcaccccaacatcagcagca
tcatgcacccccaaaactgctccatccaccccctgcaacaagaagggctcctcggatccc
ctcacccccctgggagtagcaaaccagaaaagcagcagctctgccaagggttccggtccc
aggcgtatctctctgacatcagttatgatgcgatcacctgctccctctaagaagtccatc
acaccctcttccactgaaaaagccaaacacgagaggccatcccctcccagtgaccctttg
tgcaaccctccagagtccaagcgtctgaagacggattctcccaaaccaaagggatccggc
gatcctgaacctgaagcgagcccaggtcctgcccaggaagagcccagcacggtctaa

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