Clupea harengus (Atlantic herring): 105908668
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Entry
105908668 CDS
T09045
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105908668 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105908668 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105908668 (tra2b)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105908668 (tra2b)
Spliceosome [BR:
char03041
]
Common components
Common spliceosomal components
SR proteins
105908668 (tra2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
105908668
NCBI-ProteinID:
XP_031439809
Ensembl:
ENSCHAG00000014482
UniProt:
A0A6P8GL34
LinkDB
All DBs
Position
2:14699879..14705115
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AA seq
286 aa
AA seq
DB search
MSDNEKEFVGRESRSASRSVSPRRSGKSASHSPAHSPARSKEDSRHSRSKSRSHSRSRSR
SRSHRSSRRYYSRSRSGSRSRHRRSRSGSREYGRRRSHSRSPMSNRRRHIGNRANPDPNN
CLGVFGLSLYTTERDLREVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENNADSREAKER
ANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTYGAPSMSRRSSRDYYDRDGGPLPLTM
VEELTDPAPALAHTPPVITERGYVMIIVLPRKDQWWSVIYGVHSLT
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaacgaaaaagaattcgttggtcgggagtcccgctccgcatctaggagtgtt
agtcccaggcgctctggcaaatctgccagccactccccagcacactctcctgctcgttca
aaggaggactcacgccactcccgctcgaaatcccgctctcactccaggtccaggtcgaga
tcccgttctcaccggagctcccgtcgctactacagcaggtcccgctctggctcgcgctca
cgccatcgccgctcacgctctggcagcagggagtatggacgccgacgcagccacagccgc
tcgccaatgtccaaccgccgtcgccacattggaaaccgggccaaccctgatcctaacaac
tgccttggcgtgtttggcttgagcctgtacacaacagagagggacctgcgggaagtgttc
tccaagtatggcccgctggccgacgtcagtatcgtctacgaccagcagtcgcgtcgctcc
aggggcttcgcctttgtctactttgaaaacaatgcggattccagagaggcaaaggagcga
gccaatggaatggagttagatggtcgcaggatcagggttgactactccatcacaaaaagg
cctcacactccaactcctggaatttacatgggaaggcccacatacggtgcccccagcatg
tcccggcgatcttcacgtgactactatgaccgcgacggaggtccccttccccttactatg
gtcgaggagcttacagatcccgctcccgctctcgctcatactccccccgtcattactgaa
agaggctatgtgatgatcattgttttacccagaaaggatcagtggtggtctgtgatttat
ggtgttcattctttaacttaa
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