Clupea harengus (Atlantic herring): 105908686
Help
Entry
105908686 CDS
T09045
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X6
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105908686 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105908686 (u2af1)
Spliceosome [BR:
char03041
]
Complex A
U2 snRNP components
U2 related factors
105908686 (u2af1)
Complex B
105908686 (u2af1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
RRM_MUD2_C
Torus
zf_CCCH_4
Su_sable_N
Motif
Other DBs
NCBI-GeneID:
105908686
NCBI-ProteinID:
XP_012692704
Ensembl:
ENSCHAG00000000105
UniProt:
A0A6P3W995
LinkDB
All DBs
Position
2:14776884..14784192
Genome browser
AA seq
280 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SADGLRSTVSDVEMQEHYDDFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRKKRHRSRSRSRERRSRSRDRGRGGGGGGAGGGGGGGGGGGGGSDRGGGGGG
GGDRGGGGGDRGGGGGGGGREGGRDRERRRSRDRERSGRF
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatacttggcgtccattttcggaacagagaaagataaagtcaattgctcattt
tacttcaaaatcggagcatgccgtcatggggatcgatgttccagactccacaacaagcca
actttcagccaaactattgccctcttgaatatttaccgaaaccctcaaaactctgcacag
tctgctgatggtctgcgcagcacagtcagtgatgtggagatgcaggagcattatgatgac
ttctttgaggaagtgttcacggagatggaagagaaatacggagaggtggaggagatgaac
gtttgtgataacctcggagatcacctggtgggaaatgtgtatgtaaagttccgtcgtgaa
gaggatgcagagaaagcagtcattgaccttaataaccgctggtttaacgggcaacccatc
catgccgagctgtctccagtcacagacttcagagaagcctgctgtcgtcagtatgagatg
ggggagtgcactcgaggcggtttctgcaatttcatgcacctgaaacccatctcccgggaa
ctgaggcgagagctgtatggccgtcgcaagaagaggcatcgctcacgctcacgatccagg
gaacgccgctctcgctcgcgggaccgtggtagaggaggtggaggaggaggagccggcggc
ggcggtggtggtggtggtggcggcggcggcggcagcgatcgaggtggtggtggtggcggc
ggcggcgatcgaggtggcggtggtggcgatcgaggtggcggcggcggtggcggcggacgt
gaaggaggcagagatcgagagagacggaggtcacgggaccgggaacgttctggaagattt
taa
DBGET
integrated database retrieval system
