Clupea harengus (Atlantic herring): 105908775
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Entry
105908775 CDS
T09045
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105908775 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105908775 (tubgcp6)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
105908775 (tubgcp6)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
105908775 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
105908775
NCBI-ProteinID:
XP_012692792
Ensembl:
ENSCHAG00000020742
UniProt:
A0A6P3W9H5
LinkDB
All DBs
Position
3:complement(27177434..27196223)
Genome browser
AA seq
1970 aa
AA seq
DB search
MSSCQRINNNNCNSSITELVGALCDSSLTGVSWKRRALGSISREGVQRALRRRAYGALLS
KLFQDSSPKPPSPLASTPPRNKMLMISFDLRVCGCPEEAERLEELLGMLKNGPASGLAEL
DSVLELLFQLAGSVPPPPTSFSKDYMRRDRPVLRRIPLGGYQSEELQRLEARAWALVCGE
EWGNLGGLCGSLGLMDALPGTGLLALRQSTEVEERFERDTRLSLFGALQHSRTTDLDVKL
DLPPVPSNADLTGLAIRVPPYLDQSEDEGFQSASNLTPDSQSEPSLSPEVDMWEALRTFE
PGKRRCWESIGCPPGQKVAPYLTEAGRVAFDQLYRLWEGEIRLVSCTQTPSPLPPLPLDS
QTQLVKDLLNVLIGVASTTFPLNQDCVQFDVRFGVCLSGASPESMSRLLSGLALYGTHYL
RLSRFSLQSAHKRGLVFQAFAGGLRRYLHYYRACVLSTPLTFSLLTISFLFRKLGSQLRY
LSELCCVDAESSGGQATFPAGVKLLSYLYNEAQSNSSNENYPVLLSLLKSSCEPYTRFVS
DWVYSGVFRDVYGEFMIQVNEDCLSFRDKHFWTQGYTLISNNVEDCVPVFLRHIASDVYV
CGKTINLLKICCPQHYICGSDVPVPRIAVTFSLQEVEEVERDCAIYRGRMERIAKHSAIS
REEQALRTEQARQELINQVRESAAKTLESIRGLQVSQRLLEEAKKRERFDEMKQQLELEQ
EWRSTAKAKEQQDDFGFARELRDREKRLQALEEQLEERARKELIAQYSRLSEEAAKRERK
AMWRVQRMRLDGQRDSFLQQDQQHIQALLEKCPLGQPGPSLEVFSRPGPALRTAQESPGA
EPQAEQIGAGGVSLTRPPPPPVSISISVPATLASVTTADISDGSQRVDRALQDIGSDLPA
DPASAPHPPPPPPPSSSSLPLADYDFNAPFVPLEDGVHIRPRWDTHPSLSHVHLKEDGTA
EGQEGEEGREGNVPASKQTDAELPESAQEPNTVTGDIRQDKQSECPLSRGGDNTSELSAG
PIHGHPSDAHIKVGENISDVVDAVSFPSGHGHTSDAHIRVGENVSEVQSSLPTANIHGHA
SDAHIRVGENVSEVQSSLPTANIHGHASDAHIRVGENVSEVQSSLPTANIHGHASDAHIR
VGENVSEVIDALPSQSVHGHTSDAHIKVGGNVSEVEAPLPTSDIHGHASDAHIRVGEIVS
KVITVLPSASVHGHASDAHITVGKNVSEVDAPLASQNVHGHSSDANMQVGGFVSDVTSSE
PRWSEHGHASDATLGIGCVVGGTEVIHSLPSTHGHSSDCTLVVGCVVAGVEPLPSPLPGC
AHGHSSDSTLGGGCIVSGIEPQLAPLPGSAYGHSSDSTLGGGCQVSGIEPQMGPLPGSAH
GHSSDSTLGGGCMVSGIQPKLPPLPGSAYGHSSDSTLGGGCMVSGIEPQMGPLPGSAYGH
SSDSTLGGGCMVSGVEPLPSPLPGSAHGHSSDSTLGGGCMVSGSEPHLVPLPGSAYGHSS
DSTLGVGCVVKGPKPGSALQKGDGDAPSTDLQNNQDSGYGLIGLPAFLDEGLTAWAQGLG
LSPGESPEDDYLLSLASQYEVEQYQDTYNIMTSVSDAQPLQQVMRGPYGLRMDPSLHRAT
DTTAVRLSQMVSLPVLMKHSVTTPLITHVSLVNKAVVDYFFVELGVERHFEALRHFLLME
DGEFAQSLSDLLFEKLGSGQTPGELLTPLVLNSILNKALQYSLHGDSALAANFTFALRYL
PETFHPHAPDSLNCLELRYKVDWPLNIIITDSCMNKYNRLFSFLLQLKHMVWTLRDVWFQ
LKRTARVKGVGGSVQFHQLQLYRHEMQHFVKVIQGYLANQILQVSWSEFTTKLGSVSDLD
AIHRTHADYLNRAIFRGLLTEKAAPVMNIIHSIFSLILKFRAQLISQPWDCQQGEAVHPS
FIAMQQSYNTFKYYSHFLFTVVSKLVNKGYQPHLEDFLLRINFNDYYKDS
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagctgccaacgcatcaacaacaacaactgcaacagcagcatcacagaactggtt
ggggccctgtgtgacagcagcttgacaggagtgtcatggaaacgacgtgcccttggcagc
atttcgcgggaaggagtgcagcgtgctctccgcaggcgggcttatggcgctctgctgtcc
aaacttttccaggacagctcgcccaagccacccagccctctggcctccactcctccgagg
aacaaaatgctcatgatttccttcgacctacgggtgtgtgggtgcccggaggaggcagag
cggttggaggagctgctggggatgctaaagaatgggccagcgtctgggctggctgagctg
gactccgtgctggagctcctgtttcagctggctggctctgtgccccctccacccacctcc
ttcagcaaggactacatgcggcgggacaggccagtgctgcgcaggattccactgggcggc
taccagagtgaagagctccagagactggaggccagggcctgggcactggtctgtggtgag
gagtggggcaatctagggggtctctgcggctcgttgggactgatggacgccctaccaggg
acaggacttctggccttaaggcagagcaccgaggtggaggagcgctttgagagggacacc
agactgtcgcttttcggagccctgcagcactcccgcacaacagacttggacgtcaagctg
gacctgcctcctgtgcccagcaacgccgatctgaccggtttggctatcagggttcctcca
tacttggaccaatctgaggatgagggtttccagtcggcttccaaccttactccagactcg
cagtcggagcccagtctcagccccgaggtagacatgtgggaggccttgcgcacctttgag
cctgggaaacgccgctgctgggagtctataggctgtccgcctggtcagaaggtggctcca
tacctgacagaggcaggcagggtggccttcgaccagctctaccggctgtgggagggggag
atcagactggtgagctgcactcagaccccctcccctctgccgcctctgcccctggactct
cagacccagctggtgaaggacctccttaacgtgctgatcggagtggcctccaccacgttc
cccctcaatcaggactgtgtacagtttgatgtgcgctttggcgtgtgtttgtcgggggcc
tctcctgagagcatgtcccggctgctcagcgggctcgcactgtacggcacacactaccta
aggctcagccgcttctccctgcagagtgcccacaaacgaggcctggtcttccaggccttc
gctggtggtctgaggcgatacctgcactactacagagcctgtgtcctgagcacaccgctg
acattcagccttctcaccatcagcttcctgttccgcaagctcggcagccaactaaggtac
ctgtcagagctgtgctgtgtggatgcagagtccagtgggggccaggcaaccttccccgcg
ggagtgaagctgctctcctacctgtacaatgaggcgcagagcaacagcagcaatgagaac
taccctgtgctgctgtctctgctgaagagcagctgtgagccctacacacggtttgtgtca
gactgggtgtacagcggcgtgttcagagacgtctacggagagttcatgatccaggtgaac
gaggactgcctcagcttccgagacaagcatttctggactcaaggatacactctcatttcg
aacaacgtggaggactgcgttccagtcttcctgaggcacatcgccagtgacgtgtacgtt
tgtgggaagaccatcaacctgctgaagatctgctgtcctcagcactacatctgtgggtcg
gacgtgcccgtgccgcgcatcgccgtcaccttctcgctgcaggaggtcgaggaggtcgag
cgcgactgcgctatctaccgcggccgcatggagcgtatcgccaagcacagcgccatcagc
agagaggagcaggccctacgcacggagcaagcacggcaggagctcatcaatcaggtcagg
gagtcggcggccaagacgctggaaagcatccgaggcctgcaagtgtcacagcgcctgctg
gaggaagccaagaagcgggagcgttttgacgagatgaagcagcagctggagctggaacag
gagtggcggagcacggccaaggcgaaggagcagcaggacgacttcggtttcgcccgtgag
ctgagggaccgcgagaagaggctgcaggccctggaggagcagctggaagagagggccagg
aaggagctgattgcccagtacagccgactttcggaggaggcggccaagcgcgagaggaag
gccatgtggagggttcagaggatgaggctggacgggcagagggacagcttcctccagcag
gaccagcagcacatccaggccctcttagagaaatgtcctcttgggcagccagggccgagc
ctggaagtgttttcccgtccggggccagctctgcgaacagctcaggagtccccgggcgct
gagccacaggcggagcagatcggagccggtggggtgtcgctcacccgtcctcctcctccc
cccgtctccatctccatctcagtccctgccaccttggcgtccgtcaccactgcagacatc
agcgacggcagccagcgggtggaccgggcactgcaggacatcggctcggatctcccagca
gaccctgcttccgctccccaccctcctcctcctcctcctccttcttcctctagtcttcct
ctagccgactatgacttcaacgcaccctttgtcccgctggaggacggcgtccacatccgc
ccccgctgggacacccacccgtccctctcccacgtccatctgaaggaagacggcacagct
gagggacaggaaggagaagagggcagggaggggaacgttccagcctctaagcagacagat
gcagaactaccagaatcggctcaggagcccaacaccgtaacaggggacattagacaagat
aagcagtctgagtgtcctttgtctcggggtggtgacaatacctctgagctctctgcgggt
ccaattcacggacatccctcagacgctcacattaaggtgggtgaaaacatttcagatgtg
gtggacgctgtctcattccccagtggtcatggtcacacctccgatgcccatataagggta
ggagaaaatgtttcagaggtccagagttctctccctacggctaacattcatggccacgcc
tccgatgcccatataagggtaggagaaaatgtttcagaagtccagagttctctccctacg
gctaacattcatggccacgcctccgatgcccatataagggtaggagaaaatgtttcagaa
gtccagagttctctccctacggctaacattcatggccacgcctccgatgcccatataagg
gttggggagaacgtgtcagaggtgattgatgccctcccttcccaaagtgtgcatggccac
acctctgacgctcacattaaagttgggggaaatgtttcagaggttgaggctccacttcct
acatcagacattcacggacacgcctctgacgcccatataagggtaggagagatcgtttcc
aaggtgattaccgtcctcccatctgccagtgttcacggccatgcatctgacgctcacatc
acggtgggcaagaacgtgtccgaggtggacgccccgcttgcctcccagaatgtccacggg
cactcctccgacgccaacatgcaggtgggcggcttcgtgtcagacgtgacctcctcagaa
ccccgctggagcgaacatggccacgcctccgacgccacgctgggcatcggctgtgtggtg
ggaggtactgaggtcatccattccctgcccagtacccatggccactcctctgactgtacc
cttgtggtcggctgtgtggtggctggagtagagcccctgccatccccgctgccgggctgt
gcccacggccactcgtccgactccaccctcggcgggggctgcatagtgtcgggcattgag
cctcagctggcccccctgcctggcagtgcctacggccactcgtccgactccaccctggga
gggggctgccaggtgtcaggcattgagcctcaaatgggccccctgcctggcagtgcccac
ggccactcgtccgactccaccctgggcgggggctgcatggtgtcgggcattcagcctaag
ctgccccccctgccaggcagtgcctacggccactcgtccgactccaccctgggagggggc
tgcatggtgtcgggcattgagcctcaaatgggccccctgcctggcagtgcctacggccac
tcgtccgactccaccctgggtgggggctgcatggtgtctggagtagagcccctgccatcc
ccgctgccgggcagtgcccacggccactcgtccgactccaccctcggcgggggctgcatg
gtgtcaggcagtgagcctcatctggtccccctgcctggcagtgcctacggccactcgtcc
gactccactctgggtgtggggtgtgtggtgaagggccccaaacctggcagtgcgctacag
aagggtgatggggacgccccatctactgacctgcagaacaaccaagactctggatatggc
ctcataggtctgcctgctttcctggatgaagggctgaccgcctgggctcaggggctgggc
ctctcccctggtgaaagccctgaagacgactacctcctctccctggcctcccagtatgag
gtggagcagtaccaggacacctacaacatcatgacatcggtctctgacgcccagcccttg
cagcaggtgatgcggggcccctacggcctccgcatggacccctccctgcacagggccacg
gacaccacggccgtgcgtctcagtcagatggtgtcccttcctgtactgatgaaacactct
gttactacgcccctcatcactcacgtgtctctggtcaacaaggcggtggtagattacttc
tttgtggagctgggcgtggagcggcacttcgaggccctgcggcacttcctcttgatggag
gacggagagttcgcacagtccctcagcgacctgctctttgagaagctgggcagtgggcag
acccctggagagcttctgactcctctggtcctcaactccatcctcaacaaggcgctgcag
tacagcctgcatggagacagcgccctggcagccaacttcacgttcgcgttgcggtacctt
ccggaaaccttccacccacacgcccccgactccctcaactgcctggagctacgctacaag
gttgattggcccttgaacatcatcatcaccgacagctgcatgaacaagtacaatcgcctc
ttctcattcctgctgcagctcaagcacatggtgtggaccctgcgggacgtctggttccag
ctcaagaggaccgcgcgggtgaaaggcgtgggcggttcggtgcagttccatcagctgcag
ctctacaggcatgagatgcagcactttgtcaaggtcattcagggctacttggccaaccag
atcctgcaggtgtcctggagcgagttcaccaccaagctgggcagcgtcagcgacctggac
gccatccaccgcacccacgctgactacctcaacagagccattttcagggggctgctgacg
gagaaggctgctccagtcatgaacatcatccacagcatcttcagcctgatcctgaagttc
cgtgcccagctcatctcccagccctgggactgccagcagggggaggcagtgcaccccagc
ttcattgctatgcagcagtcctacaacaccttcaagtactactcccacttcctcttcaca
gttgtctccaaattggtcaacaaagggtaccagccacacctggaggacttccttctgcgc
atcaacttcaatgactactacaaggactcctga
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integrated database retrieval system
