Clupea harengus (Atlantic herring): 105908782
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Entry
105908782 CDS
T09045
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 20
KO
K09609
a disintegrin and metalloproteinase with thrombospondin motifs 20 [EC:3.4.24.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105908782
Peptidases and inhibitors [BR:
char01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
105908782
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
GON
TSP_1
ADAMTS_spacer1
Pep_M12B_propep
Reprolysin
TSP1_spondin
ADAMTS_CR_2
TSP1_CCN
Reprolysin_5
ADAMTS_CR_3
Reprolysin_3
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
105908782
NCBI-ProteinID:
XP_031421068
Ensembl:
ENSCHAG00000018032
UniProt:
A0A6P8EXT5
LinkDB
All DBs
Position
3
Genome browser
AA seq
1907 aa
AA seq
DB search
MQFAIWLVGLMCHLSALVRNSRTYQLHPKQESFIKQLSSYEIITPLRINDFGESFPHKLH
YKRKRRSTDPDFTSLRAHYRIDAFGQRFHLNLSADSGFIAPSYTVTHLGLEHRNDSNTDL
NDDMRHCFFRGHVNAKTEFQAVFSLCTGLIGTFTTHNGEYFLEPLKQADGKEYQEEHNKP
HLVYRHERKTTGPASSDSKPCAASEEHPNHHISLQSDRGMGQEVNSLWETVALHHPSSSS
SHTNESQALPHSRRKRFLSYPRFVELMVTADAKMVRHHGRNLEHYILTIMSVVAAIYRDP
SVGNLINVLVVKLIVLHNEQEGPTINFNAANTLHKFCVWQQGQNEADDNHPSHHDTALLI
TREDICRAKDKCDTLGLAELGTMCDPLRSCSISEENGLSASFTIAHELGHVFNMPHDDYP
KCMEAGTKKQFHVMAPVLNYDTSPWSWSKCSRKYITEFLDTGYGECLLDEPVGRTYNLPT
QLPGQLYDANRQCEFMFGPGSRVCPFMKPCKRLWCTSAEGDHKGCRTQHMPLADGTECGH
GMHCRHGMCVNRELNMRPVDGEWGPWGPYSVCSRTCGGGTKSTARDCNRPEPQNGGKFCV
GRRMKFRSCNTEPCPRGRKDFREEQCSHFDGRHFNMNGLPPTVRWVPKYSGIIMKDRCKL
FCRVAGTMAYYPLKDRVIDGTPCGPDTYDICVQGLCRQAGCDHVLNSKARNDKCGVCGGD
NSSCKTLAGTFNNAQYGYNVVVRIPAGATNIDIKQVSFSGTAEDNNYLALSDSQSNSLLN
GNFVVAMFKREVTFKGTPIEYSGSNTTVERINCTERIEAELILQVLCVGDLYNPDVRYSF
NIPIVEHQEQFVWDPSGSWQECNRMCQGERRRKAGCVRKSDRLVVSEQRCEHLPRPGSIT
DPCNTHCELRWHVAGKSECSTKCGPGYRTLDVQCMRYSVAKRQSDRVESRACSDVPKPQT
REPCHGDCLLKSWQYSAWSPCSKSCGRGARSRESYCMNNLGRRLVDRECSEHQRPVTESC
NDMPCPGWSNSEWSECMVSCGKGHRHRQVYCVLGEEKLSEQHCDSSTKPSPVGSCERPDC
ASWQVGVWSGCAVTCGHGYQMRAVRCVSGPYGNTVDDRECNAAARPRDNQECELPACPRS
APVLSTVRPLVPGQFLTQWRYGSWATCSVSCGKGKRARYVSCRDAQGGVADESYCAHLTR
PPETSACFSPCGQWRAGEWSACSATCGAGHSTRQVVCSNYHQQVDESFCHPDERISTEQE
CAASPCTSAYQPRSNNPPYSPHDPGYHPGHSTWNVPSAANQWRTGPWGACSSTCEGGFQR
RVVVCQDAEGRGTNHCDERVKPDESKRCDSGPCPLWNYGIWGECTQTCGGGRRTRLVVCQ
RPNGHRLNDQNCDVLDKPPDVEPCNHQPCPGSASWHRRPWKPCSVTCGRGTKQRDIVCVY
QNLTQIEDEHCSHLSRPRSQKACRAGACPSWKANRWRECSVTCGIGVQSREVYCRLKGTG
RVSEDLCDARLRPATGQPCLSPDCHHHMWAAEEWHDCNATCGEGLRSRNVLCVDTRMNPV
PNSMCDPLTKPPLHQPCHRAACEYMWMTGAWTQCSASCGIGYQRRMVSCSAVPSSTDPRP
YTAEALSAHSQCPGPQPLDTQQCRIRECPATLHWKVGPWSKCSQTCGAGVMERWVECLTS
KHLPSKACSPSERPESRAACRLRECEVFSTCREVQIREGLRKDGEHYLKVKSRILQIYCA
EMHTSFPKEYVTLRSGQTDNFSEVYAYRLQNPFECPFNGSRRQDCQCRNDYPAAGYTLFS
RVRLDISSMRIITTDLQFTQTVLGRPVPFATAGDCYSAAKCPQGQFSINLTGTGLQVAEA
TKWVSQGNYVSVKVHRSEDGTRIYGRCGGFCGKCIPHPHSGLLVQVQ
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgcaatctggctggttggactaatgtgtcatctgtcagcactcgtccggaac
tcgcgaacatatcaattacatcctaagcaagaaagtttcatcaaacagctgtcatcttat
gaaattatcaccccactccgcataaacgattttggagagtctttccctcataaactgcac
tacaaacggaaacgcagaagtacggatccggacttcacgagtttgagggctcattacaga
atagacgccttcggacagcgattccatctaaacctatccgcggattcgggttttatagct
ccctcatacactgtgacacatttaggattggagcacaggaacgactccaatacggacctc
aacgatgatatgcggcattgtttcttcagaggacatgtcaacgccaaaacggaatttcaa
gcagtcttcagtttgtgcactggtcttattggaacgttcacgacccacaatggggaatat
ttcctagagcctctgaaacaagcagatgggaaagaataccaggaggagcacaacaaacct
cacctagtgtacagacacgagaggaagacgaccggtccagccagcagcgactccaaacct
tgtgccgcttcagaggagcacccaaaccaccacatatccctccagagtgacaggggtatg
ggacaggaggtgaactccttatgggaaacagtagctctccatcacccctcctcctcctct
tcacacactaatgaaagtcaggcgctcccccactcacggcggaagcggttcctgtcctac
ccgcggttcgtggagcttatggtgacagccgatgccaaaatggtccgacaccacggccgg
aacttagagcactacatcctaacaatcatgtcagtagttgctgccatctacagagatccc
agtgtggggaacctcatcaatgtcctggttgtgaagttaatcgtccttcataatgagcag
gagggtccgaccatcaacttcaacgcggccaacaccctgcacaaattctgtgtgtggcag
caggggcagaacgaggcggacgacaaccacccatcccaccacgacaccgcgctcctcata
accagggaggacatatgccgggcgaaggacaagtgtgacacgttggggctggccgagctg
gggactatgtgtgatccattacggagctgctccatcagcgaggagaatggtctgagtgca
tccttcaccatcgcgcatgagcttggccacgtcttcaacatgccccatgacgactaccca
aaatgcatggaggcgggtacgaagaaacagttccatgtcatggcaccggtgctgaactat
gacacaagcccctggagctggtccaaatgcagccgcaagtacatcacagagtttctggac
actggatatggggaatgtctgctggatgagcctgttggcagaacatacaacctccctacc
cagctcccgggccaactctatgatgccaaccgacagtgtgaattcatgtttggaccagga
tccagagtttgcccctttatgaaaccctgcaagcgtctctggtgcacgagtgcggaggga
gaccataaaggctgtcggacccaacacatgcccctggctgatggcactgagtgcgggcat
ggaatgcactgcagacatgggatgtgtgtgaatcgtgagctgaacatgaggcctgtggat
ggggagtggggcccctggggaccctacagcgtgtgctccaggacctgtggaggaggaacc
aagagcacggccagagactgcaacagacctgagccccaaaatggtgggaagttttgcgta
gggcgccgaatgaaattccgctcgtgcaacactgagccatgtccacgaggtcggaaggac
ttccgcgaggagcagtgctcgcatttcgacggcaggcacttcaacatgaacggtctacct
cccacggtgcgctgggtccctaagtacagcggcattattatgaaggatcggtgcaagctg
ttctgtcgcgttgctgggacaatggcttactatccactgaaagatagagtcatcgacggg
acaccttgtggtccagacacttacgacatctgtgttcaaggcctctgcaggcaagccgga
tgtgaccacgtcctcaactccaaggcgaggaatgacaagtgtggcgtgtgtgggggggac
aactcctcctgcaaaaccctggctggcacattcaacaacgctcagtatggttataatgta
gtggtgcgcattcctgccggggcaaccaacatcgacataaagcaggtcagcttctctggg
acggcggaagataacaactacctcgctctgtcggacagccagtccaactccctcctgaac
ggtaacttcgtggtggccatgttcaagagggaggtcacctttaaggggactcccatcgag
tacagcggctccaacaccacggtggagcgcatcaactgcaccgagcgcatcgaggccgag
ctcatcctgcaggtcctgtgcgttggggacctgtacaacccagatgtgcgctactctttc
aacatccccatcgtggagcaccaggagcagtttgtgtgggacccgtctggctcctggcag
gagtgtaaccgcatgtgtcagggtgaacggaggcgcaaagcgggttgtgtgcggaagagc
gatcgcttagttgtatcagaacaacgctgtgaacatctgcctagacctggcagtataact
gacccctgcaatacacactgtgagctcaggtggcacgtggcagggaagagcgagtgctcc
accaagtgtgggccgggctaccgcacgctggatgtgcagtgcatgaggtacagcgtggcc
aagcggcagagcgaccgcgtggagagcagggcctgctccgacgtccccaaaccccagacc
cgggagccgtgccacggagactgtctgctgaagagctggcagtacagtgcctggtctccg
tgctctaagagctgtggccgaggcgcccgctcgcgggagtcctactgcatgaataacctg
ggccgcaggctggtggacagggagtgcagcgagcaccagaggccggtcaccgagagctgc
aatgacatgccctgccctggatggagcaacagcgagtggagcgagtgtatggtgtcgtgt
ggtaagggccacagacacaggcaggtgtactgtgtcctgggggaggagaagctgagtgag
cagcactgtgactccagcactaagccctctcccgtgggcagctgtgagcggcctgactgt
gcctcctggcaggtcggggtctggagcggatgtgccgtgacttgtggccatggttaccag
atgcgggctgtgcgctgtgtgtccggtccctacggcaacactgtggatgaccgtgagtgc
aatgcagctgccaggccccgagacaaccaggagtgtgagctgcccgcctgtccacgctcc
gcacccgtcctcagcacagtgcggcccttagtccctggtcagttcctcacacagtggaga
tatggctcctgggctacgtgctcggtctcctgtgggaagggcaagcgtgctcgctacgtg
agctgcagggacgcccagggaggcgtagctgacgagtcctattgtgctcacctcacccgg
cccccggagacctccgcctgcttcagcccctgtggccagtggagagctggagagtggtct
gcttgctcggcgacatgtggggctgggcactccacccgacaagtggtatgcagcaactac
caccagcaggtggacgagtccttctgccacccggacgagaggatcagcactgagcaggag
tgtgctgccagcccatgcacctccgcctaccagccacgctccaacaacccgccctactcc
ccgcacgacccaggctaccaccccggccacagcacctggaatgtgccctcagctgccaac
cagtggaggacggggccctggggagcgtgctccagcacctgtgagggaggcttccagcgg
cgtgtggtggtgtgtcaggatgccgagggccgcggcaccaaccactgcgacgagcgggtc
aagccggacgagtctaagcgctgtgactcaggcccctgtccactctggaactatggcatc
tggggagagtgcacgcagacgtgtggtggaggccggcgcacgcggctggtggtgtgccag
cgacccaacggacatcggctgaacgaccagaactgtgacgtgctggacaagccgcccgat
gtggagccctgcaaccaccagccctgcccgggcagtgcttcctggcacaggcgaccgtgg
aagccgtgttctgtgacctgcggcagagggaccaagcagagagacattgtctgtgtatac
cagaacctcacccagatagaggacgagcactgcagtcatctgtcaagacccaggtctcag
aaggcttgcagggctggggcatgccccagctggaaagccaacaggtggagggagtgttcc
gttacttgtggaatcggagtccagagcagagaggtgtattgccgcctgaagggcactggt
cgagtctctgaggatctgtgcgacgcccgcctgcggccagccactggccagccttgcctg
tccccagactgccaccatcacatgtgggcagcagaggagtggcacgactgtaatgcaaca
tgtggcgaggggctgaggagccgaaatgttttgtgcgtggacacgagaatgaaccctgtt
cccaacagcatgtgtgaccccttaacaaagccccccttgcaccagccctgtcacagagct
gcctgcgagtacatgtggatgacaggagcatggacacagtgttcagccagctgtggcatt
gggtatcagcgaaggatggtgtcctgttcagcggtgccctcatccaccgacccacggccc
tacactgccgaggctctctccgcccactcccagtgcccagggccccagcctctggacacc
cagcagtgccgtatcagggagtgtccggccacccttcactggaaagttggcccatggagc
aaatgctctcagacatgcggcgctggggtgatggaacgctgggtggaatgcctgacctcc
aaacacctcccctccaaggcctgcagtccgtccgagaggcctgagtccagagccgcctgc
cgcctgagagaatgtgaggtgttctcaacttgccgagaggtccagatcagggaaggcttg
aggaaagatggggaacactacctgaaagtcaaatccaggatcctgcagatctattgtgct
gaaatgcacaccagcttcccaaaggagtacgtcacacttcgtagtggacagacagataac
ttctctgaagtgtatgcgtacaggctccagaacccatttgaatgcccatttaatggcagc
agaaggcaggactgccagtgcaggaacgactacccggcagcgggctacacgctcttcagc
agggtgcggctggacatcagctccatgcggataataaccacggacctgcagttcacccaa
actgtgctgggtaggccggtgcccttcgctacggcgggggactgttacagtgcagccaaa
tgccctcagggccagtttagtataaacctcaccggaactggactgcaggtcgccgaggca
accaaatgggtctcccagggcaactatgtctcagttaaggtgcacaggtctgaggacggc
accagaatctatggccgctgtggcggcttctgtgggaagtgcatcccccacccgcactct
ggcctccttgtccaagtccagtga
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