Clupea harengus (Atlantic herring): 105908870
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Entry
105908870 CDS
T09045
Symbol
top2b
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 2-beta
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
char03032
]
105908870 (top2b)
03036 Chromosome and associated proteins [BR:
char03036
]
105908870 (top2b)
Enzymes [BR:
char01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
105908870 (top2b)
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Topoisomerases
105908870 (top2b)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
105908870 (top2b)
Centrosome formation proteins
Centriole proteins
105908870 (top2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
105908870
NCBI-ProteinID:
XP_031441565
Ensembl:
ENSCHAG00000005470
UniProt:
A0A6P8H2Z2
LinkDB
All DBs
Position
19:complement(6678356..6716990)
Genome browser
AA seq
1642 aa
AA seq
DB search
MSNGAAGSGGLTWVTLFDKKNAASKEEAANGHGDGPRSDGKEGGKKDGSKKMSVERVYQK
KTQLEHILLRPDTYIGSVEPVTQQMWVFDEEIGMNSREITYVPGLYKIFDEILVNAADNK
QRDKNMSTIKINVDPESNTVSIWNNGKGIPVVEHKDEKMYVPALIFGHLLTSSNYDDDEK
KVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWQNNMTKTSDPKIKFFDGDDFTC
VTFQPDLTKFKMEKLDKDIVAIMTRRAYDIAGSCKGVKVMLNGKKLPVTGFRSYVDLYVK
DKLDETGVTLKVVNESVNERWEVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQIVSK
LIEVVKKKNKAGVNVKPFQVKNHVWVFVNALIENPTFDSQTKENMTLQTKSFGSKCQLSE
KFVRSATNCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAGGKHSSDCT
LILTEGDSAKTLAVAGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEINNIIKIVGL
QYKKSYEDPESLRSLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHTFLEEFITP
IVKVTKSKQALSFYSIPEFDEWKKQTENFKTWHIKYYKGLGTSTSKEAKEYFADMERHRI
MFRYGGTEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYGQQTKYLSYN
DFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCMKRNDKREVKVAQLAGSVAEMSA
YHHGEQALMQTIVNLAQNFVGSNNVNILQPLGQFGTRIQGGKDAASPRYIFTMLSPLAKL
LFPSVDASLLKFLWDDNQKVEPEWYIPILPMVLVNGAEGIGTGWACKIPNYDVREIVNNI
NRMLKQQDPMPMLPSYKNFKGIIHELGQNQFLMSGEVSVLDKNTIEITELPVRTWTQAYK
ESVLEPMLQGTEKTPALINDYKEYHTDATVKFVVRMTEEKLAQAEAAGLHKVFKLQSSLT
CNSMVLFDHMGCLKRYESVQDILKEFFELRLHYYKLRKDWLMGSLGADAAKLSNQARFVL
EKIEGKISIENKAKKDLIRMLVQRGYESDPVAAWNRAQEKALEEDDGSDSDSSVDSGSSS
GPNFNYILNMPLWCLSKEKVDDLLKQRDAKKVELDDVQLKSPDDLWKADLAVFVEELDRI
EEQERESAIMGKAPKLVKGKVGKPKSRKMELEETLPSPFGRRIEPQVSQAIKAEAAKKSS
KKKKGDVTDVKLEFDEDGEVTGENSLVSPSAQGSAPPPPAANPKTPRVRKEKKEPSTPRE
KKTPTPKGSSGKKVKKRNPWSDDDSKSDSDLEEAEHIVIPRETKSQRASAVKAKYTFDFS
EEEDRDGGGDDDDDQEEDGRSSPVRSFGDSFSTPQSKEPYNNNTNEEENDDEDDIFTPKP
SSKSSTPAAKKREPVKTIPSKPAFSDKSSDSDGGKSDSGEDNGPIFSSYSSSSAFEKPTS
AKKAKKPTEPSASKPKRAPAKPRPKPQPQPQPQPKPDTSVWDSDSDTGAKKTTPPALKGK
GRGKKRKQQSDSEAEDYSPMKKAGKTPAPRQKKKAPSEDEDEPEVKSLSRSDPSRDRPGR
SRKEVKYFAESDDEEVEDDMFD
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggagctgcaggaagcgggggtttgacttgggtgaccctctttgacaagaaa
aatgcggcgagtaaggaggaggcggccaacggccacggagacgggcccaggagcgatggc
aaggagggggggaagaaggacgggtccaagaagatgtctgtggagcgcgtgtaccagaag
aagacgcagctggagcacatcctgcttcgcccagacacctacatcggctccgtggagcct
gttacccagcaaatgtgggttttcgatgaagagattggcatgaactcgcgagagatcact
tacgtcccaggactgtacaaaatctttgatgagattctcgtgaacgcagcagacaacaag
cagagggacaagaacatgtccaccattaaaatcaacgttgacccagagtccaacaccgtc
tcgatctggaacaatgggaagggcatccccgtggtggagcacaaagacgagaagatgtac
gtccctgccctcatcttcggccacctcctcacctccagtaactatgacgacgacgagaag
aaggtcacaggtggcaggaacgggtacggtgccaaactctgcaatatcttcagcaccaag
ttcaccgtggaaacggcgtgcaaagagtataaacacagcttcaaacagacctggcagaac
aacatgactaagaccagcgaccccaagatcaagttcttcgacggggacgacttcacgtgc
gtgacgttccagcccgacctgaccaagttcaaaatggagaaactggacaaggacatcgtg
gccattatgacccgccgggcctacgacatcgccgggtcctgcaaaggagtcaaggtcatg
ctcaacggcaagaagcttccggtgaccgggttccgcagctacgtggacctgtatgtgaag
gacaagctggacgagaccggcgtgaccctgaaggtggtgaacgagtcggttaacgagcgc
tgggaggtgtgcctgactctcagcgaaaagggcttccagcagatcagcttcgtcaacagc
atcgccaccactaaggggggcagacatgttgactatgtcgtggaccagattgtgtcaaag
ctgatcgaggtggtgaagaagaagaataaggctggtgtcaacgtgaaacccttccaggtg
aagaaccacgtgtgggtgtttgtgaatgcgttgatcgagaaccccacgtttgactcgcag
accaaggagaacatgactcttcagaccaaaagcttcggctccaaatgccagctctcagag
aagttcgtccgctcggccacgaactgcggtatagtggagagcatcctgaactgggtgaag
ttcaaggcccagacgcagctcaataagaagtgctcgtccgtcaagcacagcaagatcaag
ggcatccccaaactggacgacgccaatgatgcaggggggaagcactcgtcggactgcacg
ctgatcctgacggagggagactcggctaagactctggccgtggcggggctgggggtgatc
ggccgagaccgatacggtgtctttcccctcaggggcaagatcctcaacgtacgagaggcc
acacacaaacagatcatggagaacgccgagatcaacaacatcattaaaatcgtgggtctc
cagtacaagaagagttacgaggaccccgagtctctgcgatcgctccgctacggcaaaatc
atgatcatgaccgatcaggatcaagatggttctcacatcaaaggtcttctcatcaacttc
ttccaccacaactggccttctttactcaaacacaccttcctcgaagagttcatcacgccc
atcgtcaaagttaccaagagcaaacaggcactgtccttctacagcatcccagagtttgac
gagtggaagaagcaaacagagaactttaaaacatggcacataaagtactacaaaggtttg
ggtaccagcaccagtaaagaggcgaaggagtactttgcggacatggagagacaccggatc
atgttccgctacgggggcacagaggacgacgccgccatcacactggccttcagcaagaag
aagacggacgacaggaaggagtggctgaccaacttcatggaggacaggcggcagaggagg
atgcatggcctgcccgagcaatatctttatggacaacaaaccaagtacttgtcctacaac
gatttcatcaacaaagagcttattctcttctccaactcggataatgagcgatccattcca
tccctggttgatgggctgaaaccggggcagaggaaagtgctgttcacctgcatgaagagg
aacgataagagggaggtcaaagtggcacagctggccgggtctgttgctgaaatgtctgcc
taccatcacggcgagcaagcgctcatgcagaccatcgtcaacttggcccagaacttcgtc
ggcagcaacaacgtcaacatcctgcagcccctgggtcagtttggtacccgaatccaaggg
ggcaaggatgctgccagtccccgttacatcttcaccatgctcagtcccctggcgaagctg
ctgttcccttcggtagacgccagcctgctgaagttcctctgggacgacaaccagaaggtg
gagcccgagtggtacatccccatcctccccatggttctggtcaacggagccgagggcatc
ggaaccggctgggcctgcaagatccccaactacgacgtgcgagagatcgtcaacaacatc
aaccgcatgcttaaacaacaggaccccatgcccatgctccccagctataagaactttaag
gggattatccatgagctgggtcagaaccagttcctgatgagtggggaggtgtcggtcctg
gacaagaacaccatcgagatcacagagcttcccgtcagaacctggacacaggcctataag
gaatctgtgctggagccaatgctgcaggggactgagaagaccccggccctcatcaatgac
tataaggagtaccacacggacgccaccgtcaagttcgtggtgcgcatgaccgaggagaag
cttgcccaggcagaggctgcaggactgcacaaggtcttcaagctgcagtcgtcactcacc
tgcaactctatggtgctgtttgatcacatgggctgcttgaagcggtacgagtccgtgcag
gacatcctgaaggagttcttcgagctccgcctccactactacaagctgcgaaaggattgg
ctgatggggagcctgggggcggacgctgctaaactgtccaatcaggcgcggttcgtcctg
gagaagatcgaggggaagatttctatcgagaataaggcgaagaaggacctgatccgcatg
ctggtccagaggggctacgagtccgacccagtagctgcatggaacagagcgcaggagaag
gccctggaggaggatgacggcagtgacagtgactcctcggtggattctggctcttcttct
gggcccaacttcaactacatcctcaacatgcccctgtggtgcctgtccaaggagaaggtg
gacgacctgctcaagcagagagacgccaagaaagtggagctggatgatgtgcagctgaag
tcccccgacgacctgtggaaggcggacctggctgtctttgtggaggagcttgatcgcata
gaggagcaggagagggagagtgcgatcatgggcaaggcacccaagctggtgaagggcaag
gtgggcaagcccaagtctcgtaagatggagctggaggagacgcttccctcgccgttcgga
cggcgcatagaaccgcaggtgtcccaggccatcaaggccgaggccgccaagaagagcagc
aagaagaagaagggtgatgtgacggacgttaagctggagtttgacgaggacggtgaggtg
acgggagagaactccctcgtctctccgtcggctcaagggtccgcccccccaccccccgcc
gccaaccccaaaaccccccgcgtcaggaaagagaagaaggaacccagcacccctcgcgag
aagaagaccccgactcccaaaggctcctcgggcaagaaggtgaagaagaggaacccctgg
tctgacgacgactccaagtccgacagcgacctggaagaggccgaacatatcgtcatcccc
agggaaaccaagtcccagagagcctcagcggtgaaagccaaatacacgttcgacttctct
gaggaagaggatcgcgacggcggcggcgacgacgatgacgaccaggaggaagacggccgc
tcgtcgccggtgcgttcctttggcgacagcttcagcacaccccagagcaaagagccgtat
aataacaacaccaacgaggaagagaacgacgacgaagatgacatcttcaccccgaaaccg
tcctccaaatcgtctactccagcagctaagaagagggaacccgtgaaaaccatcccctcc
aaacctgccttctctgacaagagcagtgatagtgacggtgggaagtccgacagcggcgag
gacaacggccccatcttctcgtcctactccagcagctcagcgttcgaaaaaccaacctct
gctaaaaaagccaagaagccgacggaaccatcggcctccaaacccaagagagctccggcc
aaacccagacccaaaccccaaccccaaccccaaccccaacccaagcccgacacctcggtc
tgggactccgactcagatacaggggccaagaagacaacaccaccagcactcaaaggtaaa
ggccgaggcaagaagaggaagcagcagtcagactccgaggctgaagactacagcccaatg
aagaaggccgggaaaaccccagcacccaggcagaagaagaaggccccctcagaggatgag
gacgagccggaggtgaagtctctcagtcggtcagatccgtctcgcgaccgacccggacgc
tcccggaaggaggtgaagtacttcgcggagtccgatgacgaggaggtggaagacgacatg
tttgactag
DBGET
integrated database retrieval system
