Clupea harengus (Atlantic herring): 105908893
Help
Entry
105908893 CDS
T09045
Name
(RefSeq) uncharacterized protein LOC105908893
KO
K27704
microtubule cross-linking factor
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105908893
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
105908893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
Striatin
Motif
Other DBs
NCBI-GeneID:
105908893
NCBI-ProteinID:
XP_031432810
UniProt:
A0A6P8GCM4
LinkDB
All DBs
Position
11:24921894..24941784
Genome browser
AA seq
1935 aa
AA seq
DB search
MLTDDTMNPAASGAADSRQADNSNKKQHRASSPARFRDTTPKSATKSPTTSKPVASKQSG
KNSRGSSPVTVTGGKDKQSGKGAAAVHPSGAESPTLKRAETSKKIEQLSNSSDDANDLEP
SSVKGETNRVVSDQPCSSKSSQAKGKNLKAEAAASSSKPTTKTSVGCGPGFWRDGCLQSE
LIQFHLNKSLKNGGKMHTKTASPPVAELEPSLEATDAALIPPQNQEMQDEIEKLLDENED
LKCEIEEMRTEMDEMRDTFYEEDACQLQDMRRELERANKNCRILQYRLRKAERKRMRYAQ
TGEIDGDLLRSLEQDLKVAKDVSVRLHNELENVEEKRTKTEEENERLRQQLIEVEITKQA
LQNELDKAKEHKRKGKDGQKKSSQTPTEEENEDLKCQLAFIKEEAVLMRKKMAKIDKEKD
RLEQELHKYRSFYGDVDSPLPKGEAGGPPTTRESELKLRLRLVEEEANILGRKIVELEVE
NRGLKAELDNMRGEELGAGGLADPVAREQSEALSELRQQLQLVEDEAELLRRNLADVEEQ
NQRVTTELNKLKYKAGTHESSRHGSGGAAAAAADAAKVEALQEELKSARLQINELSGKVM
QLQYENRVLLSNMQRYDLASHLAIRASPRDSDAESDSGRRESDDDSSRLPPHRKREGPIG
GESDSEEVRNIRCLTPTRSLYSPESRFLPRSLKDRQQMMDIRMEAERLSRTIDRLIADTS
TIIAESRVYVTNGERFGRMEEDEDGGRIREHELLYRINAQMKAFRKELQTFIDRLEVPKP
EDREAEEPLSQDEKIQEVLRFSCMGYSYSHAFEYLQQMPWHPHITKVGPGHCNINYSMWN
AFGNGSGLHGGGGGHVGKAQGWEFVPCSRLDRERGRGNSRSPLRTLSPSIPVGHFYEQPI
PGLGAAVASESTRGQVPRHELQTQQSRLKKKIEDLKKRRGQDREEWMREKEGLLRQMADI
QGGENRRILLDLKSILDEVQLEVKREETKRSELQLQYMKDRCGWELERADLKCRIAQLEV
RECGSSVETAKASERSAETGGTLRREQQEQKRLLADTHTVAMDLRCRMEHSERGWVRERS
ELLERFDLERKEWESQLRDMQRKIEELYGEVKPRRDPGDVGQNAEALTSARLSMQSASTG
SSVLTDPSDAHSSSYSDSTRQHSQSRGGGDLSVRLSNSRDNNSSSRSSSRGEAGTRSGAH
SEAKVDRRAATSAERQEIDAGIDSAELEDILQGCLGPKLERHPSLAGQERLLNPYGDLQN
MEIRCGTDKRNTIALNAALNEIARVSEELCSYQDEIRRKSDIKRNCTESLYFPEELERME
NERNKMEMDKTFFSLNQWCRELQDIDEHGWISPKGAIKETNTIEPEIRSPPRQSPEAPPV
PPRSTSWYMNSPPLLEPEFSVPEPRVDRKCPSPCVHLDRKCNSPSIVRKFEAMLQENEGK
MLTTSGIVPCTVPVDSKCNISCCHSRWSCDGSRFGSSKSSTYVPVQKCLSELNIPSTGVD
YRQDHKAAGTQKGPGEHLSPLGPDLPGKDIHVDVSLPTLDILPTQGRAITPRRNAMLEQK
TAEFNRTLFQAEMGRGYDNKESVSPADMSTSSTPQQPKVNPRDVNVDIRPPPHVMEVKHK
EGPTTGLKYPKSHYAEVKLEEASFELPVQYHEATLKQVASELTPQYPVVRVRDKIHPSTR
NPPEMKPRSVAALDRQPECKQKREVNPFSSEQSVTAMTQLCASVTVTPIQSRRVEPPSAA
LAGGAQHPLETRPRQPETTKLDLPKTRSRILNENPWKPTTLAAYPRPVDSRSNYGAIERI
LKSYECSSQTPPPPTPSPGKEDDLIELMDMLDMEHHARSGQRLTHTTQRQATTHKETHVT
VQKSKESSVTSRKSFSRPACPANRRLPSRWASRSPSASSTSSSSASSSPITQLSVVSTQK
QTFSYAAFHTETVIY
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atgctcacagatgacaccatgaaccctgccgcaagcggcgctgccgactcccgacaggca
gacaatagcaacaaaaagcaacaccgggcttcatccccagccagattcagggacaccact
cccaagtctgccaccaaaagcccaacgacatccaaacctgtcgcttcaaagcaaagtgga
aagaacagccgaggtagctctccggtcacggtgaccggtggcaaggacaaacagtctggg
aaaggcgcggcagctgtccaccctagtggtgctgaaagtcccactttgaaaagggcggag
acgagcaagaaaatcgaacagcttagcaactcgtcggatgatgctaatgatttggaaccg
agttctgtgaagggagagacgaaccgtgtcgtttctgatcaaccgtgttcatcaaaatcc
tcccaagcaaaaggcaaaaatctgaaagcagaggcagcagcgagcagcagcaaaccgacg
accaagacaagtgtagggtgtgggccaggcttttggagagacggatgcttacagtctgaa
ttgatacagtttcatctcaacaaaagcttgaaaaacggaggcaagatgcacacgaagaca
gcaagccctccggttgcggaactggagccgtcgctagaagctaccgatgcagcgttgatc
cctccgcagaaccaagaaatgcaggatgaaattgagaaactgttagacgaaaacgaggac
cttaagtgtgaaattgaagagatgcggacagaaatggacgaaatgcgagacacattttac
gaggaggatgcttgtcagctgcaagacatgagacgcgagttggagagagccaataagaac
tgcaggatcctccagtaccgcttgcggaaggcggagaggaagcggatgcgttacgcacaa
accggtgaaatagatggcgatctcctcaggagcttagagcaggacctaaaggtggcaaag
gatgtgtctgtgagactgcacaatgagctggagaatgtggaggagaagaggacaaagaca
gaggaggagaatgagcgactcaggcagcagctaattgaagtggaaatcaccaagcaggcc
ttacagaatgaactggacaaggccaaagagcataaacgcaaagggaaagatgggcagaag
aagtcttcacagaccccaacagaggaggaaaatgaagatctgaagtgtcaactggccttc
atcaaggaggaagctgtcctgatgaggaagaagatggcgaagatcgacaaagagaaggac
cgcctggagcaagagctgcacaagtaccgctccttctacggggacgtggatagccctctc
cctaaaggcgaggccgggggtcccccgaccacccgcgagtccgaacttaaactgcgcctc
cgcttggtggaggaggaggccaacatcctggggcgcaagatcgtagagctggaggtggag
aaccgcggtctcaaggcggagctggacaacatgcgaggggaggaactgggggcagggggc
ctggcggacccggttgcccgtgagcagagtgaggcgctctctgagctccggcagcagttg
cagctggtggaggacgaggctgagctcttacgccgcaacctggccgacgtggaggagcag
aaccagcgcgtgaccacagagctcaacaagctcaagtacaaggctgggacccacgagagc
tcccgccacgggtccggaggggcggcggctgctgctgcggacgcagcaaaggttgaggcg
ctacaggaggagctcaagtcggctcggctgcagatcaacgagctgagtggcaaagtgatg
cagctgcagtacgagaaccgcgtgctgctgtccaacatgcagcgctacgacctggcctcg
cacctggccatccgcgccagcccccgtgacagcgacgccgaaagtgacagcgggcgtcgc
gagagcgatgacgactcgtcccgcctgccgccacaccgcaagcgcgagggtcccatcggc
ggtgagagcgactcggaggaggtgcggaacatccgctgcctcacgcccactcgctccctc
tactcgcccgagagccgttttttaccccgaagccttaaggaccgccagcagatgatggac
atccgcatggaagcagagaggctaagcaggaccattgaccggctcatcgcagacaccagc
accatcatcgctgagtcccgcgtctacgtgaccaacggcgagcgtttcggccgcatggag
gaggacgaagatggcggccgcatccgcgagcatgagctgctgtaccgcatcaatgcccag
atgaaggccttcagaaaggagctccagaccttcatagaccgcctggaggtgcctaagcct
gaggacagggaagcagaagagcctctgtctcaagatgagaagatacaagaggtgttacgc
ttttcatgcatgggctacagttattcacacgcctttgagtatttgcaacaaatgccttgg
catccacacataacaaaagttggacctggacattgcaacataaattacagtatgtggaat
gcgtttggaaatgggtcagggttgcacggaggtggcggtggacatgtgggcaaagcacaa
ggttgggaattcgtcccatgctccaggttggatagggagaggggaaggggcaatagccgt
agtccgctccggaccctctcaccgtcaattcctgtcggtcatttttacgaacagcccata
cctggacttggagcggccgtggcatccgaatcaacccgggggcaggtcccccggcatgag
ttacagactcaacaatctcgcctgaaaaagaaaattgaggacttaaaaaagcgccgtgga
caggacagagaagaatggatgagggaaaaagaaggacttttgagacaaatggccgatata
caaggaggggaaaatagaagaattttgttggatctgaagtcgattttggatgaagttcag
ctggaggtgaagagagaagaaacgaaacggagcgagctgcaattgcagtacatgaaggac
cgatgcggatgggagctggaacgagcagacctgaaatgccgtattgcgcagttggaggtt
agagagtgtggctcatctgtggagacggcgaaggcgagcgagaggagcgcggagaccggg
ggcacgctgaggagagagcaacaggagcagaagaggctcctggccgacacgcacacggtg
gccatggacctgcgctgccgcatggagcacagcgagcggggctgggtgcgcgagaggtcc
gagctgctggagcgattcgacctggagaggaaggaatgggagagccagctccgagacatg
cagaggaagattgaggagctgtatggtgaggtgaagccccgccgggacccgggtgacgtc
gggcagaacgcagaggccctcacctcggcccggctcagtatgcagtcagccagcaccggc
tcaagcgtcctcactgacccctccgacgcgcacagcagcagctactccgactcgacccgt
cagcacagccagagccgtgggggcggggacctgtcggttcgccttagcaacagccgcgac
aacaacagcagcagccgcagcagcagcagaggggaagcagggacgcgtagcggtgctcac
agcgaggccaaggtcgaccggcgggctgccacgtcagcggagcgtcaggagattgacgcg
ggcatcgactcggccgagctggaggatatcttgcaggggtgtctggggccgaagctggag
agacacccctccctcgctgggcaggagaggctcctcaacccctacggtgacctgcagaac
atggagatccgctgtgggaccgataagaggaacaccatcgccttgaatgccgctctcaat
gaaatagcccgagtgagtgaagaactgtgcagctaccaggatgagatcaggaggaagtct
gacattaaaagaaactgcacagaatcgctgtactttccagaggagttggagaggatggag
aatgagaggaacaaaatggagatggataaaaccttcttcagcctgaaccagtggtgtagg
gagctccaggatattgacgaacacggttggatcagtccaaaaggcgctatcaaggagaca
aacacgatagaaccagaaatcagaagccccccgaggcagtcgcccgaagccccgccggtt
ccacctcgtagcacgtcctggtatatgaacagtccccctctgctagaaccagagttcagt
gtcccagaaccccgcgtggacaggaagtgtcccagtccatgtgtccatttggacaggaag
tgcaacagcccctccatagtgcgaaagtttgaggcgatgctgcaggagaacgaggggaag
atgttgacgacttctgggatcgtcccatgcacagtgcctgtagattccaagtgcaatatc
agttgctgccacagccggtggtcctgcgatggaagcaggtttggcagcagcaagtcatct
acatacgtgcctgtccagaaatgcctgtcagagctaaacataccatcaaccggagtggac
taccgccaagaccacaaagcagccgggacccaaaaaggccctggggaacatctcagcccc
ctgggcccagatctccctggaaaggacatccatgtggacgtaagcctgcccactttagac
atcctccccacccagggcagggccataacccctcggagaaatgcaatgctggagcagaag
actgcagagttcaaccgcactcttttccaggccgaaatggggcggggctatgataacaag
gagagtgtcagccccgcagacatgtctacgagttccactccacagcagccaaaggtcaac
cccagggatgtgaatgttgacattaggccaccaccccatgtcatggaggtcaaacataaa
gaggggccaacaacagggctgaaataccccaagtcacattatgcagaggtgaagctcgag
gaggcaagtttcgagcttccagtgcagtaccatgaggccaccctgaagcaggtggcttca
gagctcacgccacagtaccctgtggtgagagtcagggacaagattcacccctcgactcga
aaccctccagagatgaagccaaggtctgtagcagcgcttgaccgccagccagagtgcaag
cagaaaagagaggtgaatcccttctcatctgagcaaagtgtaaccgcgatgacacagctt
tgcgcgagtgtgacagtgacccccatccaatccagaagggttgagccacccagtgctgca
ttggcagggggagcccaacaccccttggagaccaggccaaggcagccagagaccaccaag
ctggacctgcccaaaaccaggtcgcggatcctgaacgaaaacccctggaaacccaccacc
ttggccgcgtaccctcggcccgtggactccaggtccaattacggtgccatcgagcggatt
ctgaagagctatgagtgctcgtctcagacgccgccgcctcccacgcccagccctgggaag
gaggacgacctcatcgagctcatggacatgctggacatggagcaccatgccaggtccggt
cagagactcacacacacaacgcaaagacaggcaactacgcacaaagagacacatgtgaca
gtacagaaaagcaaagagtccagcgtgacctccaggaagagcttctcccggcctgcctgc
cccgccaaccgacgcctcccctctcgctgggcgagccgttctccttccgcgtcgtccacg
tcctcctcgtccgcctcatcctcgccgatcacccagctgtctgtggtctccactcagaag
cagaccttctcctacgccgccttccacactgagacggtcatctactga
DBGET
integrated database retrieval system
