Clupea harengus (Atlantic herring): 105908918
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Entry
105908918 CDS
T09045
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
105908918 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105908918 (myo5b)
04131 Membrane trafficking [BR:
char04131
]
105908918 (myo5b)
03029 Mitochondrial biogenesis [BR:
char03029
]
105908918 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105908918 (myo5b)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
105908918 (myo5b)
mRNA cycle factors
P-body specific factors
105908918 (myo5b)
Membrane trafficking [BR:
char04131
]
Others
Actin-binding proteins
Myosins
105908918 (myo5b)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
105908918 (myo5b)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
105908918 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Fez1
Myosin_N
nSTAND3
AAA_22
NPHP3_N
AAA_16
Ac76
CowN
NB-ARC
Motif
Other DBs
NCBI-GeneID:
105908918
NCBI-ProteinID:
XP_031434354
Ensembl:
ENSCHAG00000024021
UniProt:
A0A6P8G4Z7
LinkDB
All DBs
Position
12:complement(24703641..24771136)
Genome browser
AA seq
1845 aa
AA seq
DB search
MSVNELFTKYTRVWIPDPEEVWKAAEIVRDYKEGEPILHLKLEDESPLEYAIGPKHNQLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLHIYG
EEVINAYSGQNMGDMDPHIFAVSEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVGGSYNDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDRRFHIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASANRPEFKDLALSSAEEFLYTSMGENIFIEGVN
DAHDFEKTKEAFSLLGFKDSYQTGIYKIMASILHLGNVEIKAERDGESCHISSDDPHLHH
FCRLLGVEKEQMEHWLCRRKLVTTSETYVKTMSKAQASNACHALAKHIYAHLFDWIVENI
NRALHTTEKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQDEYMK
EQIPWTLIDFSDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYGRHSSSEHFQK
PRMSNRSFIVIHFADKVEYQCDGFLEKNRDTVYEEQINILKASKFQLVADLFQEGKEPTV
PSFSSSKGSRINVRAAKTVPKLPNKEHRKTVGHQFRSSLHLLMDTLNATTPHYVRCIKPN
DFKEAFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLMKKSDMAIGDK
KQVCRKLLETLIKDPDKFQFGKTKIFFRAGQVAYLEKLRADKFRNACIKIQKTVRGWLQR
TRYRKIRKSAITLQRYGRGYMARRHAEQLRLSKAALVCQKQYRMVRVRREYLKTRQAVIT
IQAFTRGMFIRRLYQEFLMHHKATVIQKHVRGWMVRRRFRQARTAAIIIQCAYRRVLAKR
RFKQLKIEARSAEHFKKLNVGMENKIVQLQRKVDDQGKEYKTQNEQLTVSKNALNTEVTK
LQKELETLRSRQDDGTQLNSLQEELERLRAELKEAHGHRKRLEEAHGSEKLGLEQRVEEL
EKENLLLKGEKEEMNEKILSDSRSTDQKLSVSQRESRLQADLDEERQRYQNLVKEFSRLE
LRYDNLQEEVSLAKFHPGHRRNLSNQSSLGSESPYPSFTPSDVGDTDDALQQVEDMGVEK
AAMDISLFMKLQKRVRELEQERKRLHSSLEKMEELANRKGIEPKGSTPEDDSIADYNILK
RQELESENKKLKNDLNELRKAVADRATKSNGSNELQEGYNLLLNQLKAANEELEVRKEEV
LILRTQIVSNSKKADTDNHIQKSNNVPEWSNNKKPVDKEEALQAYQGLCEAKSKGDDWGY
LNEDGELGLAYQGLKQVARLLEAQLQTQSRQHKDELVALHTQIEVLREDLEKKQEVLGQI
MALSPEDKVEFSVQQEITRLTNDNLDLKELMEKLEKNERKLKKQLRIYMKKVQELEVPAS
KGRPELTRQVTLQRKEKDFEGMLEYYKDDESMLIRTLITDMTPNTVSATVPCLPAYILFM
CIRHADYINDDQKVHSLLTSTINAIKKVLKRNNDDFEMTSFWLANTSRLLHCLKQYSGDE
AFMTQNSAKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLIKVAEGIMQPMIVSAMLESESI
PSLSGVKPMGYRNRSSSMDTEGGGAGGYTLEALIRQLGQFHGTMGEHGLDPEIGQQVVRQ
LFYSINAVTLNNLLLRKDVCSWSTGMQLRYNISQMEEWLRGRNLQQSGAVATLEPLIQAA
QLLQVKKKTSQDAEAICSLCAALSVQQIVKILNLYTPLNEFEERVTVSFIRDIQNRLPER
VEGQHHLLVDTKHTFPVLFPYTPSALGLENMHIPASLSLDFLVRV
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcaacgagctttttactaagtacacgcgggtgtggatccccgacccggaggag
gtatggaaggcggccgagatcgtccgcgactacaaggagggcgagccgatcctgcacctc
aaactcgaggatgagtcgcctctagagtacgccatcgggcccaagcataaccagcttccg
tttctgcgtaaccctgatattctggtcggggagaatgacctcaccgccctcagctacctg
cacgagccggccgtgctccacaacctcaaggtgcgcttcctggagtccaaccacatctat
acctactgcggaatcgtcctggtggccatcaacccgtacgagcagctgcatatctatggg
gaggaggtcatcaatgcctacagcggccagaacatgggggatatggacccccacatattc
gccgtgtctgaggaggcctataagcagatggccagggatgagaagaatcagtccatcatc
gtcagcggagagtccggggcagggaagaccgtctccgccaagtacgccatgcgctacttt
gccactgtgggcggctcgtacaacgacaccaacgtggaggagaaagtgctggcgtcaagc
cccatcatggaggccatagggaacgccaaaacgactcgcaacgacaacagcagccggttc
gggaagtacatccagatcggctttgacagacgcttccacatcattggtgccaacatgcgc
acgtatctgctggagaagtcacgagttgtgtttcaggcggaggaagagaggaactaccac
atcttctaccagctctgtgcttctgccaatcggccagagttcaaagacctggctttgagc
agcgcagaagaattcctctacacctcaatgggagagaacatcttcatcgagggagtgaac
gacgctcacgactttgagaagacgaaagaggccttctcattactaggtttcaaagacagc
taccagacaggcatctacaagatcatggcctccatcctgcacctggggaacgtggagatc
aaggcggagcgagacggagagtcctgccacatctctagtgacgacccccacctgcatcat
ttctgccgcctgctgggcgtggagaaggaacagatggagcactggctgtgccgcaggaag
ctggtgaccacgtccgagacctacgtcaagaccatgtccaaggcgcaggccagcaacgcc
tgccacgcgctggccaagcacatctacgcacacctcttcgactggatcgtggagaacatc
aaccgggcgctgcacaccaccgagaaacagcactcgttcatcggggtgctggacatctac
ggatttgaaacgtttgagatcaacagttttgagcagttctgcattaactacgccaacgag
aaacttcagcagcagttcaactcgcatgtgttcaaactggagcaggacgagtacatgaag
gagcagatcccctggactctcatcgacttctccgacaaccagccgtgtatcgatctcatc
gaggctaagctggggatcctggacctcctcgacgaggagtgcaaggtgccaaaaggaacc
gaccagaactgggcccagaagctgtacggacgccactccagcagtgagcacttccagaag
cccaggatgtccaaccgctccttcattgtgatccactttgctgataaggttgagtatcag
tgtgatggatttctggagaagaacagagacactgtctatgaagaacagatcaatattctt
aaagccagcaagttccagctagtggcagatctcttccaggagggcaaagagcctacagtt
ccctcgttctcctccagcaagggttccaggatcaatgtgcgtgctgccaaaaccgtcccc
aaactccccaacaaagagcacaggaaaacagtgggccaccagttccgcagttccctccat
ctcctgatggacacgctgaacgccaccacccctcactatgtgaggtgcatcaaacccaac
gacttcaaagaggccttctcgttcgactccaggagggctgtccaacaactgcgagcatgt
ggcgtcctggagaccatccgtatcagtgccgctggatacccgtccagatggacgtatcca
gacttcttcagccgataccgggtcctcatgaagaagagcgatatggccataggggacaag
aagcaggtgtgcaggaagctgttggagactctgatcaaggaccctgataagttccagttt
ggcaagacaaagatcttcttcagggccgggcaggtggcctatctggagaagctccgggca
gacaagttccgcaacgcctgcatcaagatccagaagacggtgcgaggatggctgcagagg
acgcgctacaggaagatccgcaagtccgccatcaccctgcagagatacgggcggggttac
atggcacgcaggcatgcggagcagctgcgcctctccaaggccgctctggtgtgccagaag
cagtaccgcatggtccgcgtgcgccgcgagtacctgaagacgcggcaggccgtcatcacc
atccaggccttcacccggggcatgttcatccgcaggctctaccaggagttcctgatgcac
cacaaagccaccgtcatccagaagcacgtgcgcggctggatggtgaggaggcgcttccgc
caggcccgcaccgccgccatcatcatccagtgcgcctaccgccgggtgcttgccaaacgg
cgcttcaagcagctgaagatcgaggcgcgctccgccgagcacttcaagaagctcaacgtg
ggcatggagaacaagatcgtccagctgcagaggaaggtggacgaccagggcaaagagtac
aagacccagaacgagcagctgaccgtgagcaagaacgctctgaacaccgaggtcaccaag
ctgcaaaaggagctggagaccctgcgcagtcgccaggacgacggcactcagctgaactcc
ctccaggaggagctggagaggctgagggccgagctgaaggaggcccatggccacaggaag
agacttgaggaggcgcacggcagtgagaaactgggactggagcagagagtcgaggagctg
gaaaaggagaatctgctgctgaagggagagaaagaggagatgaacgaaaagatcctgagc
gactccaggagcacagaccagaagctgagtgtgtctcagagggagagcaggcttcaggca
gacttggatgaggaacgtcagcgctaccagaacctggtgaaggagttctcccgcctggag
ctgagatatgacaacctgcaggaggaggtctctctggccaagttccacccaggccaccgg
aggaacctgtccaatcagagcagcctgggctccgagtccccctacccctccttcaccccc
tccgacgtgggcgacacggacgatgccctgcagcaggtggaggacatgggcgtggagaag
gcggccatggacatcagcctgttcatgaagctgcagaagcgcgtgagggagctggagcag
gagaggaagaggctccacagcagcctggagaagatggaggagctggccaaccgcaagggt
attgagcccaaaggctccaccccagaggacgattccatcgccgactacaacattctcaag
aggcaggagctggagtcggagaacaagaagttgaagaacgacctgaacgagctgcgcaag
gcggtggccgaccgcgccacgaagagcaacggctccaacgagctgcaggagggctacaac
ctgctcctgaaccagctgaaggccgccaacgaggagctggaggtgcgcaaggaggaggtg
ctcatcctgcgcacacagatcgtcagcaactccaaaaaggctgacaccgacaaccacatt
cagaagtccaacaacgttcctgaatggagcaacaacaagaagcctgtggacaaggaggag
gccctgcaggcctaccagggcctgtgcgaagcaaagagtaaaggcgatgattggggttat
ttgaatgaagacggagagctgggtctggcataccagggattaaagcaggtggccagactg
ctggaggcccagctgcagacccagtctcgtcagcacaaggatgagctggtggcgcttcac
acccagatcgaggtgctccgcgaggacctggagaagaagcaggaggtgctgggccaaatc
atggccctctcgcccgaggacaaggtggagttcagcgtacagcaggagatcacgcgcctc
accaacgacaacctggacctcaaggagctgatggagaaactggagaagaacgagcgcaag
ctgaagaaacagctgaggatctacatgaagaaagtacaggagctggaagtgccggcctcc
aaggggcgtccggagctgactcggcaggtgacgttgcagaggaaggagaaggacttcgag
ggcatgctggagtactacaaggacgacgagtccatgctgatccgcactctcatcacagac
atgacccccaacactgtgtcggccaccgtgccctgcctgcctgcctacatcctcttcatg
tgcatccgccacgctgactacatcaacgacgaccagaaggtccactcgctgctcacctcc
accatcaacgccatcaagaaagtcctcaagagaaacaacgatgactttgagatgacctca
ttctggctggctaacactagccgccttctgcactgcctgaagcaatacagcggagatgag
gctttcatgacccagaactcagccaagcagaatgagcactgtctgaagaactttgacctg
gccgagtaccggcaggtcctgagtgacctctccatccagatctaccagcagctcatcaag
gtggccgagggcatcatgcagcccatgattgtgtcggccatgttggagagcgaaagcatc
cccagcctgtccggcgtgaagcccatgggctaccggaaccgctcgtccagcatggacacg
gagggcggcggggcgggcggctacacgctggaggcgctgatccggcagctgggccagttc
cacggcaccatgggcgagcacggcctggacccggagatcggccagcaggtggtccgccag
ctcttctactccatcaacgccgtcacgctcaacaacctgctgctgcgcaaggacgtctgc
tcctggagcaccggcatgcagctccggtacaacatcagtcagatggaggagtggctgcgg
gggcggaacctgcagcagagcggagcggtggccacgctggagcctctcatccaggcggcg
cagctgctgcaggtcaagaagaagacgtcccaggacgccgaggccatctgctccctctgt
gcagcgctgtctgtccagcagattgtgaaaattctcaacctctacaccccactcaatgag
tttgaggagagagtcactgtgtctttcatccgggacattcagaaccgcctgccggagcgc
gtggaagggcagcaccacctgctggtggacaccaagcacacgttccccgtgctcttcccc
tacacgccctcggccctgggcctggagaacatgcacatccccgcctcgctcagcctggac
ttcctcgttcgagtctga
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integrated database retrieval system
