KEGG   Clupea harengus (Atlantic herring): 105909048
Entry
105909048         CDS       T09045                                 
Symbol
sdha
Name
(RefSeq) succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char00020  Citrate cycle (TCA cycle)
char00190  Oxidative phosphorylation
char01100  Metabolic pathways
char01200  Carbon metabolism
Module
char_M00009  Citrate cycle (TCA cycle, Krebs cycle)
char_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
char_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:char00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    105909048 (sdha)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    105909048 (sdha)
Enzymes [BR:char01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     105909048 (sdha)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Thi4 GIDA Pyr_redox_2 HI0933_like DAO FAD_binding_3
Other DBs
NCBI-GeneID: 105909048
NCBI-ProteinID: XP_012693078
Ensembl: ENSCHAG00000013358
UniProt: A0A6P3W9T7
LinkDB
Position
19:complement(12008718..12017954)
AA seq 662 aa
MASVCTASRVLGKRVLSTKALPAVSQANSRKFHFNINGKRDTAKVSSGISTQYPVVDHEF
DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEGDDWRWH
FYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTDDGKIYQRAFGGQSLKFGK
GGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEDGECRGVIALCMEDG
SIHRFRSKNTVIATGGYGRAYFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYG
AGCLITEGCRGEGGILINSEGERFMERYAPNAKDLASRDVVSRSMTIEIREGRGVGPEKD
HVHLQLHHLPPQQLATRLPGISETAMIFAGVDVTKDPIPVLPTVHYNMGGIPTNYKGQAI
IYKDGQDQVVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRACALTIADVCTPGEKLP
PLKADAGEESVANLDKIRFANGDIRTSEIRMNMQKTMQAHAAVFRTGDVLKEGCEKMDGI
YQTLKDIKTFDRGIVWNTDLVETLELQNLMLNAVQTITSAEARKESRGAHAREDFKDRVD
EYDYARPLQGQEKIPYDDHWRKHTLSFVDPETGKVTLKYRPVIDDTLNMEDCAAIPPAIR
SY
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggcttccgtgtgtactgcctcccgtgtcctcgggaaaagggtgttatcaacgaaagct
cttccagcagtatctcaggccaactccagaaagttccacttcaacataaatgggaaaagg
gacactgctaaagtttcctctgggatctccacacagtacccagtggtggatcatgaattt
gatgcagtggtggtgggagctgggggcgctggcttgcgcgctgcctttggattgtcagag
gctggcttcaacacagcttgcgtcacaaagctcttccctaccaggtctcacactgttgct
gcacagggaggaatcaacgctgcacttgggaacatggagggcgatgattggagatggcac
ttttatgacaccgtgaagggatctgattggctcggggaccaggatgccatccactacatg
actgagcaggccccagccgctgtggttgagctggagaacttcggaatgcccttcagccgc
acggacgacggcaagatttaccagcgtgcttttggtggtcagagtctgaagtttggcaaa
ggaggtcaggcccacagatgctgctgtgtggctgacagaacaggtcactccctcctgcac
actctttatggacggtctctgaggtatgacaccagctactttgtggaatactttgccctg
gacctgctgatggaggacggggagtgcagaggggtgatcgccctgtgcatggaggacggc
tccatccaccgcttcagatccaagaacacagtcatcgccactggtggttatggtcgtgca
tacttcagctgcacctcagcccacaccagcaccggagacggaaacgccatggtgacacgt
gccgggcttccctgccaggatctggagtttgtgcagttccaccccacaggtatctatgga
gccggttgcttgatcacagagggttgccgtggagaaggtggaatcctcatcaacagcgag
ggcgaacgtttcatggagcgctatgcacccaatgccaaagacctggcatcccgagatgta
gtgtcccgctccatgaccattgagatccgcgagggaaggggtgtgggtccagagaaggac
cacgtccacctgcagctgcaccacctgccccctcagcagctggccacccgtctgcccggc
atctccgagacggccatgatcttcgctggcgtggacgtcaccaaagaccccatccccgtg
ctgcccactgtgcactacaacatgggtggcatcccaaccaactacaagggacaggctatc
atctacaaagatggccaggaccaggttgtgcccgggctgtacgcttgcggcgaggctggg
tgtgcatctgtccacggtgccaaccgactgggcgccaactccctactggacctggtggtg
tttggtcgcgcctgcgccctcactatcgccgatgtctgcacaccaggtgagaagctgccc
ccactgaaggccgatgctggcgaggagtccgtggccaacctggacaaaatccgctttgcc
aacggagacatcaggacctccgagatcaggatgaatatgcagaagaccatgcaggcccat
gctgctgtcttccgtactggtgatgtgctcaaggaggggtgtgagaaaatggacggcatc
taccaaacccttaaggacatcaagacctttgacagaggcattgtgtggaacacagatctg
gtggagactctggagctgcagaacctgatgctgaacgccgtgcagaccatcaccagcgcc
gaggcccgcaaggagagccgaggcgcccacgccagagaggacttcaaggaccgtgtggat
gagtacgactacgccaggccccttcagggacaggaaaagataccctatgacgaccactgg
aggaaacacacactatcctttgtggacccagagacaggaaaggtcaccttgaagtacagg
cctgtaattgatgacacattgaatatggaggactgtgcggccatccctcctgccatccgg
tcatattaa

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