Clupea harengus (Atlantic herring): 105909075
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Entry
105909075 CDS
T09045
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
char01100
Metabolic pathways
Module
char_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
105909075
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105909075
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
105909075
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
105909075
Glycosyltransferases [BR:
char01003
]
Glycan extension
O-Glycan
105909075
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
LXG
UPF0449
Motif
Other DBs
NCBI-GeneID:
105909075
NCBI-ProteinID:
XP_031433463
Ensembl:
ENSCHAG00000004650
UniProt:
A0A6P8G085
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Position
12:25563195..25590329
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AA seq
578 aa
AA seq
DB search
MLRRGPLAWLSRVGLVLVLLCCTASLLYVTTCGPHQEDGLGGGNALPRAAGGGGGAGGGG
GGGGGGGGPSGGPTGREGYQALLQEHEDQHRIHIASLKKQIAQLKEALQERGEQLKGVQE
SLERAAGVGRGAGGGGAAAAGGGGDGAPGAAAATNEKSPNADLQEFLRSQLSQAEVHQGT
RLPSEYAVVPFESFTLQRVYQLETGLTRHPEEKPVRKDRRDELGEVIENALQALNAPRTS
GGDRTLSKAYAPSDFIEGIARTEKDKGTLYELTFRGDQKQEFRRLVLFRPFGPLMKVKNE
KVDTAAVVINIVVPLSQRADKFRQFMHNFREVCVRQDKRIHLTVVYFGRDQMSEVKGTLE
NTSREMNFKNFTLIQLNEEFSRGRGLDVGARAWKGGNVLLFFCDVDIVFTADFLNTCRLN
AQAGKKVFYPVLFSQYNPAVIYGSHEHIPPVEQQLVIKKDTGFWRDFGFGMTCQYRSDFI
NIGGFDVDIKGWGGEDVHLYRKYLHSNLLVVRAPSRGLFHLWHEKHCTDQLPPDQYKMCM
QSKAMNEASHGQLGMLLFRHEIEAHLRKQRAQSSAKKA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggcgggggccgctcgcctggctgtcccgtgtcgggttggtgctcgtgctgctg
tgctgcaccgcctccctgctctacgtcaccacctgcggcccccaccaggaggacgggctg
ggggggggcaacgctctgccccgggccgcaggcgggggcggaggagctgggggtggaggc
ggaggcggaggcggaggcggtggtccgagcggggggcccacgggacgcgagggctaccag
gccctgctgcaggagcacgaggaccagcatcggatccacatcgccagcctgaagaagcag
atcgcccagctgaaggaggccctgcaggagcgtggcgagcagctcaagggcgtccaggag
tccctggagcgggccgccggcgttggcaggggcgcaggaggaggaggagcagcagcagca
ggaggaggaggtgatggcgctccgggcgcagcagctgccaccaacgaaaagagccccaac
gccgacctccaggagttcctgcgcagccagctgagccaggcggaggtgcaccagggcacg
cggctgcccagcgagtacgccgtggtgcccttcgagagcttcaccctgcagcgcgtctac
cagctggagacgggcctcacccggcaccccgaggagaagcccgtgcgcaaggaccggcgc
gacgagctgggggaggtgatcgagaacgccctgcaggccctcaacgccccccgcaccagc
ggaggagacaggaccctcagcaaggcctacgccccatctgacttcattgagggaattgca
cggacggagaaggacaaaggcacgctttacgagctgacgttccgtggcgaccagaaacag
gagttccgaaggctggtgctgttccgtcccttcggcccgctaatgaaggtgaagaatgag
aaagtggacacggctgcggtcgtcatcaacatcgtggttccgctgtcccagcgagccgac
aagttccgacagttcatgcacaacttcagagaggtgtgtgtgaggcaagacaaacggatc
cacctcactgtggtgtacttcgggagggaccagatgagcgaggtgaaaggaacccttgag
aatacctccagggagatgaacttcaagaacttcacgctcattcagctgaacgaggagttc
tcgcggggccgcgggctggatgtcggggcgagggcgtggaaggggggcaacgtcctcctc
ttcttctgcgacgtggacatcgtcttcacggcggacttcctcaacacctgccgcctgaac
gcccaggctggtaagaaggtcttttatccggttctgttcagccagtacaaccctgcggtc
atctacggcagccatgagcacattcctccagtggaacagcaactggtcatcaaaaaagac
acaggcttctggagagattttggcttcggtatgacgtgtcagtacagatccgacttcatc
aacataggcggcttcgacgtggacattaaaggctggggcggcgaggacgtgcacctgtac
cgcaagtacctgcacagcaacctgctggtggtgcgcgcgccgtcccgcggcctcttccac
ctctggcacgagaagcactgcaccgaccagctgcctccggaccagtacaagatgtgcatg
cagtccaaggccatgaacgaggcctcgcacggccagctgggcatgctgctcttccgccac
gagatcgaggcgcacctccgcaagcagcgggcacagtccagtgccaagaaggcctga
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