Clupea harengus (Atlantic herring): 105909100
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Entry
105909100 CDS
T09045
Symbol
sgca
Name
(RefSeq) alpha-sarcoglycan
KO
K12565
alpha-sarcoglycan
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105909100 (sgca)
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GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
105909100
NCBI-ProteinID:
XP_012693144
Ensembl:
ENSCHAG00000010867
UniProt:
A0A6P3W9L6
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Position
1:complement(12651956..12658773)
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AA seq
409 aa
AA seq
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MAAPRHWALCLAVCVASFSVAQATKNAPVGQFFVYELQREVYQADFHPVNKIYGQVPNDP
IVFKCNKQFSPDLPGWLRYTQRHAYDNGFLYGTPMDEDKGKNIIEIIAINRQSSETFEDF
VIINVVPRVKLTPFQAEFFLPRREIETVLPSSVQYEIKQDVQKMWGVDDLEFVNITSALD
QGGRVPLPLPGYFEGVYVKLGSEAYFSPCLQGALSPQHGLECEALSRLPGKPFLKVSTDC
SNCAVASNCMEWCRSTLIDLSKPTPPPPAPTMGPGILEPAGEFDPPEDVSPRDFFPDYIV
TVIFPFALALILLLLLSYVMCCRREGLDKRDAMTPELQLYHHHTIVGNTSELRDMAGTRE
GVPPPLSTLPMFSTRTGQRVPAMQRAYQPDSIPLIMAQQEPNVDTLPRK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcctcggcactgggctctctgtctcgcagtgtgtgttgccagcttctctgtg
gcccaagctaccaagaacgcccccgttggccagttctttgtctacgagcttcagagagag
gtctaccaggctgacttccaccctgtcaacaaaatctacgggcaggttcccaatgacccc
atagtgtttaagtgtaataagcagttctcccccgacctcccggggtggctgcgctacacc
cagaggcatgcctatgacaacggcttcctgtacgggacgcccatggacgaggacaagggc
aaaaacatcatcgagataatcgccatcaacagacagtcttcggaaacctttgaggacttt
gtgatcatcaatgtggttccacgagtcaagctgacaccctttcaggcagagttcttcctc
ccgcgaagggaaattgagacagtgctgccctctagtgttcagtatgagataaagcaggat
gtacagaagatgtggggtgtggacgatctggaatttgtcaacatcacgtcggcccttgac
caaggtggccgggtgccactgcccctccctgggtattttgagggcgtgtacgtgaagctg
ggctctgaggcctacttctctccgtgcctgcagggggcgctgtccccacagcatgggctt
gagtgtgaggccctgagcaggctcccaggcaagcccttcttgaaggtgtccaccgactgc
agcaactgcgctgtggccagcaactgcatggagtggtgccgctccaccctgattgacttg
tcaaagccgacccctcctccacccgcccctactatgggtcctggtatcctggaacctgct
ggggagtttgacccccccgaggacgtctctccccgtgacttcttccctgactacatcgtc
acagtgatcttcccctttgcgctggcactgatcttgctcctccttctgtcctacgtcatg
tgctgcaggagggagggccttgacaagcgggatgccatgacacctgagctgcagctgtac
caccaccacactatcgtgggcaacaccagtgagctgcgtgacatggctggtaccagagag
ggggtgcccccgcccctctccaccctacccatgttcagcacccgcacagggcagagggtg
ccagccatgcagcgggcataccagcccgacagcatcccactcatcatggcccagcaagaa
ccaaatgtagacaccctgcccaggaaatga
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