Clupea harengus (Atlantic herring): 105909134
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Entry
105909134 CDS
T09045
Symbol
ercc6l
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105909134 (ercc6l)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
105909134 (ercc6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
DMP19
DUF3502
DUF3223
Motif
Other DBs
NCBI-GeneID:
105909134
NCBI-ProteinID:
XP_012693189
UniProt:
A0A6P3W9Z2
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All DBs
Position
8:complement(8365218..8372141)
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AA seq
1283 aa
AA seq
DB search
MDSPEDSTGSKEEHDILQNITNQFTKSMSIATVDLETYTRKAKEAFKEGNPAKSLEILKE
AYKHFPDEKIKGRIKKLQEFISQMDAQSSDDEDDEFIDVNKSGFMLNKRIYDNLYDHQKE
GVAFLYGLHRDGEKGGVLADDMGLGKTIQVISFLCGMYDSELMQNCLLVMPTTLITNWVR
EFQKWVPGMRVRDFHGTSKVIRAKNLRKIQVKGGVLITSYQMVLNNWELLSAIDGKEFFW
DYVILDEAHKIKTSSTKTAKSMNAVLAKHRVLLTGTPVQNNLRELWSLFDFACQGSLLGT
YKTFKTEYENPITRAREKDATPGEKVLGLKMSGNLMNIIGPYFMRRTKADVLKNGKDDQK
SSEVEEDQLSPTGEGGLEVPPLPQKNDLIVWTYLSPVQEEIYRMFISLDHIKEVLMTTRS
PLAELNIIKKLCDHPRLLSNKAASELGLFTGQDPALPGIENESMANNIDNISDETLISES
GKLEFLIELLEHHREEGNRTLVFSRSLKMLNIIQRILKNRGFKMVRIDGTVTDLSERERR
IGHFQSDPSYTVFLLTTQVGGVGLTLTSANRVVIFDPSWNPATDAQAVDRAYRIGQTKNV
IVYRLITCGTVEEKIYRRQVFKDSLIRQTTGDNKNPFRYFSKQDLKELFTLQDTRSSTTQ
LQLQDLHTKQQSSDPDLMEHIAYLYSKKMFGISHHDLLFCVQPTEDDVENDEESKYIEKR
VLNAENLMKVESQIQRELKDFEYENTEPRSLQQPVRRGRQESVKHRHEDLEQSPEAEPAI
VLDESTSPNTSVTNEVVFDLDSSRTEEIESLQRNRMDDANGVICVDDEANVSAGQIEDPV
VIMEEDNFPERKIDSFTNGIEKDGDYGAEGRKSLVINGSFEGNSSLANGCAITSVNDEAD
MSTDFNLIVEDEEDEEEVSFAESKRASLAYSGEQEGDYEGKNVFPKTNNHSFQGHSSLAS
GDAVSTVDDDEADMSTEYMDDQPVDGDEDCVITKKKRKTFTIHSSEDEGDERSFRADGTG
NVSLPGNSRLSDMNDGSGDMEDKQLSEEEDDVFTKKKRGFIICSSDEEGDDGEGEKSITD
SVSSQGNSRADETNNAPDMSYVEDKLEGEEENDGSGENKSAFLTYSSEEDDDDKGEEKHS
SRTASNTSSQGSSRVVDTNDITSGDDNTNMSAGDIEDQLISDEEDSVIITKKKRAIVSYS
SEEEEECGDDGGGRENSHFSSSLLSVSSVANCSYSSVASRRSLVNNLMEKFEDILMDEDE
SSEEMSGSDQENDLCPSSISVIE
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggattctccggaggactcaacaggatcaaaagaggaacatgatattcttcagaacatt
acaaatcagttcacgaagtccatgtctattgccacagtggatctggagacgtataccagg
aaagcaaaagaagcttttaaggagggaaatcctgcaaaatctctggaaattttgaaggaa
gcctacaaacatttcccagatgagaagattaagggacgaatcaagaagctgcaggagttc
atcagtcagatggatgcacagtcttcagatgatgaggacgacgagttcattgacgtcaac
aaaagtggcttcatgctgaacaaaaggatttatgataatctgtatgatcatcagaaagaa
ggagtggcattcctttatggattgcatcgggatggcgagaagggtggggttctggcagac
gacatgggtttgggcaaaactatccaggtgatctccttcctgtgtggcatgtatgactcc
gagctgatgcagaactgcctgctggtgatgcccactacactcatcacaaactgggtgaga
gaattccagaagtgggttccggggatgagggtgagagacttccatggaacaagcaaagtc
atccgcgccaaaaacctgaggaagatacaagtcaaaggaggtgttctcatcacatcctat
cagatggtgctcaacaactgggagctcttgagcgccattgacgggaaggagttcttttgg
gactatgtcattctagatgaggcacacaagatcaaaacctcatcaacaaaaacggccaaa
agcatgaatgctgttttagccaagcatcgcgtgctcctaactggaacacctgtacagaac
aacctgcgagagttgtggtcactgtttgacttcgcttgccaagggtcactcctgggaact
tacaaaaccttcaagacagaatatgaaaatcccattactagggcacgcgagaaagatgct
acccctggcgaaaaggtgcttggtctgaagatgtctgggaacctcatgaacatcattggc
ccttactttatgcggagaaccaaggcagatgtgctaaagaatggcaaagatgatcaaaaa
tcttcagaggtagaggaagaccagctctcaccaactggcgaaggaggcttagaggtgcct
ccactcccccagaaaaatgacctgatagtgtggacgtacctaagtccagttcaagaggaa
atttacaggatgttcatctctctggatcacataaaggaggtgctgatgaccacacgcagc
cccctggctgagctgaacataatcaagaaactctgtgaccatccaaggcttctctcaaac
aaagctgcaagtgaactcggtctgtttaccggacaagaccccgccttgcctggaatcgag
aacgagagcatggccaacaatattgataacatctcggatgagaccctgatctctgagtcg
ggcaagctggagttcctcattgagctactagagcaccatagggaagaagggaaccgcaca
ttagtgttctcccggtcacttaagatgctgaacatcatacagcgcattttgaaaaacaga
ggattcaagatggtgagaatagatggcacggtgaccgacctctccgagagagagcggcgc
attggacacttccagagtgacccaagctacaccgtcttcctcttgaccacacaagtgggt
ggcgttggactcacactaactagcgccaaccgtgtggtgatctttgaccccagctggaac
cctgccactgatgcccaggctgtggaccgtgcctacaggattggacaaacgaaaaatgtc
attgtgtaccgactcatcacctgtggcactgtggaagagaagatctaccgcagacaggtc
ttcaaggactccttaattcgacagactacaggagacaacaagaatcccttccgttacttc
agcaagcaggacctgaaagaactcttcactcttcaggatactcggtcctccaccactcag
ctgcagttacaggatcttcacacgaagcagcagagctcagaccccgacctgatggagcat
attgcctacctgtactccaaaaaaatgtttggaatctcacaccacgatctcctgttctgc
gttcagccgactgaagatgatgtggagaatgacgaggaaagcaagtacattgagaagcga
gtgctgaacgcagaaaatttgatgaaggtcgagtctcagattcaaagggagttgaaggac
tttgagtacgaaaacactgagccaaggtcactgcagcagcccgtcaggagaggccgtcag
gaatctgtcaaacacagacatgaggacctggagcagtccccagaagcagaacctgccatt
gttttggatgaatctacatcccctaacacctcggttacaaatgaagttgtgtttgacctg
gattcctcaagaacagaggagattgagtcactccagagaaacagaatggatgatgccaat
ggtgttatttgtgtggatgatgaggcaaatgtgtctgctggacaaatagaagaccctgtg
gttattatggaggaagacaactttcctgagcggaaaatagactcttttactaatggcatt
gagaaagatggagactatggggctgagggaagaaagtctttagtaataaacgggtccttt
gaaggaaattccagcttggctaatggttgtgccatcacgtctgtgaatgacgaagcagat
atgtctactgatttcaacctgattgttgaggatgaagaggacgaagaggaagtcagcttt
gcagagagcaaaagagcctctcttgcatacagcggtgagcaagaaggagactatgagggc
aaaaatgtttttcctaagacaaacaaccactcatttcagggacattccagcttggctagt
ggtgatgccgtctccactgttgatgatgatgaggcagacatgtctactgaatacatggat
gaccagccggtagatggagatgaggactgtgttattaccaagaagaaaagaaaaaccttc
actattcactccagtgaggatgagggagatgagaggtctttcagagcagacggaaccgga
aatgtctccctgccgggaaattccaggttgtcagacatgaacgatggatcaggagacatg
gaagacaagcagttgagtgaggaggaagatgacgtctttacaaagaagaagaggggcttc
atcatctgcagcagtgacgaggagggagatgacggtgaaggggaaaagtctataacagac
agtgtctcctcgcagggaaattccagggcggacgagacaaataacgcaccagacatgtca
tatgtcgaggacaaactggaaggtgaagaggaaaatgacggctctggtgagaacaagagt
gcctttttgacttacagcagtgaagaagatgatgatgataaaggtgaggagaagcactct
tcaagaacagccagtaatacctcctcccagggaagttccagggttgttgacactaatgat
atcacctctggagatgacaatacaaacatgtctgctggggacattgaggaccagctgata
agtgacgaggaagacagtgtcatcattactaagaagaaaagggccattgtctcatacagc
agtgaggaagaggaagagtgtggtgatgatggtggtgggagagagaactctcatttctcc
agtagcttgctgtccgtgtcttctgtggcgaattgctcttactcatcggttgcatcgagg
cgctcacttgtaaataatttgatggaaaaatttgaggacattttaatggatgaggatgag
tcgagtgaagagatgtctgggagtgaccaagagaatgatctctgtcctagctcgatcagt
gtgattgaatga
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integrated database retrieval system
