Clupea harengus (Atlantic herring): 105909172
Help
Entry
105909172 CDS
T09045
Symbol
vps51
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105909172 (vps51)
Membrane trafficking [BR:
char04131
]
Protein recycling
Others
EARP complex
105909172 (vps51)
Endosome - Golgi transport
Tethering complex
GARP complex
105909172 (vps51)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec5
VPS51_Exo84_N
Dor1
Vps54_N
COG2_N
EXOC6_Sec15_N
COG5_N
Vps53_N
YxiJ
DUF6290
DUF4239
TMTC_DUF1736
Sec8_N
Motif
Other DBs
NCBI-GeneID:
105909172
NCBI-ProteinID:
XP_012693231
Ensembl:
ENSCHAG00000025001
UniProt:
A0A6P3WA18
LinkDB
All DBs
Position
8:complement(9045292..9050921)
Genome browser
AA seq
832 aa
AA seq
DB search
MDSDQGTGATTPESDRKRKVHGMLKLYYGLNDEGKAVELAESLDPCDINGPHFDPEVYLN
KLRKECSLGDLMDQESCMVKQIRSLDSDMQTLVYENYNKFISATDTIRKMKNDFKKMEDE
MDCLSANMAAITEFSANISGTLQDQHAQITKLSGVHTLLRKLQFLFELPARLNKCLELQA
YAQAVSSHRRARCVLQQYSHMPSFRGIQDDCSAIMEQLAQQLRQKFRDGGSNAKDLSECV
ELLLQLDEPAEELCDKFLSHAQSRLEADLQGLEAELREPVSPSEPTTDTAVKKAASTAAR
SPTNAATPTTNPFLSAGSKTDILEFIDRGCNEFVSNLCLVIASYQELFINRPQEGELASK
NIPEMASGKLHTFVDALAVRYFSLVERRIQEEKGVGDNSLLVRALDRFHRRLQAVTKLLP
GSSVPSQGTQIVVQAARERIKQYLSALQSFYLDSLTDVRQALAAPRLSVGGGTGSGVLLG
GGTSGKDAPPNLPELLASFSASILNQIKSVLASVHLFTAKDITFSNKPYFKGEFCSQGVR
ESLVVSFIKFVCQSSRQFCESTGDRGGSTPPALLLLLSRLCLDYETSTISYILTLTDEQF
LVQHHSPVTAVTALCAEANEAAQKLLNHYVKVQGLIISQMLRKSVETRDWVNTIEPRNVR
AVMKRVVEDTTSIDVQVGLLYEEGVRKAHSSDSSKRTFSVYSSSRQQVRYAPSYTPSAPM
DTNLLSNIHKLFSERIDIFSPVEFNKVSVLTGIIKISLKTFLECVRLRTFGRYGLQQIQV
DCHYLQMYLWRFVSDENLVHFLLDEIVGSAAHRCLDPSPMEQSVIEVICERG
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggattcagaccagggaactggtgccacaacaccggaatccgaccgtaagcgcaaagtg
cacggaatgctaaagctctactacgggctcaatgatgaaggaaaagccgtggagctagcc
gaatcgttggatccctgtgatataaacgggcctcatttcgatccagaggtctatctcaat
aagctaagaaaagagtgctctcttggcgatctcatggaccaggaaagctgtatggtaaag
cagatccgctccttggacagtgatatgcagacgctggtgtatgagaactacaacaagttc
atatcagctacagacacaatcaggaagatgaagaacgatttcaaaaagatggaagatgag
atggattgcctctctgccaatatggctgcaatcacagagttcagtgcaaatatcagtgga
acactacaggatcaacatgcacagatcaccaagctctctggtgtccacacactcctgcgt
aagctgcagttcctgttcgagctccctgcgcggttgaataagtgcctggagctgcaggcg
tatgcccaggccgtgagctcccaccgtcgtgcccgttgtgtgctccagcagtacagccac
atgccctctttccgtgggatccaggatgactgcagtgccatcatggagcagttggcacaa
caactacgccagaagttcagggatggtggctccaatgcgaaggacttgtcagagtgtgtt
gagctgctgctccagctcgatgagccagcagaggaactctgtgacaagttcctcagccat
gcccagtccagactggaggcagacctgcaaggcctagaagcagagttacgagaacccgtc
tcacccagtgaaccaacgacagatactgctgtaaagaaggctgcttcaactgctgctcgc
tctcccacgaatgccgccacgccaacaaccaacccatttctctctgcaggctccaaaaca
gacatcctggagttcattgacaggggatgtaatgagtttgtcagcaacctctgcctggta
attgcttcgtatcaggaactcttcatcaaccgtccacaggagggtgagctggcctcgaaa
aacatcccagagatggccagtggtaagctgcacaccttcgtggatgctctggctgtccga
tacttctccctggtggaacggaggatccaggaagagaaaggggttggggataactccctg
ttggtgcgtgcacttgaccgcttccatcggcgcctgcaggccgtgaccaaattgcttcca
gggtcgtccgtgccaagccaagggacccagatagtggtgcaagcggccagagaaaggatc
aagcagtacctgtcggccttgcagagcttctaccttgacagcctgactgacgtgaggcag
gccctggctgcaccccgcctctcagtgggtgggggcacagggagcggggtcctcctaggt
ggagggaccagtgggaaagacgcccctcctaacctccccgaactcctggcctcattttca
gcctccatcctgaatcagattaaatcagtgctggcctctgtgcatctctttacagcgaag
gacatcactttctccaacaagccttacttcaagggggaattctgtagccagggagtgcgt
gagagcctagtggtgagcttcattaagtttgtgtgccagtcgtctcgtcagttctgtgag
agcaccggggaccggggtggatccactcctcccgctctcctcctgctgctctctcgcctg
tgtctggactatgagacctccaccatctcttacatactcaccctcacagatgaacagttt
ctggtgcagcaccactctccagtaactgcggtcactgctctgtgtgctgaagccaacgag
gcagcacagaagcttctcaatcattatgtgaaggtccagggattaatcatctcacagatg
ctgaggaaaagtgtggaaaccagagactgggtgaacactattgagccacggaatgtacga
gcagtgatgaagagagttgtggaagacaccacgtccatagatgtccaggtgggccttttg
tatgaggaaggggtgagaaaagcccacagtagtgattccagtaagaggacattctctgtc
tacagcagttcacgacagcaagtccgctatgcacccagctacacaccaagtgctcctatg
gacacgaacctcctgagtaacatccacaagcttttctctgagaggatcgacatcttcagt
ccagtggagttcaataaggtctcagtcctgactgggattattaagattagtctgaagaca
ttcttggaatgtgttcgcctgcgtacttttggtcgctatggcctgcagcagatccaggtg
gactgccactatctgcagatgtacctgtggcgcttcgtgtcagatgagaacctggtgcac
ttcctgttggatgaaattgttggcagtgctgcccatcgctgtcttgacccctcgcctatg
gagcagagtgtcattgaggtcatctgtgagagaggctag
DBGET
integrated database retrieval system
