Clupea harengus (Atlantic herring): 105909192
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Entry
105909192 CDS
T09045
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
char03009
]
105909192 (nsun5)
Enzymes [BR:
char01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
105909192 (nsun5)
Ribosome biogenesis [BR:
char03009
]
Eukaryotic type
Other ribosome biogenesis factors
105909192 (nsun5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_N
Methyltr_RsmB-F
NSUN5_fdxn-like
FtsJ
RsmF-B_ferredox
HOOK_N_NuMA
Motif
Other DBs
NCBI-GeneID:
105909192
NCBI-ProteinID:
XP_012693258
Ensembl:
ENSCHAG00000012931
UniProt:
A0A6P3WAT7
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Position
8:complement(10002111..10005727)
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AA seq
488 aa
AA seq
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MALYNKAADILDKVEQKRGAVKTLVYDSKFQNIKQLFALVCETQKYSSVIQEIIDNTKLL
KGTKLRINLAKVLVYDLLFGQGLKCGGSWKAMIMKHRSRLQASLARMKVKQKVSCNEDLL
PANVRKPEGILLPRYVRVNTLKTNVEDVIDYLKREGFSYQGHANGIQDLSGLRGKAFVSD
SDLPNLLVFSTKKTFHDHYLYKNGHIILQDKASCLPAFLLNPPAGSHVIDACAAPGNKTS
HLAALMSNKGKLFAFDLDAKRLSTMSTLLLRAGLTCHQLANQDFLKVDPHNAEYKEVKHI
LLDPSCSGSGMVCLRDGSSELAEEQAQAQEASRLQSLSAFQLRCLTHALQFPQVQRVVYS
TCSIHTEENEQVVAACLQQNPNFRLVHLLPDWPERGLSPHTECLRASPTKTLTHGFFVAM
FERQANGSQAVNQQILPSPVVVSPDDDALEAEDIQEDPCSPEEEKQNSSAKKRKRNRNRS
RKKQRKTE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgtacaacaaagcagccgatattcttgataaagttgaacagaaacgaggagct
gtgaagactttggtgtacgacagtaagtttcagaacatcaaacagctctttgctctggta
tgcgagacacagaagtattcatcagtaatacaggagattatcgacaatacgaagctgctc
aaaggaaccaagctccgaatcaatctcgcaaaggttcttgtgtacgacctgctctttggc
caagggctcaaatgtgggggaagctggaaggcgatgatcatgaagcatcgatcacgtctc
caagcctctctggctaggatgaaggtgaaacaaaaagtcagctgcaatgaggacctgcta
cccgccaatgtaaggaagccagagggaattctacttccacgttatgtgcgagtgaacacc
ctgaagacaaatgtggaggatgtcattgactatctgaaaagagagggcttctcctaccag
ggacacgcaaatgggattcaggatttgtctgggctccgtggcaaagcattcgtcagtgat
tctgacctaccaaacctactggttttctctacaaaaaaaaccttccatgatcattatctg
tacaaaaatgggcatattattcttcaagacaaggctagctgtctgccagcgtttcttctg
aatccccctgctggtagccatgtcatagatgcctgtgcagcaccaggaaacaaaaccagc
caccttgctgctctcatgagcaataaagggaagttatttgccttcgacctcgatgccaag
cgcttgtccaccatgagcaccctactactcagagctggactcacttgtcatcagttggcc
aatcaagactttctaaaagtggacccacataatgcagaatacaaagaagtgaaacacatt
ctgctggatccttcatgcagtggatcaggaatggtgtgtctgcgtgatgggagttcagag
ctggcagaggagcaggcgcaggcgcaggaggcaagtcgtctgcagtctctgtctgcattc
cagctgcgctgcctgacccacgcccttcagttcccacaggtgcagcgtgtggtttactcc
acctgctccatacacactgaagagaacgagcaggtggtcgctgcctgccttcaacaaaac
cctaatttcaggttggttcatctgcttccagactggcccgagcgaggactgtccccgcac
acagaatgtttgcgtgccagtcctaccaagactctcactcatggcttctttgtggccatg
tttgaacgacaagccaacggaagtcaagccgtcaaccagcaaattctcccttccccagta
gtggtttcccccgatgatgatgcgcttgaggcagaggacattcaggaggacccctgctcc
ccagaggaagagaagcagaactcttcagctaaaaagcgcaagaggaacaggaacagaagc
aggaagaagcaaagaaagacagagtaa
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