Clupea harengus (Atlantic herring): 105909260
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Entry
105909260 CDS
T09045
Name
(RefSeq) LOW QUALITY PROTEIN: neurobeachin-like
KO
K24183
neurobeachin
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105909260
Membrane trafficking [BR:
char04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
105909260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Laminin_G_3
Neurobeachin
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
105909260
NCBI-ProteinID:
XP_031428916
Ensembl:
ENSCHAG00000009969
UniProt:
A0A6P8FZN9
LinkDB
All DBs
Position
9:complement(2663192..2942674)
Genome browser
AA seq
2939 aa
AA seq
DB search
MSSVKPVSMPGSMSLSDREPPPGHGHQEATCSVTGERMVTGSGSMVLPAGMINPSVPIRN
IKMKFAVLIGLIQVGEVSNRDIVETVLNLLVGGEFDLETNFIIQDAESIGCMVELLEHCQ
VTCQAEIWSMFTAILRKSVRNLQTSTDVGLIQQVLLKMSAVDDMIADLLVDMLGVLASYS
ITVKELKLLFSMLRGEGGLWPQHAIKLLSVLNQMPQRHGPDTFFNFPGRSAAAIALPPIA
KWPYQNGFTLNTWFRMDPLNNINVDKDKPYLYCFRTSKGIGYSAHFVGNCLIVTSLKSKG
KGFQHCVKYDFQPRKWYMVSIVHIYNRWRNSEIRCYVNGQLVSYGDMAWHVNTNDSYDKC
FLGSSETADANRVFCGQLGAIYVFSEALNPSQIFAIHQLSAGYKSTFKFKSESDIHLAEH
HKQVLYDGKLASSISFTYNAKATDAQLCLESSPRENSSIFVHSPHALMLQDVKAIVTHSI
HSAIHSIGGIQVLFPLFSQLDYHQQNESQVDSTVCATLLAFLVELLKSSVAMQEQMLGGK
GFLVIGYLLEKSSRVHITRAVLEQFLSFAKYLDGLAHGAPLLKQLCDHILFNSAIWIHTP
AKVQLSLYTYLSSEFIGTATIYSTIRRVGTVLQLMHTLKFYYWASNPTHSSGITPKGLDG
PRPSQKEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTMNEDENIHDVLQLLVAL
MSEHPASMIPAFDQRNGIRVIYKLLASKSEGIRVQALKVLGYFLKHLGHKRKVEIMHTHS
LFTLLGERLMLHTNTITVTIYNTLYEILTEQVCTQVVHKPHPDPDSTVKIQNPMILKVVA
TLLKNSSPSAELMEARRLFLSDMIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPKTLEE
QKIMEMVYNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHKEYLAKMYEEYQRQE
EENIKKGRKGFVSTISGLSAQPTSIKGATGASLELDDTSQTQTPESEADYPEGAEASRNP
LADGKGPVLATGGKGEGGEGGEEEEEEEEEGGEEGNAGGAAGREEAGGVRVEVHDLLVDI
KAEKVEATEVKLEDMDLSPESTPAVTAGVDALLGNAYSAAVEKLGGVGGVLVPELGGARR
AVVGLEEKSASGPLITLADDDKDGPKSTTAAVAPAGSGFLFGEVGASGADAKLLPELGSR
EPRVWTGASDDRGLLAHMTGGGSELGTGRCALEEEGEETTFKLAPSLTDTRLVADAGQLC
CEGCCGAGRGRCGDGGDVAAKGAGSSAAADAGSTASDTERSDDGKDKEAKKIQTTTTTQT
LHGRSGAQLERDLRVDLGFRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSPMHQRLLTDLL
FALETDVHVWRSHSTKSVMDFVNSNENIIFVHNTIHLISQMVDNIIIACGGILPLLSAAT
SPSSTKTELEIMETTQGMSAETANTFLSRLMAMVDVLVFASSLNFSEIEAEKNMSSGGLM
RQCLRLVCCVAVRNCLECRQRQRERGSKAFIPHNKSQESLQSVACANKDPERLLQDVDIN
RLRAVVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDILEPQRETARAMSQSGRSIRQEI
NSPTSTDNPVAFQDSGSVLKETPTPMEELHLEASLPHTDSGIGEEQVSGVLNGAEMDGLS
LGPGRIPTPPGAMSELLCTFSSEVKRSQESLLSEPSGGVEVLKTASSISSISQTNKGINV
REILKSLVASPMEGAEAGPETLPYPDPAVNREAHAMLPMQFHSFDRSVVVPVKKPPPGSL
AVNTVGSGSREGLAAGSTPNIFAAASATPKSMINTTGPPADAASTTSSSSSSFVNGATSK
NLPAVQPVAPMPEDTMENMSITTKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQELL
IEGLVCMKSSTSVVELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVAN
EAEFILNRQRAEDVHKHADFESNCAQYAADRKDEEKMCDHLIGAAKHRDHVTANQLKQKI
LNILTNKHGAWGALAQSQLHDFWRLDYWEDDLRRRRRFVRNPFGSTHLDITCKSLEDYGS
EEDEAVKSKKGFRSQAAVSQNAETELMLDGDEDNVSLLQEKEIDNLAGPVVLSTPAQLVA
PVIVARGTLSITTTEIYFEVDEDDPTFKRIDSKVLAYSEGLHGKWMFSEIRAVFSRRYLL
QNTAMEVFMANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLGTPRQLFKS
SNMTQRWQRREISNFEYLMFLNTVAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRD
LSKPVGALNPKRAVFYAERYETWEDEQMPPCHYNSHHSTATSTLYWLIRIEPFTTFFLNA
NGNKFDHPDRTFSSIARSWRNCQRDTSDVKELIPEFYYLPEMFVNSNGYHLGERQDGAAV
CDVELPPWAKKPEDFVRISRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLT
YEGSVNLDSIADPLLREAMEAQIQAFGQTPSQLLIEPHPPRSSAMHLSPLMFKDQMQQDV
IMVLKFPSNSPVTHVAANTLPHLAIPAAVTVTCSRLFAVNRWHNTVGLRGAPGYSLEQAH
HLPIEMDSLIANNSGVNKRQITDLVDQSIQINSHCFVVTADNRYILVCGFWDKSFRVYSS
ETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGDNPNNS
DYPAPRAVLTGHDHEVVCVSVCAELGLVISGAREGPCLVHTITGDLLRALEGTDLCALPR
LISVSSEGHCIIYYDRGRFCNFSINGKLLAQMELTDSTRAILLSSDGQNLVTGGDSGVVE
VWQACDFKQLYIYPGCDAGVRAMDLSHDQRTLITGMASGSIVAFNIDFNRWHYEHQNRY
NT seq
8820 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgtgaaaccggtatcaatgccgggttcgatgtctctctcggaccgggaacca
cccccgggtcacgggcatcaagaagctacctgctccgttaccggtgaaaggatggtgacg
ggctctggctcaatggttctgccggctggaatgatcaacccgtcggttccgatccggaat
atcaagatgaaattcgccgtcctcatcggtctgatccaggtcggtgaggttagcaacaga
gacattgtggagacggttctgaatctgctggtgggtggtgagtttgacctggagaccaac
ttcatcatccaggacgcggagagcatcggctgcatggtggagctgctggagcactgtcag
gtgacgtgccaggccgagatctggagcatgttcaccgccatcctgcgcaagagcgtgcgc
aacctgcagaccagcacggacgtgggcctcatccagcaggtgctgctcaagatgagcgcc
gtcgacgacatgatcgcagatctgctggtggacatgctgggagtactggccagctacagc
atcacagtgaaggagctgaagcttcttttcagcatgttacgaggagaggggggcctctgg
ccccagcatgccatcaagcttctgtcagtgctcaatcagatgccccagaggcacggtcca
gacaccttctttaacttcccagggcgcagcgctgcagcaatcgctttacctcctattgct
aagtggccttatcagaatgggttcactctcaacacctggtttcgcatggaccccctgaac
aacatcaacgttgataaagacaaaccttatctttactgcttccgcaccagcaaaggcatc
ggctactcagcgcactttgtgggcaactgcctgatcgtcacgtccctcaagtccaaaggc
aaggggttccagcactgcgtgaagtacgactttcagccccgcaagtggtacatggtcagc
atcgtccacatctacaatcgctggcgcaacagtgagatccgctgctacgtcaacggacag
ctcgtctcctacggcgacatggcctggcacgtcaacaccaatgacagctacgacaagtgc
ttccttggctcgtcagaaacagcggacgctaaccgtgtgttctgtgggcagcttggagcc
atctatgtgttcagtgaagctcttaacccatctcagatctttgccattcatcagctaagc
gctggatataagagcacctttaagtttaagtcggagagtgacatccacctggcggagcac
cacaagcaggtgctgtacgacgggaagctggccagcagcatttccttcacctacaacgcc
aaggccaccgacgcccagctctgtctggagtcctcgccccgggagaactcctccatcttc
gtgcactcgccccacgccctcatgctgcaggatgtgaaggccatcgtgacccactccatc
cacagtgccatccactccatcgggggcatccaggtgctcttccctctcttctcccagctg
gactaccaccagcagaacgaaagccaagtggactccaccgtctgtgccactctgctggcg
ttcctggtggagctgctgaagagctcggtggccatgcaggagcagatgctgggagggaag
ggcttcctggtgattggctacctgctggagaagtcgtcacgagtgcacatcaccagagcg
gtgctggagcagttcctgtccttcgccaagtacttggacggcctggcccacggggcgccc
ctgctcaagcagctgtgtgaccacatcctcttcaactcggccatctggatacacacgccg
gccaaggtgcagctgtctctctacacgtacctgtcctcggagttcatcggcacggcaacc
atctacagcaccatccggcgtgtgggcacagtgcttcagctcatgcacacgctcaagttc
tactactgggccagcaaccccacacactccagtggcataacacctaaaggactggatgga
ccacgtccctcgcagaaggagatcatatctctgcgtgcgtttatgctgctgttcctcaag
cagctcatcctgaaggaccgtggggtgaaggaagatgaactgcagagcatcctgaactac
ctgctcaccatgaatgaggacgagaacatccacgatgtgctgcagctcctcgtggctctc
atgtctgaacacccagcctctatgatccccgcctttgaccagaggaacggcatacgggtc
atctacaaactgctggcctctaagagcgagggcatccgggttcaagccctgaaggtcctc
ggctacttcctgaaacacctgggccacaagagaaaggtggagatcatgcacacacacagt
ctcttcacattgcttggggagaggctcatgctgcacaccaacaccatcaccgtgacgatc
tacaacaccctctatgagatcctaacggaacaggtgtgcacacaggttgtgcacaaacca
caccctgacccagactctacagtgaagatccagaacccaatgatcctgaaggttgtggcc
acgctgttgaagaactccagccccagtgctgagctgatggaggccaggcgcctcttcctc
tcagacatgatcaagctcttcagcaacagccgagagaacagacggtgtctgctgcagtgc
tctgtgtggcaggactggatgttctccctcggctacatcaaccccaagaccttggaggaa
cagaagatcatggagatggtgtacaacatcttccgcatcctcctctaccacgccatcaag
tatgagtggggcggctggcgcgtgtgggtggacaccctctccatcgcacactccaaggtg
acctatgaggcccacaaggagtacctggccaagatgtacgaggagtaccagcggcaggag
gaggagaacatcaagaagggccgcaaggggtttgtgagcaccatctcgggtctgtccgcc
cagccgacctccatcaagggggccactggcgcctctctggagctggatgacacctcgcag
acccagacccctgagagcgaggccgactacccggagggggccgaggcgtccaggaacccc
ctggccgacgggaagggccccgttttggcgacaggagggaaaggtgaaggaggagaaggg
ggagaggaggaagaggaggaggaggaggaagggggggaagagggtaatgcaggtggagca
gccgggagggaggaggcagggggggtgcgcgtggaggtgcacgacctgctggtggacatc
aaggcggagaaggtggaggccacggaggtgaagctggaggacatggacctgtcccccgag
agcacgccggccgtcaccgccggtgtggacgcgctgctcggcaacgcctactcggccgcg
gtggagaagctcgggggtgtcggcggggtgcttgtgcctgagttgggcggtgccagacgg
gcggtggtgggcctcgaggagaagagcgccagcgggcctctgatcaccctcgcggatgac
gacaaagacggacctaaaagcacgactgccgccgtcgcgcccgctggcagtggcttcctg
ttcggggaggttggcgcgtcaggcgcagacgccaagctgctgcccgagctgggttcacgg
gaaccacgggtgtggacgggcgccagcgatgaccggggcctgttggcacacatgacgggc
ggtggctcggagctgggcactggccgctgtgccctggaagaagagggggaggagaccacg
ttcaagctggcgccttcgctgacggacacgaggctagttgctgatgcaggccagctatgc
tgcgaggggtgctgcggggctggccgaggtcgctgcggagatggaggtgatgtggccgcc
aagggagctgggagctcggcggctgccgatgcggggagcacggcctcggacacagagagg
tctgatgacggcaaggacaaggaggccaagaagatccagaccaccaccaccacgcagact
ctgcacggccgctctggggcccagctggagcgggacctgcgcgtggacctgggtttccgg
ggcatgcccatgacggaggagcagcggcgccagttcagccccgggccccgcaccaccatg
ttccgcatcccagagttcaagtggtcacccatgcaccagcgtctcctcaccgacctgctc
ttcgctctcgagactgacgtgcacgtttggaggagccactccaccaaatcggtcatggac
tttgtgaacagcaatgagaacatcatcttcgtgcacaacaccatccacctgatctctcag
atggtggacaacatcatcatcgcgtgtggggggattctgcctctgctctcggccgccacc
tcgccctccagcaccaagacggagctggagatcatggagaccacgcagggcatgtccgcc
gagacggccaacacctttctgagccgcctcatggccatggtggacgtgctggtgttcgcc
agctctctcaacttcagcgagatcgaggcagagaagaacatgtcctcgggaggcctcatg
cggcagtgtctcaggctggtgtgttgtgtggcggtgaggaactgtttggaatgcagacag
agacagagggagaggggcagcaaggctttcataccgcacaacaagtctcaagagagcctg
cagagtgtagcctgtgccaacaaggatcctgagcgcctcctgcaggacgtggacatcaac
cgcctgcgtgccgtcgtcttccgtgacgtggatgacagtaagcaggcccagttcctggcc
ctggctgtggtctacttcatctctgtcctcatggtctccaagtaccgggacatcctggag
cctcagagggagactgccagggctatgagccaatcagggaggagcatacgacaggagata
aactctcccaccagtacagacaaccctgtggccttccaagactctggcagtgtactgaag
gagacacccacccccatggaggagctccacctggaagcctccctcccgcacaccgactcc
ggcatcggggaggagcaggtctccggcgtcctgaacggggccgaaatggacgggctgtcc
ttgggccccggccgcatcccgactcccccgggcgccatgagcgagctcctgtgcaccttc
tcctctgaggtcaagaggtcacaggagagcctgctgtcggagccctctggcggggtggag
gtgctcaagacggcctcgtccatctccagcatcagccagaccaacaagggcatcaacgtc
agggagatcctcaagagcctggtggcctcacccatggagggagcggaggctggccctgag
accctgccctacccggaccccgccgttaacagggaggcccatgccatgctgcccatgcag
ttccactctttcgacaggagcgtggtggtgccggtgaagaagcctcctccaggcagtctg
gccgtgaacaccgtgggctccggctccagggagggcctggctgcgggaagcacgcccaac
atctttgctgccgcctccgccaccccaaagagcatgatcaacactacaggtccgccggca
gatgcagcctccaccacgtcctcctcctcctccagctttgtgaatggagccaccagtaag
aacctgccggccgtgcagcctgtagcccccatgcctgaggacaccatggagaacatgagc
atcaccactaagctggagcgtgctcttgagaaggtggctcccctgctgagggagatcttt
gtggacttcgcccccttcctctcgcgcaccctgctcggcagccacggccaggagctgctc
atagaaggtctggtgtgtatgaagtccagtacctcagtggtggagctggtcatgctactc
tgctctcaggaatggcagaactccatccaaaagaatgcagggttggccttcatcgagctc
atcaacgaggggagactgctgtgccatgccatgaaggaccacatcgtacgcgtggccaat
gaagccgagttcatcctcaacagacagagggccgaggacgtccacaagcacgctgacttc
gagtcaaactgtgcccagtatgctgctgacaggaaggatgaagagaagatgtgtgaccac
ctgattggtgccgccaagcaccgtgaccacgtcacagccaatcagctcaagcagaagatc
ctcaacatcctgaccaacaagcacggggcctggggtgccctggcccagagtcagctgcat
gacttctggcgtctggattactgggaggacgacctgcgtaggaggcggagatttgtgcgc
aacccctttggctccacccacctggacatcacttgcaaatcgctggaggactacggttcg
gaggaggatgaggcggtgaagtccaagaagggctttcgcagccaggctgctgtgagccag
aacgccgagactgagctcatgctggatggagacgaagacaacgtcagcctcctgcaagag
aaggagatcgacaacctggcaggccccgtggtcctcagcaccccggctcaactcgttgcc
ccggtgatagtggctcgagggacgctgtccatcaccactacagagatctattttgaagtc
gacgaggatgaccccaccttcaaacggatcgactcaaaagtgctggcctactcagagggg
ctgcacggcaaatggatgttcagcgagatccgcgccgtgttctccaggcgctacctgctc
cagaacaccgccatggaggttttcatggctaacagaacatcagtcatgttcaacttccct
gaccaggccaccgtgaagaaggtggtgtacagtttaccccgtgtcggtgtgggcaccagc
tacggcctgccacaagcaaggcggatctcattaggcactccgaggcagctcttcaagtcg
tctaatatgacccagcgctggcaacgcagggagatctccaactttgagtacctgatgttc
ctcaacaccgtcgctgggaggacttacaatgacttgaaccagtaccctgtcttcccctgg
gtcctcactaactatgagtctgaagaactggacctcactcttcctggaaacttcagggat
ctgtcaaagccagtgggagctctgaaccccaagcgggcggtgttctatgcggagcgctac
gagacgtgggaggacgagcagatgcccccgtgccactacaactcacatcactccactgcc
acgtctactctctactggctcattaggatagagccattcaccacgttcttcctcaatgcc
aacggcaacaagtttgaccacccagaccgcaccttctcctcaatcgcccgctcatggagg
aactgccaacgcgacacatctgacgttaaggagctgatcccagagttctactacctcccg
gagatgtttgtgaacagtaacggctaccacctgggcgagcggcaggacggggcggcagtg
tgtgacgtggagctgcccccctgggccaagaagcctgaggactttgtgcgaatcagcagg
atggcgctggagagcgagtttgtgtcgtgtcagctgcaccagtggattgaccttattttc
ggctacaagcagcgcggcccagaggcggtgcgcgccctcaacgtctttcactacctgacc
tacgagggctccgtcaacctggacagcatcgctgaccccctgctccgagaggcgatggaa
gcccagatccaggcttttggacagacgccatctcagttgcttattgagcctcatcctcct
cgcagctccgccatgcacctgagtccgctgatgtttaaggaccagatgcagcaggacgtc
atcatggtgctcaagttcccctccaactcgcccgtcacgcacgtggccgccaacacgctg
ccgcacctcgccatccccgccgccgtcaccgtcacctgcagccgcctgttcgccgtcaac
cgctggcacaacaccgtgggtcttcgaggagcacctggctactcccttgagcaagcccat
catcttcccatagagatggactctctgattgccaacaactccggagtgaacaaaaggcag
atcactgacctggtggaccagagcattcagatcaactcccactgttttgtggtgaccgcc
gataaccgctacatcctggtgtgtggattctgggacaagagcttccgggtctactcctct
gagacaggcaaactcacccagattgtgtttggccactgggacgtggtgacgtgtctggcc
cgctccgagtcctacatcgggggcgactgctacatcgtgtcgggctccagagacgccacg
ctgctgctgtggtactggagcggccgccaccacatcatcggagacaaccccaacaacagt
gactacccggctcctcgtgcagtgctgacgggtcacgaccacgaggtggtgtgtgtgtct
gtgtgtgccgaactgggcctcgtcatcagtggagccagggagggtccgtgtctggtgcac
accatcaccggggacctgctgcgggccctggaaggcaccgatctgtgcgccctgccgcgc
ctcatctccgtctccagcgagggccactgcatcatctactacgacaggggccgcttctgc
aacttcagcatcaatggcaagctgctggcccagatggagctgaccgactccacacgggcc
atcctcctgagcagtgacggacagaacctggtgacgggcggggacagcggcgtggtggag
gtgtggcaggcctgcgacttcaaacagctctacatctaccccggctgcgacgccggtgtc
cgcgccatggacctgtcgcacgaccagaggactctaatcactggcatggcatctggtagt
attgtggcgttcaacatcgacttcaaccgctggcactacgagcaccagaaccgctactga
DBGET
integrated database retrieval system
