Clupea harengus (Atlantic herring): 105909310
Help
Entry
105909310 CDS
T09045
Symbol
rhbdd1
Name
(RefSeq) rhomboid-related protein 4
KO
K09651
rhomboid-related protein 4 [EC:
3.4.21.105
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105909310 (rhbdd1)
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
105909310 (rhbdd1)
Peptidases and inhibitors [BR:
char01002
]
Serine peptidases
Family S54: Rhomboid family
105909310 (rhbdd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
UIM_2
UIM
DUF3176
Motif
Other DBs
NCBI-GeneID:
105909310
NCBI-ProteinID:
XP_012693384
Ensembl:
ENSCHAG00000024273
UniProt:
A0A6P3W9Z0
LinkDB
All DBs
Position
9:4370244..4380023
Genome browser
AA seq
351 aa
AA seq
DB search
MMRGRQRGSNLGLVLLASQIFQVGVDNIPPVTLAALGLNVYLFFSPAAPLMSACVSVQEA
YWHGDWRRLLLSPFHHLDDWHLYFNMSSLIWKGMQLERRLGGPWFAYLLSVFSLLTGLVY
LLLEAGLAELTDDWSYGRQCAVGFSGVLFGLKVVNNHYNPGGITQVMGVPVANRYSCWVE
LVLIHIMSPGTSFVGHLAGILVGLLYTMGPLKKAMKTCAALVPAGGVPHQAHYNSSGASG
RRNPNTYPAYDTTYPPRASSYRDPYPPQTHSYPNTHTPNTHRYTDAQAPSAPPHEHHPYS
AGLSEEEQYQAAIRASLNERGGPPQSRPHYGIPPDPTSEEVRRRRLQRFAN
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggggccggcagcgcggctccaacctgggcctggtgctgctggcgtcccagatc
ttccaagtgggcgtggacaacatccctcccgtcaccctggccgcgctgggcctgaacgtc
tacctcttcttttcccccgccgcgccgctgatgagcgcgtgcgtgagcgtgcaggaggcc
tactggcacggggactggcgaaggctgctcctgtcgcccttccaccatctggacgactgg
cacctttatttcaacatgtcctcgctcatctggaagggcatgcagctggagcgcaggctg
ggcgggccttggtttgcctacctgttgtccgtcttctccctgctcactggattggtctat
cttctcctggaggcggggctagcagagctgacggatgactggtcctacggcaggcagtgt
gcagttgggttctcaggtgtgttgtttgggctgaaggtggtgaataaccactacaaccct
ggagggatcacgcaggtcatgggtgtccctgtggctaaccgctattcctgctgggtagag
ctggtcctcatacatatcatgtcacctgggacctcttttgtgggacacctggccggtatt
ctggtagggctgctgtataccatgggcccactcaagaaggccatgaaaacatgtgcagcg
ttagtgccagcaggtggagtcccccatcaggcacactataactcctcaggagcgagtgga
aggcgaaacccaaacacctatcctgcatatgacaccacgtaccccccgcgagcatctagt
taccgggacccctatcccccccagactcattcataccctaacacacacaccccaaacaca
cacaggtacactgacgcgcaggcccccagtgcacctcctcatgagcatcacccctactca
gcaggcctgtctgaggaggagcagtaccaggcagccatcagagccagcctcaacgaaaga
ggagggccccctcagtccagaccccactatggcatcccccctgaccccacatcagaggag
gttcgcaggcgtcgtctccagcgctttgctaactga
DBGET
integrated database retrieval system
