Clupea harengus (Atlantic herring): 105909393
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Entry
105909393 CDS
T09045
Symbol
otx2a
Name
(RefSeq) homeobox protein OTX1 A
KO
K09326
homeobox protein OTX1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105909393 (otx2a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
105909393 (otx2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
TF_Otx
CPSF73-100_C
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
105909393
NCBI-ProteinID:
XP_012693472
Ensembl:
ENSCHAG00000013814
UniProt:
A0A6P3WA24
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Position
24
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AA seq
359 aa
AA seq
DB search
MMSYLKQGPYGMNGLGLGGTMDLLHPSVYPAHPRKQRRERTTFTRTQLDILESLFGKTRY
PDIFMREEVALKINLPESRVQVWFKNRRAKCRQQAQAGNNSKVRPAKKKPSPSRESPGSE
SSGQFTPPAVSSNGSSSSSSSSSGSTGAHPSGLGSATSGATPVSAIWSPAPISPLPAPPS
VPDSAPPTSASCMQRPGSGSNGTPAYPVSYSQTPAYSQGYSAAAAAASGSYFGGMDPGSY
LAPMHSHHHPHAAHHPHTAHPQLGSMSSSSMSSHHPHHHIGQSSGHHHPHHPHHAHHHQG
YGSSGLGFGSTDCLDYKEQTTTAAAAAAAAAASSWKLNFSSAADCLDYKDQASWRFQVL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaagcaaggcccatacggcatgaatggcctggggctcgggggcact
atggacctgctacatccgtctgtctacccggcccatccgcggaagcagcgacgggagaga
actacttttacgcgcacgcaattggacattttggagtctctctttggcaaaacacgctac
ccggacatcttcatgagggaggaggtggcgctgaaaattaatttaccggagtcacgagtg
caggtgtggttcaagaaccgacgagccaagtgtcgccagcaagcgcaggcgggaaacaac
tccaaggtccgaccggccaagaagaagccctccccatccagggagagtccaggctcggag
agcagcggccagttcaccccgccggctgtctccagcaacggctcctcttcctcctcctcc
tcttcctccggctcgaccggggctcacccatctggcctgggctcggcgacctcaggcgcc
accccggtgtcggccatctggagcccggcgcccatctctcctctcccggcacccccctcc
gtcccggactcggcgccccccaccagcgcgtcctgcatgcagaggcctgggtctggttcc
aacgggacccccgcctacccggtgtcctacagccagacccccgcgtacagccaggggtac
tctgcagcagccgccgctgcctcagggtcctacttcgggggcatggaccccggatcgtac
ttggcccccatgcattctcaccaccacccacatgctgcccaccacccccacaccgcacac
ccccagctgggctccatgtcaagctccagcatgtctagccaccacccacaccaccacata
gggcagagctcgggccaccatcaccctcatcatccacaccatgcccaccaccaccagggc
tatggcagcagtggcttaggatttggctccacagactgtttggactacaaggagcagacg
acaacggccgctgccgctgctgccgcagccgccgcatcgtcatggaaactgaacttcagc
tcagccgcggactgcttggactacaaggaccaagcctcgtggagatttcaggttttgtga
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