Clupea harengus (Atlantic herring): 105909406
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Entry
105909406 CDS
T09045
Symbol
pax1a
Name
(RefSeq) paired box protein Pax-1a
KO
K09382
paired box protein 1/9
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105909406 (pax1a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
105909406 (pax1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_29
Motif
Other DBs
NCBI-GeneID:
105909406
NCBI-ProteinID:
XP_012693489
Ensembl:
ENSCHAG00000012504
UniProt:
A0A6P3WB35
LinkDB
All DBs
Position
14:complement(27480006..27483888)
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AA seq
345 aa
AA seq
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MEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKNIREYKQNDPGIFAWEIRDRLLADAVCDKYNVPSV
SSISRILRNKIGSLSQPNQYENCKQQPQQGIPYNHIYPYSYPNAMSPTGTKMGNPGVPVG
LSRAWPSAHTVSNILGIRAFMDPAALAAEGYPQKMEDWGSVNRGTFSTAHGVNGIDKSAV
DTDIKYPQTSSSLSSYVPACAYSPSNQYGVYSGPAGSYVTPAHHWQTQSTTLSHQNSGMT
MHAGDIHSQMAFKHAARDDRKPPSPLSKHEAMNSIHGLSLPTSSS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacgtatggggaggtgaaccaacttggcggggtgtttgtaaatggtcgtccg
ctgcccaatgctataaggctacggatagtggagttggcccagctcgggatacgaccctgt
gacattagtagacaactccgcgtctctcatggctgtgtgagcaagattctagcaaggtac
aacgaaaccgggtcaattttacccggtgctatcggtgggagcaagccacgggttaccacg
ccgaacgtggtgaaaaacataagggaatacaagcagaatgacccggggatctttgcttgg
gaaattcgagacagacttctagcggacgcagtttgtgacaaatacaacgtaccatcagtc
agctctattagtaggattttacggaacaagattggaagtctgtcccagccgaaccagtat
gagaactgcaagcaacagccacagcaaggaattccatacaaccatatctatccctattca
tatccaaacgcaatgtcacccactgggaccaaaatgggcaaccctggtgtgcctgtgggc
ctatcacgggcctggccctcagcgcacactgtcagcaatatccttggtattagagccttc
atggatcccgcagccctcgctgcagagggatatccacaaaaaatggaggactggggaagt
gtcaacagagggacgttttccaccgctcatggggtgaacggaatagacaaatcagctgtc
gacacagacataaaatatcctcagacttcatcctcattgtccagttacgtacctgcgtgt
gcatactctccctcaaaccagtacggtgtttatagtggtccagcgggcagctatgtcact
cccgcgcatcactggcaaacccagagcacgaccctgtcgcaccaaaacagtggtatgacg
atgcacgcgggtgacatccattcgcaaatggcattcaaacatgcagcgcgagatgaccgt
aaacctcccagtcccctgagcaagcacgaggcgatgaacagcatacacggactcagtctt
cctacctcatcatcataa
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