Clupea harengus (Atlantic herring): 105909410
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Entry
105909410 CDS
T09045
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00562
Inositol phosphate metabolism
char01100
Metabolic pathways
char04020
Calcium signaling pathway
char04070
Phosphatidylinositol signaling system
char04261
Adrenergic signaling in cardiomyocytes
char04270
Vascular smooth muscle contraction
char04310
Wnt signaling pathway
char04371
Apelin signaling pathway
char04540
Gap junction
char04621
NOD-like receptor signaling pathway
char04912
GnRH signaling pathway
char04916
Melanogenesis
Module
char_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
105909410
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105909410
04371 Apelin signaling pathway
105909410
04020 Calcium signaling pathway
105909410
04070 Phosphatidylinositol signaling system
105909410
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
105909410
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
105909410
09152 Endocrine system
04912 GnRH signaling pathway
105909410
04916 Melanogenesis
105909410
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
105909410
04270 Vascular smooth muscle contraction
105909410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105909410
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
105909410
Membrane trafficking [BR:
char04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
105909410
Endocytosis
Macropinocytosis
Phospholipase C
105909410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PH_14
PLC-beta_C
PI-PLC-Y
EF-hand_like
C2
Motif
Other DBs
NCBI-GeneID:
105909410
NCBI-ProteinID:
XP_031435586
Ensembl:
ENSCHAG00000004483
UniProt:
A0A6P8GEM5
LinkDB
All DBs
Position
14:complement(26829608..26873953)
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AA seq
1219 aa
AA seq
DB search
MAGAQPGVHALQLKRISVPENLKKGSRFMKWDDDSSAVTSVTLRVDPHGFFLYWTDQNKE
TDLLDITYIKDARTGKCTKTPKEAKLRELLDVGNLVGRIENRMLTVVTGPDLVNITYLNF
MAFQEEVAKEWADELFSLASNLLAQNMARESSLEKVFTRLKLLPNPEGRIPVKNICRMFS
SDRKRVETALESCNLPSGRNDSIPLEDLTPDVYKAFLSNICPRPEINQIFAEQGAKGRNY
LSMEQMTDFINNKQRDPRLNEILYPPLKPDQVQQLMERFEPSPGSLQKGQISMEGFSRYL
ISVENGFIPPEKLDQSEDMTFPLSHYFINSSHNTYLSAGQLAGNSSVEMYKQVLLSGCRC
VELDCWKGRTAEEEPVITHGFTMTSEISFKEVIEAIAECAFKTSPFPVILSFENHVDSPK
QQAKMAEYCKSIFGDGLLTECLEKYPLEHGVPLPSPLELMGKILIKNKKSHHKPSDGSAK
KKLSEQASNTNSDSSSVFEPSSPSAGPAVPTEVEVESEDEDDDDDDCKKSDEGTAGEEAI
ATEEMSNLVNYIQPGKFTSFEASKKNNRSYQMSSFVETKALELLTKSPVEFVEYNKLQLS
RIYPKGTRVDSSNYMPQVFWNAGCQLVALNFQTIDLSMQLNLGMYEYNGKSGYRLKPEFM
RRPDKHFDPFAESTVDGIVANTLSVKIISGQFLTDKKVGVYAEIDMFGLPVDTRRKAMKT
KTSQSNAVNPVWDEEPIVFKKVVLPTLASLRLAVFEEGGKFIGHRLIPVSAIRPGYRYIG
LRNEKNQNLILPTLFVYIEVKDYVPDTFADVIEALSNPIRYLNLMEQRSKQLAALTLEEG
EEDISKEPAEPGVEQPAGGEPKSELKPAPLENGLSHTPSASPKPASQAPPQQQPTGSTKP
AAAKTEDIIQSVLTEMEAQTLEELKQQKAFVREQRRHYKEMKELVKKHHKKTTDMIKEHT
AKYNEFQSEYLRKRAVLQKSAKRDGKKRCLSPGQEHGLSFFEQELVQLDQESKGKLAELK
EQQQQQLLNLRQEQYYSEKYLKKEHIKQVMVKLTTVAEESQSNQMKKLKEICEKEKKELK
KKMDRKRQEKINEAKSKEKHLTEEEKLEINRSYVNEVVQHIKRLEEAQTQRHEKLIETHK
SILQQIVDEKPKLQSDLDQEYQDKFRRLPVEIQEFVQETSKRKLTEDGDQEALPASSTQE
RLSHKGAQSEDDMEDEKKD
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggcacagcctggggttcacgctctgcagctcaaacggatctccgttccagag
aatctgaagaaaggcagcaggtttatgaaatgggatgatgattcatcagcggttacctcg
gtgacgttacgtgtggaccctcatggcttttttctgtactggaccgaccagaataaggaa
acggacctgttggacatcacctatatcaaagatgccagaaccggaaagtgtacaaagact
ccaaaggaggccaaactgcgagagctgctggacgtgggaaacctggtgggaaggattgag
aacagaatgctgacggtggtgacaggaccggacctggtgaacatcacctacctgaacttc
atggcctttcaggaggaggtggctaaggagtgggcagatgagttgtttagtctggcatcc
aacctgctggcacagaacatggcaagggagtccagcctggagaaagtattcacaagactg
aagctactgccaaacccggagggtcgtatcccagtgaagaacatatgccgcatgttctcg
tctgaccggaagcgtgttgagacggcgctggagagctgtaacctcccgtcgggacggaat
gactccatccccctggaggacctcacccccgacgtttacaaagcgttccttagcaacatc
tgtccgaggccggaaatcaatcagatctttgcagagcaaggggcaaaaggccgtaactac
ttgagcatggagcagatgacagactttatcaacaataaacagcgtgacccacgactcaat
gagattttgtacccaccactgaaaccagaccaagtccagcagctaatggagaggtttgag
cccagtccaggctctctccagaaagggcagatatcaatggaggggttctccagatacctc
atcagtgtggaaaatggtttcattcctcctgaaaaactggaccagagtgaggacatgacc
ttccctctgtcccactacttcatcaactcctcacacaacacctacctctcagcgggccag
ctggctgggaactcgtcagtggagatgtacaagcaggtgctgctgtcgggctgccgctgt
gtggagctggactgctggaagggccgcacggcagaggaggagcccgtcatcacccacggc
ttcaccatgacctctgaaatctccttcaaggaagtgatcgaggccattgccgagtgcgcc
ttcaaaacatccccgtttcctgtcatcctctcctttgagaaccatgtggactctccaaag
cagcaagccaagatggctgaatactgcaaatcaatctttggagatggcctgctgactgaa
tgtcttgagaaatacccactggagcatggggtgccgttgcccagtcctctggagctcatg
gggaagatcctcatcaagaacaagaagtcccaccacaagccgtcagatggcagcgccaag
aagaagctgtcagagcaggcgtccaacaccaacagtgactcctccagtgtgtttgagccc
tcgtctcccagtgctggtccagcagttccaacagaggtggaggttgagagtgaagatgaa
gatgatgacgatgacgactgtaagaagtcggatgagggaaccgctggcgaagaagccatt
gccacagaggaaatgtccaaccttgtcaactacatccagcccggaaaattcacctccttt
gaagcctctaaaaagaacaaccgcagttatcagatgtcatcctttgtggagaccaaagcc
ctggagctgctcactaaatcaccagtggagtttgtggaatacaacaagctccagctcagc
cgcatctatcccaaagggaccagggtggattcctccaactatatgcctcaagtcttctgg
aatgcaggatgtcagttagtggccctgaacttccaaacaatagatctctctatgcagctc
aacctgggaatgtatgagtacaatgggaagagtggctaccggcttaagcctgagttcatg
aggaggcctgacaagcattttgacccattcgctgagagtaccgtggatggcattgtagcc
aacactctgtcagtaaagatcatatctggtcagtttctgacagacaagaaagttggtgtg
tatgctgaaatcgatatgtttggacttccagtggacacaagaaggaaagccatgaaaacg
aagacatcacagagcaacgcagtcaatcctgtttgggatgaggagcccatcgtgttcaaa
aaggttgttcttcccactctggcttcactgagattagctgtctttgaggaaggagggaaa
ttcattgggcatcgtctcatcccagtgtcagccatacgaccaggatatcggtacattggg
ctcaggaatgagaaaaatcagaatctcatccttccgactctctttgtgtacatcgaagtt
aaagactatgtaccagatacatttgcagatgttatagaggcattgtccaaccccattaga
tatttgaacttaatggagcagagatcgaagcagctggctgcactgacattggaagaaggg
gaggaggacatcagcaaagagccggctgagcctggcgtggagcagccagcaggtggggag
cccaagagtgagctgaagcctgcccccctggagaacggactgagccacacgcccagcgcc
tcccccaaacctgcctcccaggccccgcctcagcagcagcccacaggatcaactaaacca
gcggcagctaaaactgaagacatcatccagagtgtcctgacagaaatggaggcccagacc
ttggaggagctcaagcagcagaaggcgtttgtccgtgagcagaggaggcactacaaggag
atgaaggagctggtgaagaagcaccacaagaagacaacagacatgattaaggagcacacg
gccaagtacaatgagtttcagagcgagtacctccgcaaacgggccgtgctacagaagtcg
gctaaaagagatggtaagaaaaggtgtctgtcccctggccaggagcatggcttgtccttc
ttcgagcaggagctggtccagttggaccaggagagcaagggcaagctggcggagcttaag
gagcagcagcagcagcaactgctcaacctgaggcaagagcagtactacagcgagaagtac
ctcaagaaggagcacatcaaacaggtcatggtgaagctgacgacagttgctgaagaatca
caaagcaaccagatgaagaaactgaaagagatatgtgaaaaagaaaagaaagaactgaaa
aagaagatggacaggaagaggcaggagaagatcaatgaagctaaatcaaaggagaaacac
ttaacagaggaagagaagctggagataaacaggtcatatgttaatgaagtagtacaacac
attaaaaggttggaggaggcccaaactcaaaggcacgagaaacttattgaaacccacaag
agcattctccagcaaatagttgatgaaaaacccaagctgcaaagcgatttggaccaggag
taccaggacaagttccgccgactcccggtggagattcaggagtttgtgcaggagaccagt
aagaggaaactgacggaggatggagaccaggaggcactgccagcctcctctacccaggag
aggctcagccacaagggggcacagtcggaggatgacatggaggatgagaagaaagactga
DBGET
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