Clupea harengus (Atlantic herring): 105909428
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Entry
105909428 CDS
T09045
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X3
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00562
Inositol phosphate metabolism
char01100
Metabolic pathways
char04020
Calcium signaling pathway
char04070
Phosphatidylinositol signaling system
char04081
Hormone signaling
char04082
Neuroactive ligand signaling
char04261
Adrenergic signaling in cardiomyocytes
char04270
Vascular smooth muscle contraction
char04310
Wnt signaling pathway
char04371
Apelin signaling pathway
char04540
Gap junction
char04621
NOD-like receptor signaling pathway
char04912
GnRH signaling pathway
char04916
Melanogenesis
Module
char_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
105909428
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105909428
04371 Apelin signaling pathway
105909428
04020 Calcium signaling pathway
105909428
04070 Phosphatidylinositol signaling system
105909428
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105909428
04081 Hormone signaling
105909428
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
105909428
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
105909428
09152 Endocrine system
04912 GnRH signaling pathway
105909428
04916 Melanogenesis
105909428
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
105909428
04270 Vascular smooth muscle contraction
105909428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105909428
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
105909428
Membrane trafficking [BR:
char04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
105909428
Endocytosis
Macropinocytosis
Phospholipase C
105909428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
PLC-beta_C
Motif
Other DBs
NCBI-GeneID:
105909428
NCBI-ProteinID:
XP_012693509
Ensembl:
ENSCHAG00000003347
UniProt:
A0A6P3WB39
LinkDB
All DBs
Position
14:complement(26799479..26829515)
Genome browser
AA seq
1198 aa
AA seq
DB search
MARAYEFNWQKPLPSFMQEGAYFDRFEEDPFVFEPQCFFKVDEFGFFLTWKSEGKEGQVL
ECSLINSIRSSIPKDPKTSASLEAMGRSESELEGCTLCICSGPDLINLTFTFMVAQSVNV
TKQWTEGLRSLIHNFRANNVCPMTCLRKHWMRLSFLTNVNGKIPVRSITRTFASGKTEKG
IFQALKDLGLPSGKNDEIDHLVFTFDKFYALTQKICPRIDIEELFKKINGGKSDYLNVDQ
LVCFLNENQRDPRLNEILFPIYDFKRALQIAEQYEPDEKLKRKGLMSSDGFCRYLMSDEN
APVYQDRLELYQDMDHPLAHYFISSSHNTYLTGRQFGGKSSVEIYRQVLLSGCRCVELDC
WDGKGEDQEPIITHGKAMCTDILFKDAIQAIKETAFVTSEYPVILSFENHCSKPQQYKLA
RYCEDIFGDLLLREALEGFPMEPGRPLPSPRDLRRKILIKNRRMKPEAEQKELEDFKRHM
EAGELSSFPSAEENEGEAFNEVDEAHPELQLGEAFCSSEPSGPEEEESGRKMTQDEVEIS
EAPYQENGKKVGEANMDVQELINSYHYVAATTNVHPYLSSIVNYAQAVKFLGFEVAEDNN
IHHNMSSFNETVGLGLLKTSAIEFVNYNKRQMSRLYPKGGRVDSSNYMPQIFWNAGCQMV
ALNFQTPDLSMQLNQGKFEYNGSCGYLLKPDFMQRPDRMFDPFSETPVDGVIAAMCSVQV
FSGQFLSDKKIGTYVEVDMYGLPTDTIRKEFRTKMVMNNGLNPLYNSEPFEFRKVILPDL
AVLRIAVYDDNNKLIGQRILPLDGLQAGYRHISLRNEGNKPLSLPTVFCNIVLKTYVPDG
FGAIVDALSDPKRFLSVTEKRVDQMKAMGIEECDIVDVLSDSSKSDKKRKVSQVKASVSP
CGSPELRHTSTAGQQPAGSSAATDTALLVHPVSVDDLKQTKTYLKLVKEQQRGLSALKKK
HAKEQLVMQRTHSTQVDRIVSQHNKEKGTLEKQLEKAVKKASEKNSSHLKMETDFKLQTV
SAEHKEKVNELVSQQCGEWSGLIGGHGAESQALRDQHVLQQCELLKALLASLQQQHRQQL
QLIHNQHGKEVRAKQAKSSMESGKAISQDKSIKNKAERERRVRELNSCNTKKFLEERKRL
YMKQSEETEQLQKAQREQQDKLEKCIEQLLRSHHSKYHSEGQQDAEREERGKTTGKPQ
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggcacgagcatatgagttcaactggcaaaagcctcttccaagcttcatgcaggagggg
gcatactttgaccgatttgaagaggacccttttgtttttgaacctcagtgctttttcaaa
gtggacgagtttggtttctttcttacatggaaaagcgagggaaaggaaggtcaggttttg
gaatgttctcttatcaacagcatacgcagcagcatcccaaaggatcccaaaacctcggcg
tcccttgaggcgatgggaaggagtgagagtgagttggagggctgcaccctgtgcatatgc
agtggccctgacctgatcaatctcaccttcacgttcatggtggcccagagtgtcaacgtt
accaagcagtggacagagggcttgaggtcactgattcacaacttcagggccaacaacgtg
tgccccatgacctgcctgaggaaacattggatgaggctgtcatttcttacaaatgtgaat
ggaaagattccagtgagaagtattacaagaacctttgcctcaggcaaaactgaaaaagga
atcttccaagcactgaaggacttaggtctacccagtggaaagaatgatgaaattgaccac
ttggtgtttacatttgacaagttttatgcactcacacaaaagatctgtcccagaattgac
attgaggaactcttcaagaagataaatggtggcaaaagtgattatttaaacgtagaccag
ttagtctgctttttaaatgaaaatcagcgagatccacggctcaatgagattctctttcct
atctacgacttcaagcgagccttacagatagcagagcagtatgagccagatgagaagctg
aaaagaaaaggcttgatgtcgagcgacggcttctgccgctacctgatgtcagatgagaac
gcccccgtctaccaggatcgcctggagctctaccaggacatggaccatcccctggcccac
tatttcatcagctcctcgcacaacacctacctgacaggccgccagttcggggggaagtcg
tctgtggagatttaccgtcaggtgctcctgtcaggctgcaggtgtgtggagctagactgc
tgggatggcaaaggtgaggaccaggagcccatcattactcatgggaaggccatgtgcaca
gatatcctcttcaaggatgctattcaggccatcaaggaaactgcctttgtgacatctgag
taccctgtgattctgtcctttgagaaccactgctccaagcctcagcagtacaagttggcc
cgatattgtgaagacatttttggggatttgttgctccgggaggcactagaaggctttcca
atggagcccgggcgccctctgccctctccccgtgacctcagaaggaaaatcctaattaag
aaccgaagaatgaaaccagaggctgagcagaaggagctggaggattttaagaggcacatg
gaagcaggtgaactgagcagctttcctagtgcggaggagaatgaaggagaagcgtttaac
gaggtggacgaggcgcacccggagctgcagctgggggaggcgttctgctccagtgagccg
agcgggccggaggaggaggagagcggcaggaaaatgacacaggatgaagttgagatatca
gaagccccctatcaagaaaatggcaagaaggttggggaggcaaacatggatgtccaggag
ctcatcaacagctaccactatgttgcagccacaaccaacgtccacccctacctctcatcg
atcgtcaattatgcccaggctgtgaagtttctgggctttgaagtagctgaggacaacaac
atccatcacaacatgtcctcattcaacgaaacggttggcctgggactgctgaagacgagt
gccattgagtttgtgaactacaacaagcggcagatgagtcgcctgtatcccaaagggggc
cgagtagactccagtaattacatgcctcagatcttctggaacgccggctgccagatggtg
gctctgaacttccagaccccagatctgtccatgcagctgaaccagggcaagtttgaatac
aacggctcatgcgggtacctgctgaagcccgacttcatgcagcggcccgatcggatgttc
gatcccttctccgagaccccagttgatggtgtgatagcggccatgtgcagtgttcaggtt
ttctccggtcagtttttgtccgacaagaagatcgggacgtacgtggaggtggacatgtac
gggctgcccacagacaccatcaggaaagaattcagaaccaagatggtgatgaataatggg
ctcaatccactttacaactctgaaccttttgagttcagaaaggttatcctaccagacctg
gctgttctgagaatagctgtgtatgatgacaacaataagctgattggccaaaggattctc
cccctggacgggttgcaggcagggtacagacacatctccctgaggaacgagggcaacaag
ccgctctcactgcccactgtcttctgcaacatcgtcctcaaaacatatgtgcccgatggc
tttggggccattgtggatgcgttgtctgacccaaagaggttcttatccgtcactgagaag
agggtggaccagatgaaggccatgggcatagaggagtgtgacatcgtggatgtgctgagc
gacagctccaagagcgataaaaagcggaaggtgagccaggtgaaggccagcgtcagcccg
tgtgggagccccgagctcaggcacacctccacggcaggacagcagcccgccggctcctca
gcagcaacggatacagccctgctggtgcatcccgtgagtgtggatgacttgaagcagacg
aagacctacctcaaactggtgaaggagcagcagcgggggcttagtgccttaaagaagaaa
catgcaaaggagcagctggtgatgcagaggactcacagcacacaagtggacagaattgta
agtcagcacaacaaggagaaggggactctggagaaacagctggaaaaagccgttaagaaa
gcgagtgaaaagaacagttcccatctgaagatggagacagacttcaaactccagaccgta
agcgcggagcacaaagaaaaggtgaacgagctggtgtcccagcagtgtggcgagtggtcg
gggctgatcggtggtcacggcgcggagagccaggcgctgcgggaccagcacgtgctgcag
cagtgtgagctcctgaaggctctgttagcgtccctccagcagcagcaccgccagcagctg
cagctcatccacaaccagcatggtaaagaggttcgagccaagcaggccaaatcctccatg
gagagcggcaaagctatcagtcaagataaaagtatcaaaaacaaagccgagagagaaagg
agggtgcgggagctgaacagctgcaacacaaaaaagttcctggaggagagaaaaaggctc
tacatgaagcagtcagaggagacggagcagctccagaaagcccagcgtgaacagcaggac
aagctggagaagtgcattgagcagcttttgcgctcacatcactcaaagtatcacagtgaa
gggcaacaagatgcagagagagaggaaagaggaaagacaacaggcaagccacagtga
DBGET
integrated database retrieval system
