Clupea harengus (Atlantic herring): 105909441
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Entry
105909441 CDS
T09045
Symbol
nkx2.2a
Name
(RefSeq) homeobox protein Nkx-2.2a
KO
K08029
homeobox protein Nkx-2.2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105909441 (nkx2.2a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
105909441 (nkx2.2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
105909441
NCBI-ProteinID:
XP_012693523
Ensembl:
ENSCHAG00000012578
UniProt:
A0A6P8GBP9
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Position
14:27517499..27525741
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AA seq
267 aa
AA seq
DB search
MSLTNTKTGFSVKDILDLPDTNDEEGSITGAEDDTEGSEPTKTTGVLVQSPLEGVPNLPL
KNPFYDNSDNPYTRWLATTDSIQYSLHGLSANSQDSSAKSPEPSADESPDNDKETSSNGS
DSGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKM
KRARAEKGMEVSHLPSPRRVAVPVLVRDGKPCHTLKAQDLAATFQAGIPFSAYSAQSLQH
LQYNAHYSATPQFPSAHHLVQTQQWTW
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgaccaacacaaagacgggcttttctgtaaaggacattttggacctccctgac
acgaacgatgaagaaggatctatcactggagcggaggacgacacagagggatctgaacct
acaaaaacgactggagttttggtgcaaagtccacttgaaggtgttccgaatctgccttta
aagaaccccttttatgacaatagtgacaatccttacacaagatggcttgccaccacagac
agcatccagtattcattgcacggtctatccgctaactcacaagactcatcagccaaatcg
ccagagccttccgcggatgaatcaccagacaacgacaaggaaacttcaagcaacggcagc
gactccggtaagaaacgcaagaggagagtgctgttctccaaggcgcagacttacgaactc
gaacgtcgctttaggcaacagagatacctttcggcacccgagagagaacatctcgctagc
ttgattcgcctgacaccaacgcaagtgaaaatatggttccagaaccaccgatacaaaatg
aagagggctcgcgctgagaaaggtatggaagtgtcccatctcccctcgccacgacgggtg
gccgtccctgtcttagtcagggatggtaagccctgccacacactaaaagctcaggacttg
gcggccacttttcaggctggaatacccttctccgcatatagcgcccagtccctccagcac
ttgcaatataacgcccattacagcgccacaccacagttcccttcggcacatcacttggta
caaacgcaacagtggacttggtga
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