KEGG   Clupea harengus (Atlantic herring): 105909465
Entry
105909465         CDS       T09045                                 
Name
(RefSeq) protein PALS1-like
  KO
K06091  MAGUK p55 subfamily member 5
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04519  Cadherin signaling
char04530  Tight junction
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    105909465
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    105909465
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:char04990]
    105909465
Domain-containing proteins not elsewhere classified [BR:char04990]
 PDZ domain-containing proteins
  MAGUK family proteins
   105909465
SSDB
Motif
Pfam: Guanylate_kin L27_N PDZ PDZ_6 SH3_2 PDZ_2 L27 SH3_1 CSN4_RPN5_eIF3a SH3_9 DUF3881
Other DBs
NCBI-GeneID: 105909465
NCBI-ProteinID: XP_012693554
Ensembl: ENSCHAG00000001239
UniProt: A0A6P3WAG1
LinkDB
Position
14
AA seq 690 aa
MMTTSHMNGHVTESGGGGGEGTGSGGGRHEGPEEPQQWHREMAVDCPGDLGSRTLPVRRS
AQLERIRQHQEDRRRREEEGRTRQELDLNASMRLKKLAQNAQNPKVGIDNPTFDPVEGPG
GPLSALQGLGGPPSLLELEELLLSLKQVQHCLGDEQSREDVEMVLQLVQKTDFQKAFSIH
NAVAQHMHRASPPFPLTERAQGLTHEVQSMLLSTQQKESLELNTLLSSPNFQALLLAHDG
IAEQEMQFEPESFQEQPCENLAQWGGETVKIVRIEKARDIPLGATVRNDMDSVIISRVVK
GGAAERSGLLQEGDEVLEINGVEIRGKDVNEVFDILAEMHGTLTFVLIPSPHNKPPPVKE
TVVHVKAHFDYDPSDDPYVPCRELGLCFQKGDILHIISQDDPNWWQAYRDGDEDNQPLAG
LVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKKLLYNANRNDDYDTEEVLT
YEEMALYHQPANRKRPIALIGPPNCCQNELRQRLLTSEPDRFGGAVPHTTRNRRDIEVNA
RDYHFVSRQAFEMDAAAGKYIESGEFEKNLYGTSTDSVRQIINTGKICILCLHTQSLKVL
RSSDLKPYIIFIAPPSQERLRALLTKDNKNPKPEELRDIIEKAREMEQNFGHLFDAAIVN
TDQDKAYQELLRLINKLDTEPQWVPSSWLR
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgatgacgacgtcccacatgaacggtcacgtgaccgagtcgggtggaggcgggggcgag
ggcaccgggtctggtggcgggcgtcacgagggccccgaggagccccagcagtggcaccgc
gagatggccgtggactgcccgggcgacctgggctcgcggacgctgcccgtcaggcgcagc
gcccagctggagcgcatccggcagcaccaggaggaccggcggcggcgcgaggaggagggc
cgcacccgccaggagctggacctcaacgcctccatgcgcctcaagaagctggcgcagaac
gcgcagaaccccaaagtgggcatcgacaaccctacgtttgacccggtggagggccccgga
gggccactgtcagccctgcagggactgggagggcccccttcactgctggagctggaggag
ctgctgctctccctgaagcaggtgcagcactgcctgggcgatgagcagagccgcgaggac
gtggagatggtgctgcagctggtgcagaagaccgacttccagaaggccttcagcatccac
aacgccgtggcccagcacatgcaccgcgccagcccacccttccccctcacggagcgggcg
caggggctcacacacgaggtccagtccatgttgctgtccacccaacagaaggagagcctg
gagctcaacaccctgctctcctcgcctaacttccaggctctgctgctggcccatgacggc
attgctgagcaggagatgcagtttgagcccgaaagcttccaggagcagccgtgtgagaac
ctggcccagtggggcggagagacggtgaagatcgtgcgcatagagaaggccagagacatc
cctctgggcgcgacggttcgtaacgacatggacagcgtgatcatcagccgtgtggtgaag
ggcggggcggccgagcggagcggcctgctgcaggagggagacgaggtcctggagatcaac
ggagtcgagatccgcggcaaagacgtcaacgaggtcttcgacatcctggcagagatgcac
ggcactctgacctttgtgctaatccccagtcctcacaacaaacctcctcctgtcaaagag
actgtggtgcatgtgaaggcccactttgactacgacccctctgacgacccctacgtgccc
tgccgggagctgggactgtgcttccagaagggggacatcctgcacatcatcagccaggac
gaccctaactggtggcaagcctacagggatggagacgaggacaatcagccgctagcaggc
ttggtgccagggaagagcttccagcagcaaagagaagccatgaaacaaaccatagaagag
gataaagaacctgagaagtcaggaaagctgtggtgtgcaaagaaaaacaagaaaaagagg
aagaagcttctctacaatgccaacagaaatgatgattatgacactgaggaagttctgacc
tatgaggagatggcgttgtaccaccagccagccaataggaagcggccgatcgctctgatt
gggccccccaactgctgtcagaatgaactgaggcaaagactgttgaccagtgagccagac
agatttggaggagcagtcccacacaccacgcgcaaccggagggacatagaggtgaacgcg
cgcgactaccacttcgtctcgcggcaggccttcgagatggacgcggccgccgggaagtac
attgagtccggcgagtttgagaagaatctgtacggcaccagcaccgactcagtccggcag
atcatcaacacgggaaagatctgcatcctctgcctgcacacccagtcactgaaggtttta
cggagctctgacctgaagccttacatcatattcatcgcacccccctcccaagagcggttg
cgtgctctcctgacaaaagacaacaagaacccaaagccggaggagctgagggacatcata
gagaaggcccgcgagatggagcagaacttcgggcacctgttcgacgccgccatcgtcaac
acggaccaggacaaggcctaccaggagctgctgcgcctcatcaacaagctggacacggag
ccgcagtgggtgccctcgtcctggctgcgctga

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