Clupea harengus (Atlantic herring): 105909627
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Entry
105909627 CDS
T09045
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin
KO
K08770
ubiquitin C
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03320
PPAR signaling pathway
char04120
Ubiquitin mediated proteolysis
char04137
Mitophagy - animal
char04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105909627
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105909627
04137 Mitophagy - animal
105909627
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
105909627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105909627
Ubiquitin system [BR:
char04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
105909627
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
DUF2604
Motif
Other DBs
NCBI-GeneID:
105909627
NCBI-ProteinID:
XP_012693720
UniProt:
A0A6P3WAI2
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Position
8:complement(24545151..24547577)
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AA seq
547 aa
AA seq
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MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQXLREDP
HGEDHHP
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctcacggggaagaccatcacccttgaggtggaggcaagc
gacaccattgagaacgtcaaggccaagatccaggacaaagaaggcattcccccagaccag
cagaggttgatcttcgctggcaagcagctggaagatggccgcaccctgtccgactacaac
atccagaaagagtccactctccacctggtcctgcgtctgaggggaggcatgcagatcttc
gtgaagaccctcacggggaagaccatcacccttgaggtggaggcaagcgacaccattgag
aacgtcaaggccaagatccaggacaaagaaggcattcccccagaccagcagaggttgatc
ttcgctggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaagag
tccactctccacctggtcctgcgtctgaggggaggcatgcagatcttcgtgaagaccctc
actgggaagaccatcacccttgaggtggaggcaagcgacaccattgagaacgtcaaggcc
aagatccaggacaaagaaggcattcccccagaccagcagaggttgatctttgctggcaag
cagctggaagatggtcgcaccctgtccgactacaacatccagaaagagtccactctccac
ctggtcctgcgtctgaggggaggcatgcagatcttcgtgaagaccctcacggggaagacc
atcacccttgaggtggaggcaagcgacaccattgagaacgtcaaggccaagatccaggac
aaagaaggcattcccccagaccagcagaggttgatctttgctggcaagcagctggaagat
ggccgcaccctgtccgactacaacatccagaaagagtccactctccacctggtcctgcgt
ctgaggggaggcatgcagatcttcgtgaagaccctcacggggaagaccatcacccttgag
gtggaggcaagcgacaccattgagaacgtcaaggccaagatccaggacaaagaaggcatt
cccccagaccagcagaggttgatctttgctggcaagcagctggaagatggccgcaccctg
tccgactacaacatccagaaagagtccactctccacctggtcctgcgtctgaggggaggc
atgcagatctttgtgaagaccctcacggggaagaccatcacccttgaggtggaggcaagc
gacaccattgagaacgtcaaggccaagatccaggacaaagaaggcattcccccagaccag
cagaggttgatcttcgctggcaagcagctggaagatggccgcaccctgtccgactacaac
atccagaaagagtccactctccacctggtcctgcgtctgaggggaggcatgcagatcttc
gtgaagaccctcactgggaagaccatcacccttgaggtggaggcaagcgacaccattgag
aacgtcaaggccaagatccaggacaaagaaggcattcccccagaccagcagaggttgatc
ttcgctggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaagag
tccactctccacctggtcctgcgtctgaggggaggcatgcagnatcttcgtgaagaccct
cacggggaagaccatcacccttga
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