Clupea harengus (Atlantic herring): 105909642
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Entry
105909642 CDS
T09045
Name
(RefSeq) TBC1 domain family member 8 isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105909642
Membrane trafficking [BR:
char04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105909642
Endosome - Golgi transport
Rab GTPases and associated proteins
105909642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
105909642
NCBI-ProteinID:
XP_031436311
UniProt:
A0A6P8GGD0
LinkDB
All DBs
Position
2:963678..997975
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AA seq
1068 aa
AA seq
DB search
MWLTPEEVPVKSALKLWVTEKYNGFFLLQRRRGHGDTGGKFTGMLVGALDTVLDSNARVT
PFRIVLQAPGSQVSWVIASGASLEEVKTHWCWLEVNLLDSLSVFENKDDITSFVNGKIKG
LIADESGGQQDPEGYREAVVRLEQRFGLPPREKLIARLTCCLWKTHVPRQGWMYLTHNHM
AFYSYLLGKEVKLLLPWAEVTGVERVCVGRVTDVLRVRTRTRQRDFSMFLSMDDAMATIT
QLTDLALRRVLPTAGLRTPHTLIHTALTKRALEDHALTQDVLSLFGLPRTESVCEVRVCA
LWTPHLRSHTHGTLYATDSYLCFSSREPGVCSLIIPLSEVLSVEKAETSSVLPDPVIVSV
RGRRAFQMVGVCDRDTLLEAVTDRLRMLRWKHAIYKGQHSQHTPLISPTPYYTFCYDTDG
EADKSQRHVISTRPLISLNQSRMPKHKTAAERRKEALWEERFEEFGRGTHMFRTACLHKL
VAMGIPESLRGDLWLTLSDASSELAAHPGYYAQLVERSLGEVTVATDEIERDLHRSLPEH
PAFQSPFGIDALRRVLRAYAHHNTHIGYCQSMNILASVLLLYAKEEEAFWLLATVCERML
PDYFNRQVIGAQVDQSVFEELLRERVPDLSQNVPDLSALASVSLSWFLTLFLSALPLASG
VCVLDGFFCLGARLIFQLALCVLHTNTHTLCSSSDEGHALMILTSFLEQVRHDEEECACA
DEAAVPAEHTHITALLKEAYERYGDISARQLERLRCRHRIQVLQSHEDTTKENAIRLVTP
EVSLSAEELSDLYDFIKTAHLISVYWGDGVCVSGVCGEGYQLDLPQFESVYAALSPWQEG
AHTDTVARRTFTLLDQNQTNLLTFTQIAHWLDTLYREELNVKIKWLYRLHIPPALMDGED
DSSPLKSPLLSTARPLHVDRPNGESGYEEQLKQMLKDLAKEKEKDAEKPLPPMNQREFIQ
FCKTLSNMFHGDPEESELFQAIAMVTSLLLQIGEAGLRGAALGAGPGPEGDAARADWTVS
LAQILASLLTEPALVAFFERPAGLQARLAMATQQQYQQRAGMLELEHA
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtggctaacgccagaggaggtgccggtgaagagcgcgctgaaactctgggtaacggag
aaatacaacggcttctttctgctgcagcgcaggagggggcacggggataccggcggaaaa
ttcacagggatgctggtcggggccctggatactgtgttggattctaatgcacgtgtcact
ccattccggatcgttctacaggcgcccggctcacaagtcagctgggttattgccagtggg
gcctctcttgaggaagttaaaacacactggtgttggttggaggtcaatctgctggactct
ctctctgtgtttgagaacaaggatgacatcaccagcttcgtcaacggcaagatcaagggc
ctgatagctgatgaatctggcggacagcaggaccctgagggctaccgtgaggcggtggtc
cgtctggagcagcgcttcggtctgcccccgagagagaagctcatcgctcggctcacgtgc
tgcctctggaagactcacgtcccccgccagggctggatgtacctcacacacaaccacatg
gccttctactcatacctgctgggcaaggaagtgaagctgttgttgccgtgggcggaggtg
acgggggtggagcgcgtgtgcgtcggccgggtaacggatgtgttgcgcgtgcgcaccaga
acacgccagcgagacttctccatgtttctgagcatggacgacgccatggcaaccatcacg
caactcactgacctcgccctgcgcagggtcttacccaccgctggactgaggacgccacac
acactcatacacacagcactcacaaagagggcactggaggaccacgccctcactcaggat
gtgttgtccctctttggcctgccgcggactgagagtgtgtgtgaggtgcgagtgtgtgcc
ctgtggaccccacacctccgctcacacacacacggaactctctacgccacagacagctac
ctctgcttcagcagccgagagccaggagtgtgttctcttatcatccctctgtctgaggtg
ttgtcggtggagaaggcggagacgtcgagtgtgttgccagacccggtgattgtgagcgtc
cgcggtcggcgtgcgtttcagatggtgggtgtgtgtgaccgcgacacactcctggaggcc
gtgaccgacagactgcgcatgctacgctggaagcacgccatttataaaggacaacactcg
caacacacaccactgatctccccgaccccctactacacgttttgttatgacacggatgga
gaggcagacaaatcccagagacacgtcatcagtacccgccccctcatctctctcaaccaa
tcacgtatgccaaagcacaagaccgctgctgagcgtcgtaaggaggccttgtgggaggag
cgctttgaggagtttggacgcggcacacacatgttccgcaccgcctgcctacacaagctg
gttgccatggggatccctgagtcgctacggggagacttgtggctcacgctctcagacgcg
agctcggagctggcggcccaccccggctactacgcgcagctggtggagcgctcgctgggc
gaggtcaccgtggcgacggacgagatcgagcgcgacctgcatcgctcccttccggaacac
cccgccttccagagcccctttggcatcgacgcgcttcggagagtcctgagggcctacgca
caccacaacacacacatcggatactgccagtccatgaacatcctggcctctgtgctgctg
ctgtacgccaaagaggaggaggccttctggctcctggccaccgtgtgtgagaggatgctg
cccgactacttcaaccgccaagtcataggggcacaggtggaccagtctgtgtttgaggag
ttgttgcgtgagcgtgttccagacctgtctcagaatgttccggacctgtctgcgctggcg
tcggtgtcgttgtcatggttcctgacgctcttcctgagcgcgctccccctggccagcgga
gtgtgtgtgctcgacggcttcttctgcctcggcgcccgactcatcttccagctcgcgctg
tgtgtgttacacaccaacacacacacactctgcagcagcagcgacgagggacacgcactc
atgatcctcaccagcttccttgagcaggtcaggcatgacgaggaggagtgtgcatgtgca
gatgaagcagcagttccagctgaacacacacatatcacggcactgctcaaagaggcctac
gagaggtatggtgatatcagtgcaaggcagttagaaaggctgaggtgtcgtcatcgcatc
caggtgctgcagtctcacgaggacaccaccaaagagaacgcaatcagactggtgacccct
gaagtgtctctatctgctgaggagctctctgacctctacgacttcatcaagactgcgcat
ctgatcagtgtgtattggggagacggcgtgtgtgtgtcaggtgtgtgtggtgaaggctac
cagctggacctcccgcagttcgagagcgtgtatgccgcactgtcgccatggcaagagggg
gcgcacacggatacggttgctaggcgcaccttcacactgctggaccaaaaccagaccaac
ctgctaaccttcacacagatcgcacactggctggacaccctataccgtgaggagttgaat
gtgaagattaagtggttgtatcgccttcatattcctccagccctgatggatggcgaggat
gactcctcccccttgaagtcgccactgctgtcgaccgcaagaccccttcacgtagaccga
ccaaacggtgagagtggctatgaggagcagctgaagcagatgttaaaggatctggccaaa
gagaaggagaaggatgcagagaagccactgcctccaatgaaccagagggagtttatccag
ttctgtaagacgctctccaacatgttccacggagatcccgaggagagcgagctcttccag
gccatcgccatggtaaccagtctgttgctgcagatcggtgaggcggggctgcgtggcgct
gccttgggggcggggccggggccggagggcgacgcggcgcgtgctgattggacggtgagc
ctggcacagatcctggcgtcgctcctgaccgagccggcactggtggccttcttcgagcgg
cccgccggcctgcaggcacgcctcgccatggcaacgcagcagcagtaccagcagcgggcc
ggcatgctggagctggagcacgcttag
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