Clupea harengus (Atlantic herring): 105909665
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Entry
105909665 CDS
T09045
Symbol
dscamb
Name
(RefSeq) Down syndrome cell adhesion molecule homolog
KO
K06767
Down syndrome cell adhesion molecule
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105909665 (dscamb)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
DSCAM family
105909665 (dscamb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C1-set
fn3_2
DUF6249
Motif
Other DBs
NCBI-GeneID:
105909665
NCBI-ProteinID:
XP_031428771
Ensembl:
ENSCHAG00000016941
UniProt:
A0A6P8FZ65
LinkDB
All DBs
Position
9:23657172..23812583
Genome browser
AA seq
1892 aa
AA seq
DB search
MWILAFIFSQSILNVFSEDLHSSVYFVNASLQEIVFASTTGTLVPCPAAAAPPATLRWYL
ATGEEIYNVPGIRHVHQNGTLQIFNFLPSGFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VFREPYTVRVEDQKAMRGSVAVFKCIIPTFVEAYVSVVSWEKDTNTLGSDPRFHITSSGA
LYILDVVTDDGNWNYRCLTRHRYTGETRQSNSARLTVTEPTNSEPTILDGFDRREVMVSH
RVELPCKATGYPAPKYRWAKDSSPLERDSRFRQVSTGLLIENVRPSDAGSYACEVFNSLG
SAAMVGQLLVKQPLKVVVSPHTLKSSVGSQVSLSCMVTGSEKYDLSWYRNGEMVYRDKRI
SQENLVMDGMVKSDGGVYQCFARRGKMSAQDFAQVILEDGTPKILSAFSERMVNLNEPVS
LVCNVKGTPRPAVTWTLDEEHVGDPGHYRMGQTVTPEGHMLSYLNISHSKVNDSGIYRCS
CNNSAGVVSYQARINVRGPANIRDMKNLTAIAGRDAYIHCRVVGYPYYSIKWFKNSDLLP
FNHRQRAFENNGTLKLSNVQKSADEGEYTCRVQVHPDLEISKSLHVTVKGKGVPQFQAIL
LNTGSRIQLLENGSLLIKHVLQEDSGYYLCKVSNDVGTDISKSMYFTVKIPAMITSYPNT
TLATKGKKKEMSCTAKGEKPIMIRWEKEKEIINPEMSRYVVTVREVGDEVNSTLQIQSPV
RGDSGFFSCHAINSYGEDKGIIQLTVEEPPDSPLVEIRDVQDRIITLHWNMVFDGNSPIT
GYDIEYKNKSAPWSSAISTKNISPSLYQATIIDLHPSSTYNIRMIAKNRINSSAPSNELT
ITTDEASPDGPPQEVQLEALSSQSVKVTWKPPQRHLMNGVIRTYHVSYREYTKEQNRQLT
RITVDATGDQETVTLDNLRKFTLYEVIVNAENRAGMGPASHEGIMRTLEDVPSQAPGNVV
ATPSSPEAIFVYWSPLPNDTLNGVLLGYRVIFWANLADGELGDIRNITTIQPRLELDGLE
KFTNYSIQVLAFTQAGDGVRSGQIFARTKEDVPGPPAGVKAAAASSTEVFVSWLPPIKLN
GIIKKYKIYCSFNYPTVNNDNDAPPDKYFYHIHGLRLNQRYSIWVVAVTAAGPGNASEII
TVEPLEKAPARILTFSGTVTTPWMRDIVLPCRAVGDPAPTIKWLKETNGTPAPVQIDGRR
SVHSNGSFIIRTVKAEDSGYYSCVASNSWGYDDIRLNLQVQVPPDQPRLTVTKTTTTTIT
LSWIPGDNGGSSIRGYILQYSEDNSEKWGSFPISPSERSYRLESLKCGTWYKFTLTAQNA
VGPGRISEIIEAKTHGKEPQFVKEHELFASINSTRVQLNLNGWNNGGCPITSFIVEYRPV
ESPTWTRAQRSSLTKTYILYDLQEATWYELQMKVTNSAGSAEKRINFATPNPDGNTIAPL
LKTVVESRDNLPGNQGLKMVVPIICILVAIGMVFILLLVLRRRRREQRLKRLRDAKSLAE
MLMSKNTRTPDTVNKQQQTLRMHIDIPRAQLLIEERDTMETIDDRSTVLLTDNDFGETSK
QKSSTVTHTVHYQSLSQSTGPLVDVSDARPGTNPTARRTAKAGPATRSRYASQWTLNRPH
PPISSHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARSSMVSTESASSTYEELAR
AYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTNEYTDSLTSSTPSESGICRFTASPP
KPQDASRVMNMAVPKAHRPGGELVHLPPYLRMDFLLNRGVAAASSSSSSSGREATGQTCL
EPQKSRTLKRPALTVAPTPSDSTLPSVSSSGPPSREVQQWQPGTASTLPQREPGDLAQAQ
AAKLSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcttttatcttttcccagagcatcttgaatgttttcagcgaagatcta
cattccagcgtatattttgtcaatgcatctctgcaagagatagtgtttgccagcaccaca
gggaccctggttccctgtccggccgcggcggcgcccccggccacgctgcgctggtacctc
gctaccggagaagagatctacaacgtcccagggatccgccacgtgcaccagaatggcacc
ctccagatcttcaacttcctcccctccggcttcagcaagctcatccacgacaacacgtac
tattgcacagctgaaaacccctcagggaaaatcaggagtcaagatgttcacattaaagcc
gtgttccgggaaccgtatacggtgcgcgtggaggatcaaaaagccatgcgcggcagcgta
gcggtcttcaagtgcattatccctaccttcgtggaggcctacgtctcggtcgtctcgtgg
gagaaggacaccaacacgctcggctcagatcccagatttcacatcacatcctcgggagcg
ttgtatatcctggacgtggtgacggacgatgggaactggaactaccgctgtttgacgcgg
catcgctacacgggcgagaccaggcagagcaacagcgcgcgtctcacagtaacagagccc
accaactcagagcccactatcctggatggctttgaccggagagaagtcatggtgtcccac
cgggtggaactgccctgcaaggcgacggggtacccggcccccaaataccgctgggcgaag
gacagcagccccttagaacgggacagccggttccgccaggtcagcacgggactactaatc
gagaacgtgaggcccagcgatgccggcagctatgcgtgtgaggtgtttaactccctgggc
agcgctgccatggtgggacagctgctggtcaagcaacccctgaaggtggtggtgagccct
cacactctcaagagcagcgtgggcagccaggtgtccctgtcctgcatggtcaccggctcg
gagaagtacgacctctcctggtaccgcaacggcgagatggtctaccgcgataagagaatc
agccaggagaacctcgtgatggacggcatggtgaagagcgacggaggggtgtaccagtgt
ttcgcccggagggggaagatgtcagcccaggactttgcacaggtcatcttggaagacggc
acaccgaagatcctgtcggccttcagtgagaggatggtgaacctgaacgaacccgtgtcg
ctggtgtgcaacgtgaaggggacgccgcggcctgccgtcacctggacgctggacgaggag
cacgtcggggacccgggccactaccgcatgggacagacggtgacaccagagggccacatg
ctgagttacctgaacatctcgcactccaaggtcaacgacagtggcatctaccgctgctcc
tgcaacaattcggccggcgtagtctcctaccaggctcgaataaacgtaagagggccagcc
aacatccgggacatgaagaatctaacagccattgccgggcgggacgcctacatccactgt
cgagtggtgggctacccgtactactctataaagtggttcaagaactctgaccttttgccc
ttcaaccaccgccagcgcgccttcgagaacaacggcacgctcaagctatccaacgtgcag
aagagcgcagacgagggagagtacacctgccgtgtccaggtgcacccagaccttgagatc
agcaagagcctacatgtcaccgtcaaaggtaaaggtgttccccagttccaggcgatcctg
ctgaacacgggttctcgcatccagctgctggagaacggttctctgctcatcaagcacgtt
ctgcaggaggacagcgggtactacctgtgtaaagtcagcaacgacgtgggaaccgacatc
agcaagtccatgtacttcaccgtcaaaatccctgccatgatcacgtcgtaccccaacacc
acgctggccaccaagggcaaaaagaaggagatgagctgcacagccaagggagagaagccc
atcatgatccgctgggagaaggagaaggagatcatcaaccccgagatgagccgctacgtg
gtgacggtgcgcgaggtcggcgacgaggtcaactccaccctacagatccagagtccagtg
cgaggcgactctggcttcttctcctgccacgccatcaactcctacggtgaagataaagga
atcattcagctcacagtggaggagcctccagacagccccctggtggagatccgagacgtg
caggaccgcatcatcaccctgcactggaacatggtgttcgacggcaacagccccatcaca
ggatatgacatcgagtacaagaacaaatcagctccgtggagttccgcgatctccaccaag
aacatctccccctcgctctaccaggccaccatcatcgacctccacccctcctccacctac
aacatccgcatgatcgccaagaaccgcatcaacagcagcgcacccagcaacgagctcacc
atcaccacagacgaagccagtccagacggccctccgcaggaggtgcagctggaggcgctg
tcctcccagagcgtcaaagtcacctggaagcctccacaaaggcaccttatgaacggcgtg
atccgcacctaccacgtcagttaccgcgagtacaccaaagagcagaaccggcagctcacg
cgcatcaccgtggacgccaccggcgaccaggagaccgtcactctggacaacctgcgcaag
ttcacactctacgaggtcatcgtcaacgcggagaacagagctggcatgggccccgcctca
cacgagggcatcatgcgcaccctggaggacgtacccagccaagcccctggtaatgtggtg
gccacccccagttcccctgaagccattttcgtgtactggtcccctctccctaacgacacg
ctcaacggcgtccttctgggctaccgtgtcatcttctgggccaacctggcggacggagag
ctgggagacatcaggaacatcaccaccattcaaccccgcctggagttggacggcctggag
aagttcaccaactacagcatccaggtgctggccttcacccaggccggagacggcgtccgc
agtggccagatcttcgcccgcaccaaagaagacgtccctggtcctcccgccggtgtgaaa
gcagcagctgccagcagcactgaggtgtttgtgtcctggctgcccccaatcaagctcaac
ggcatcatcaagaaatacaagatctactgctccttcaactaccctacggtgaacaatgac
aatgacgctccgcccgataagtacttctaccacatccacggcctgcgtctcaaccagagg
tacagcatctgggtggttgccgtgactgcagctggccccggcaacgccagtgagatcatc
accgtggagccgctggagaaagcccctgccaggattctcacgttcagtggtacggtcacc
accccctggatgagggacatcgttttaccctgcagggctgtgggagatcccgcccccacc
atcaaatggctgaaggaaaccaacggcacccctgctccagtccagattgacggccgtcgc
agtgtgcatagcaacggtagcttcatcatccgcactgtcaaagcagaggattctgggtac
tacagctgcgtggccagcaacagctggggatacgatgacatcagacttaaccttcaggtt
caagtgccaccagaccagccgcgtctcaccgtcaccaagacgaccaccaccaccatcacg
ctgtcttggatcccaggagacaatggaggcagctccatcagaggctacatcctgcagtac
tctgaggacaacagtgagaagtggggcagttttcccatcagccctagcgagcgctcgtac
cgtctggagagcctcaagtgtggaacgtggtacaagttcacccttactgcccagaacgct
gttggacccggacgtatcagtgagatcattgaggccaagacacatggcaaagagcctcag
tttgtgaaggagcacgagctgttcgccagcatcaactccacgcgagtgcagctcaacctg
aacggctggaacaacggcggctgccccatcacgtccttcatcgtggagtaccggccggtg
gagagccccacctggacgcgggcgcagcgcagctcgctcaccaagacctacatcctgtac
gacctgcaggaggccacctggtacgagctgcagatgaaggtgaccaacagcgccggctct
gcggagaagcgcatcaacttcgccacgcccaacccagacggaaacaccatagcccccctg
ctgaagacggtggtggagagcagggataatctgcccggcaaccagggcctgaagatggtg
gtacccatcatctgcatcctggtggccatcggcatggtcttcatcctgctactggtgctg
aggaggaggaggagggagcagaggctcaagagactacgggatgccaaaagcctagctgag
atgttaatgagtaagaacacccggacgccggacacagtgaacaagcagcagcagacgctc
cggatgcacatcgacatcccgcgggcgcagctgctcatcgaggagcgtgacaccatggag
acaatcgatgacaggtccactgtgttgctgactgataatgactttggggagacgtccaag
cagaagtcctccactgtcacgcacacagtccactaccagtccctgtcccagagcaccggg
ccgctggtggatgtgtctgacgcccgacctggaacaaaccccactgcccgccgcacagcc
aaagccggccccgccacccgcagccgctacgccagccagtggacgctgaaccgcccgcac
ccgcccatctcctcgcacacgctcaccaccgactggcggctgcccacgccccgcgccacc
ggttccgtggacaaggagagcgacagctacagcgtcagtccctcccaggacacagaccga
gcacggagcagcatggtgtcgacggagagcgcctcgtccacctacgaggagctggcgcgg
gcctacgagcacgccaagatggaggagcagctacggcacgccaagttcaccatcaccgag
tgcttcatctcggacacgtcgtcagagcagatgacagccggcaccaacgagtacacggac
agcctgacgtccagcacgccctccgagtcggggatctgccgcttcaccgcctcgccgccc
aagcctcaggatgccagccgcgtcatgaacatggccgtgcccaaagcccacagacccggt
ggtgagctggtgcacctgcccccgtacctgcgcatggacttcctgctgaaccgcggcgtg
gcggcggcgtcgtcgtcctcgtcgtcgtcgggccgcgaggccacgggccagacctgcctg
gagccgcagaagagccgcacgctgaagcggccggcgctcacggtggcgcccacccccagc
gactccacgctccccagcgtctcctcctcggggccccccagccgcgaggtgcagcagtgg
cagccagggacagcctccactctgccccagcgcgagcccggagacctggcccaggctcag
gccgccaaactcagcagctcccaggagtcgctgctcgactccagaggacacctcaaacag
agcaacaacccttacgcaaagtcctacaccctggtataa
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