Clupea harengus (Atlantic herring): 105909687
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Entry
105909687 CDS
T09045
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04517
IgSF CAM signaling
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
105909687
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105909687
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105909687
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
105909687
Intermediate filaments
Intermediate filament-binding proteins
105909687
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
TMP_3
Motif
Other DBs
NCBI-GeneID:
105909687
NCBI-ProteinID:
XP_031429734
Ensembl:
ENSCHAG00000002896
UniProt:
A0A6P8FT35
LinkDB
All DBs
Position
9
Genome browser
AA seq
2637 aa
AA seq
DB search
MAKASTDLDNAEAQRQLNNNNRPVSTGHWETETTSAKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLMWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIHNFTGCWRDGLAFNALIHRHRPDLIEFHKLARSNATHNLQQAFNVA
EQNLGLTKLLDPEDVNTENPDEKSIITYVVSFYHYFSKMKALIVEGKRIGKVLDNAIEAE
QIIDRYEELASELLEWIEKTISVISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKLYVPHEGKLISDINKAWERLEKAEHERGVALRTELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEDRIGVV
VELASEMEAESYYDIRRISARKENILGQWKLLKELVIGRKVRLEKNLALQKTFQEMVYMI
DWMEEMQIQLLSKDFGKHLLEVDDLLQKHSLQETDISVQAERVQTLNTAALKFTAIEGYQ
PCDPQVICNRVNHVSTCLEELNQLAAKRRAELEESRQLWAFYEELEESEAWIREKTSILS
TQTCGKDLSSVLRLLQNHKSLTVELLSRRSLLQQTMKKGKQILTEKSFGTGGIQERVMEA
KAEWKRLEDHAAQRLGHLQEALDFFQFTAESDDLLFWLQDIYRLVSSEDFGHDEYSTRSL
LKKHRCVRESLDKHRVNAVALRKHAVGLSPQYRQLDEVQARMGEVEQLYAEVAEVAVLRQ
QWLHDALAVYHMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDNGHPSSTEVRGCQDHLNSRWNRIVELVEHKKDHLDSVLRIQNYLL
ESAEIKSQIQDKRKAIDATQYVGSDLGSVLALQRRLSTMEGALSVLEPKLLLLQQEAEEL
AIAHPDKAVEVLVPFEGISLEWEELKRTLQGCEDSLTVAGRLQQFIQDLDSFLTWLVQTQ
TAAAADELPNTLEEAERLINCHAALKEEIGRYEEDYERLQAVNELLEAEEAPLPYAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFMRDVKQAEAFLNNQESALAHVELPTTVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSERIKERVEALANRGNQNRE
LAQEWLSKLNGQWELQSFLQDCHELGDWVAEKMLMARDTSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEKEGQQLIEEKPELREVVVQKLGEIRECWQDLESTTQAKARQLFEANRA
DLLVQSYSSLDHRLGQLENQLSYEDYGQDLTTVNKHLKKLQTMESQMEEWYQEVGELQQE
AASLPPQGQRMEHVGERQAVVESRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILWVQ
ERLPLATSHEHGTSLQEVQQLMKKNQTLQRELQGHRARMEDVLERASLIASIRSPEAECV
RDGLEQLAGLWEALWLETEHRQLALDAMYQAQQYYFDVSEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLEQSIEDYAETIGLLSQQCRQLLELGHPDSDQISKRQSQIDRLYVSL
KDLLEERKSRLEQQYWLYQLSREVDELEQWIAEREVVASSPELGQDFEHVTILQEKFTEF
ASETGSMGQERVTAINQMVDELIDYGHGDAATIAEWKDGVNEAWADLLELMETRGQLLAA
SHQLHKFFSDCREVLGQIDDKQRRLPEVRAQQGDTANTSTLQRLMHTFEHDIQLLVNQVR
QLQESSAQLRTVYAGEKAEAIARREHEVMHAWKELLVSCEECRVQITTATDKLRFFSMVR
DQLTWMESIISQIGTAEKPRDVSSVEVLMNYHQSLKSEVEARNKSVMQCIEMGKTLLAAR
NPASEEINDKLERVLLKQRELSEKWDRHWEFLQQMLEVHQFAQEAVVAEAWMTAQEPLIS
SSELGSSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKIKAEQSKLPPTPLLGRK
VFLEPQEVSPARSATSARLRHTIYEQQAVEARSERPQPSPSSVARRLGSTVANYTPVLNG
SAYTRSIEARTSGLVGVAAGLGMTPAPVAASLPVTLVTAPAEAAAEPEVKFAGLRPEQRS
ERILRKLAAQKPQDSIEHFSELIRPMLDRERQRQDREHDSHERPCGEVGVMAEVVLQDPP
LGRERLNSEARSGELRISAGGGGGGSGGSSRSELQAELHQPPHHHGHHRLERQLSNEQLV
QARRDELPQELWRERAERERRLERQTSSEQEGGLGGDLYREKRSTLADIVEQLQEREAAA
ARGEAPLLPNGVPEKAARPERPRARDRPKPRRRPRPKEPSGGEPRRSRSAPAQSSPPVPQ
TPSHTAQYEGFLFRKLDIESQKKAANRSWANLYCVLSKGEIGFYKDAKNTATPYNNEPLL
SLSGCTCDVTNGYKKKKNVFTLKTKDGSEFLFHARDEDDLKGWVSSITQSINEYDEIANW
GKPQPTTSSTDEGTRRDARKSEAEKSERGGEKSDRGDRVSERSDKGEKPEKRTGKKK
NT seq
7914 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcctccacggacctggacaatgcggaggcccagcggcagctcaacaacaac
aaccggcccgtcagcacaggacactgggagaccgagaccaccagcgccaagctcttcgag
tgctcccgcatcaaagcactagcagatgagcgagacgcagtgcagaagaagacattcact
aagtgggtgaactcccacctggcacgggtgtcctgcaggatcgctgacctgtacaatgac
ctgagagacggctacatgctcaccaggctcctggaagtgctgtcgggagaaatgctgcca
aggcccactcgcggccgcatgcgtatccactgcctggagaacgtggacaaggctctgcag
ttcctcaaagaacagcgggtccacctcgagaacgtcggctcccacgacatcgtcgacggc
aaccaccgcctgaccctcggccttatgtggaccatcatcctccgcttccagatccaggtg
atcaagattgagacggaggacaacagagagacccgatcagccaaggatgcccttctgctg
tggtgccagatgaaaacagcagggtaccctgaggtgaacattcataacttcaccggctgc
tggagggatggcctggctttcaacgcactcatccacaggcacagacctgatttaatcgag
tttcacaagctggcccggtcgaatgccacacacaacctccagcaagccttcaacgttgcc
gaacagaaccttggcctcaccaagctcctggatccagaagacgtgaacacggaaaatcca
gacgagaagtccatcataacctacgtggtctccttctaccactacttctccaagatgaag
gcccttatagtagaggggaaaagaataggaaaggttctggacaacgctattgaggcggag
cagatcatcgatcggtacgaggagctggcgtcggagctactggagtggatcgagaagacc
atcagcgtcatcagcaaccagaagttcgccaactccctcaccggcgtccagcagcagctg
caggccttcacaacctactgcaccatcgaaaagcccattaagttccaggagaagggcaac
ctggaggtgctcctcttcaccatccaaagcaagctcagagctaacaaccagaagctatac
gtgcctcacgaagggaagctcatctctgacatcaacaaggcgtgggagaggcttgagaag
gcggagcatgaaaggggcgtggccttaaggacagagctgattcgtcaggagaagctggag
ctgctggctcagcgcttcgaccacaagaccaccatgcggcaagcatggctgaacgagaac
cagcggctagtctcacaagacaactttggctacgacctgccagcagtggaggcggccatg
aagaaacacgaggccatcgaggcggacatctcgtcctacgaggaccgcatcggcgtggtg
gtggagctggcgtccgagatggaagcagagagctactacgacatccggcggatctccgcc
cgcaaggagaacatcctgggacagtggaagcttctcaaggagctcgtgatcggcaggaag
gtgcggctagagaagaacttggccctgcagaagaccttccaggagatggtctacatgatc
gactggatggaggagatgcagatccagctgttgtccaaagactttgggaaacacctgctg
gaggtggacgacctgcttcagaagcacagcctccaggagactgacatctctgtgcaggcc
gagagggtccagaccctcaacactgccgccctcaagtttaccgccatcgaaggttaccag
ccctgcgacccgcaggtcatctgtaaccgggtcaaccatgtcagcacgtgcctggaggag
ctgaaccagctggctgccaagcgccgcgccgagctggaggagtccagacaactctgggcc
ttctacgaggagctggaggagtcggaggcctggatccgcgagaagacgtccatcctgtcg
acgcagacgtgcggtaaggacctgagcagcgtgctgcgcctgttgcagaaccacaagagc
ctgacggtggagctgttgagccggcggtcactgctgcagcagaccatgaagaagggcaag
cagatcctgacggagaagagcttcggcacgggaggcatccaggagcgcgtgatggaggcc
aaggccgagtggaagcggctggaggaccacgccgcgcaacgcctgggccacctgcaggag
gcgctggacttcttccagttcaccgccgagtcggacgacctgctgttctggctgcaggac
atctaccggctggtgtccagcgaggacttcggccacgacgagtactcgacgcgctcgctg
ctcaagaagcaccggtgcgtgcgcgagagcctggacaagcaccgcgtcaacgccgtggcg
ctgcgcaagcacgccgtggggctgtcgccgcagtaccggcagctggacgaggtgcaggcg
cgcatgggcgaggtggagcagctctacgccgaggtggcggaggtggctgtgctccggcag
cagtggctgcacgacgcgctcgccgtctaccacatgttcagcgaggtcaacgcctgcgag
gtgtggattgacgagaaggagcagtggctcaacaagatggaggtgcccgagaggctggag
gatgtggaggtggtggcacacaggttcgagagcctagaccaggaaatgaacagcctgatg
ggaagaatactggatgtcaatcaaatagtgcaacagctcctggacaacggccaccccagc
tccactgaggtccggggctgtcaggaccatctcaacagccggtggaaccgcatagtggag
ctggtggagcacaagaaggaccacctggactcggttctgcgcatccagaactacctgctg
gagtccgccgagatcaagtcccagatccaggacaagcgcaaggccatcgacgccacccag
tacgtgggcagcgacctgggcagcgtgctggctctgcagcggcgcctctccaccatggag
ggcgccctgtccgtgctggagcccaagctgctcctcctgcagcaggaggcggaggagctg
gccatcgcgcacccggacaaggccgtggaggtgctcgtgcccttcgagggcatcagcctg
gagtgggaggagctgaagaggacgctgcagggatgtgaggactcgctcacggtggctgga
cgactgcagcagttcatccaggacctggactccttcctgacgtggctggtccagacgcag
acggcggcggccgcggacgagctgcccaacacgctggaggaggccgagcggctcatcaac
tgccacgcggcactcaaggaggagatcggccgctacgaggaggactacgagcggctgcag
gccgtgaacgagctgctggaggctgaggaggcgccgctgccctacgccgcgctgcagcag
tggctccagaagctggacgtgggctggaacaagctgctggagatgtgggagagccgccga
gaggtgctggtgcaggcgcacatcttccacctcttcatgcgcgacgtcaagcaggccgag
gccttcctcaacaaccaggagtcggcgctggcccacgtggagctccccaccacggtggag
acggtggaggcggccatcaagaagcacaaggacttcaccaccaccatggagctgaacctg
caccgcatcaaagccgtcatcgaggccggggagagcctcatcagccagagcaacatctac
tccgagcgcatcaaagagcgcgtggaggccctcgctaacagggggaaccagaaccgtgaa
ctggcccaggagtggctcagcaagctcaacggacagtgggagctgcagagcttcctgcag
gactgtcatgagctgggcgactgggtggcggagaagatgctcatggcacgcgacacgtcc
cgagacgagacccagaagctgcacaagaagtggctgaagcaccaggccttcatggccgag
ctcgcccagaacaaagagtggctggacaagatcgagaaggaggggcagcagctgatcgag
gagaagccggagctgagggaggtggtggtgcagaagctgggggagatccgcgagtgctgg
caggacctggagagcaccacccaggccaaggcccggcagctcttcgaggccaaccgggcc
gacctgctggtccagagctactccagcctggaccatcggctgggtcagctggagaaccag
ctctcctacgaggactacggccaggacctcaccaccgtcaacaaacacctcaagaagctc
cagacgatggagtcacagatggaggagtggtaccaggaggtgggggagctgcagcaggag
gcggcctctctcccgccgcagggccagcgcatggagcacgtcggggagaggcaggccgtg
gtggagtcgcgcatcgtgcgcctcatcgagcccctcaaggagcgccgacgcatcctgctc
gcctccaaggaggtgcatcaagtgggacgcgacctggaggacgagattctgtgggtccaa
gagcgcctcccactggcaacatcgcacgagcacggcacctccctacaggaagtgcagcag
ctcatgaagaagaaccagacgctccagcgtgagctgcaggggcaccgtgcgcggatggag
gacgttctggagcgggcgtctctcatcgcctccatccgcagcccggaggcggagtgcgtg
cgggacggcctggagcagctggcggggctgtgggaggcgctgtggctggagacggagcac
cggcagctggcgctggacgccatgtaccaggcccagcagtactacttcgacgtgtccgag
gtggaggcctggctcagcgagcaggagctgcacatgatgaacgaggagaagggcaaggac
gagccgagtacgctgcagctactgaagaagcacctggtgctggagcaaagcatcgaggac
tacgccgagaccatcggcctgctctcacagcagtgccggcagctgctcgagctcggacac
cccgacagtgaccagatcagcaagcgtcagtcccagatcgaccgcctctacgtgtccctg
aaggacctgttggaggagcgcaagtctcgcctggagcagcagtactggctctaccagctg
agccgggaggtggacgagctggagcagtggatcgccgagagggaggtggtggccagctcc
cccgaactgggccaggactttgagcatgtcacgatcctccaggagaagttcaccgagttc
gcctcagagaccggcagcatgggccaggagcgggtgactgccatcaatcagatggtggac
gagctgatcgactacggccacggcgacgccgccaccatcgcagagtggaaggatggcgtg
aacgaggcctgggccgacctgctggagctgatggagacgcgcggtcagctgctcgccgcc
tcacaccagctgcacaagttcttctccgactgccgcgaggtcttgggtcagatcgatgat
aagcagcggcggttgccggaggtgcgcgcgcagcagggagacacggcaaacaccagcaca
ctgcagaggctcatgcacacctttgagcatgacattcagctgctcgtcaaccaggtcagg
cagctgcaggagagttcggcccagctgcggacagtctacgcgggggagaaagcagaggcc
attgccaggcgggagcacgaggtcatgcacgcctggaaggagctgctcgtctcgtgcgag
gagtgccgtgtgcagatcaccacggcgaccgacaagctgcgcttcttcagcatggtgcgc
gaccagctcacgtggatggagagcatcatcagccagattgggaccgcggagaagcccagg
gatgtgtcctctgtggaggtcctgatgaactaccaccagagcctgaagagtgaggtggag
gcccgcaacaagagcgtgatgcagtgcatagagatgggcaaaaccctgctggccgcgcgg
aaccccgcctcggaagagatcaatgataagctggagagggtgttgttgaaacagagggag
ctgtctgagaagtgggacagacattgggagttcctccagcagatgttggaggtgcaccag
tttgctcaggaggcagtggtggcggaggcctggatgacggctcaggagcccctaatcagc
agcagcgagctgggctccagtgtagacgaggtggagcagctgattcgccgacacgaggcc
ttccgcaaggcggccgccacctgggaggagaggttcagctcccttagacgccttaccacc
gtggagaagatcaaggcggagcagagcaagctcccgcccacaccgctgctgggccgtaag
gtgttcttggagccgcaggaggtgtcgccggcacgtagcgccacttctgcccgcctgcgc
cacaccatctacgagcagcaggcggtggaagcgcgctccgagagaccccagccctcgccg
tcgtccgtggcgcgccgcctgggctccaccgtggccaactacacgcccgtcctcaacggc
tccgcctacacgcgcagcatcgaggcccgcaccagcggcttggtgggtgtggcggcaggt
ctgggcatgactcctgccccggtggctgcgtcgctgccggttaccctggtgacggccccg
gcagaggcggcagcggaaccagaagtgaagtttgccgggctgcgacccgagcagcggtcg
gagcggatcctgcgcaagctggcggcgcagaagccccaggacagcatcgagcacttcagc
gagttgatccgccccatgctggaccgcgagcggcagcggcaggaccgcgagcacgacagc
cacgagcggccctgcggagaggtgggcgtcatggccgaggtggtgctgcaggacccgccg
ctgggtcgcgagcgcctcaacagcgaggcccgcagcggggagctccggatcagcgccgga
ggaggaggaggaggcagcggcggcagcagccgctccgagctgcaggcggagctgcaccag
ccgccccatcaccacggccaccaccggctggagcggcagctgtccaacgagcaactggtg
caggcgcggcgggacgagctgccgcaggagctgtggagggagcgggccgagcgggagagg
aggctggagagacagacgtccagcgagcaggaggggggactaggaggagacctttacagg
gaaaagaggtccaccttagctgacatagtggagcagcttcaggagagagaggcagcagct
gctcgaggtgaggccccacttctgcccaacggcgtgcccgagaaggccgcccgaccggag
cgcccgcgagcccgagaccgacccaagccacgcaggagaccccgacccaaagagcccagc
ggaggagagccgcggcggtcccggtccgccccggcccagagcagcccgcccgtgccccag
acgccctcacacacggcccagtacgagggcttcctcttccgcaagctggacatcgagagc
cagaagaaggccgcaaacaggtcttgggccaacctctactgtgtgctgtccaagggcgag
atcggcttctacaaggacgccaagaacaccgccacaccttacaacaacgaacctctgctt
agcctcagtggctgcacctgtgacgtgaccaacgggtacaagaagaagaagaacgttttc
acgctcaaaacaaaagatggaagtgagttcctgttccatgcgagagatgaggatgatctg
aagggctgggtctcgagcatcacccaaagtatcaacgaatacgacgagatcgccaattgg
ggcaagccccaacctactacctcttccacggatgagggcacgcggcgcgatgccaggaag
tcggaggcggagaagtcagagcgggggggcgagaagtcggaccggggcgaccgggtctcc
gagcgctccgacaagggcgagaaacccgagaagcgcacggggaagaagaagtga
DBGET
integrated database retrieval system
