Clupea harengus (Atlantic herring): 105909692
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Entry
105909692 CDS
T09045
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105909692 (rnf169)
03400 DNA repair and recombination proteins [BR:
char03400
]
105909692 (rnf169)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
105909692 (rnf169)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
105909692 (rnf169)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
105909692 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
Prok-RING_4
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
105909692
NCBI-ProteinID:
XP_012693788
UniProt:
A0A6P3WAJ8
LinkDB
All DBs
Position
9:22247900..22253632
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AA seq
674 aa
AA seq
DB search
MKMAALGSAKSASRLGQKGRTRPATVPCIHTPARVPTIEEVRCPVCLDILLEPVTMPCRH
SVCLHCFQRTVQFSLCCPRCRLRVSSWARKQSREKRLVNTELWDMVRKSYPDKCKRRMEQ
RAGEAVGDEIFRSLAQICKTGDLRQDHDKQNLKVGTNENKEEKKRKPAVHRKEESNAMKH
FQDPLCGVLSDSENEEPIGRRTRHVSAFVRKTRTSPAFSRSLPNSLVKRSRSCTDSDDHR
GKTRGLSHAPVPHKVSIVHSFNAGILLSSENSRSLSAPVLISDRRHPWRNVLATSTPFPV
PLSKPERSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVMEPTIVKSTPRNLSRNL
QKHTSYEASPSILQKWRQIEVDRQSIIKVTSKGTVTSPIAEELAVKEVPPKERDGGKFCS
CVPARERALGSFCTCGRQPESVGAEKEKSVASNKRRLIFDDCVGEAGLSRQSLSISSSSA
TLPKPESSGTERGRANQLEGCTSGQLPEIQGPPISVGKEQKVSVSDGHAGPGVCNQKGLD
TPNQQKESNVRNCAQSRPTSRRGKKRSQKTKHLEEAKSQAKKTRTQDQADDQEEARGRGV
DLYVQRLHQEREDRQLALRLQRQLDKECKKINRQKTSPDKYPLRSWATADSQMEYNPRRS
GRISKKNEHFNYNC
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcggcgttggggtccgccaaatccgccagcagattaggacagaaaggaaga
accaggcccgctacagtaccttgtattcacacacctgcacgggtgcccactatagaagag
gtcaggtgtccggtgtgtttggatattttgttggaacccgtgactatgccatgtcggcac
tcagtatgtctgcattgtttccagcggactgtgcagtttagtttatgctgtccccgttgc
cggttgcgggtgtccagctgggcccgtaaacagtcccgtgagaaaagactggtaaacacc
gaactctgggatatggttcggaagagttatccagacaaatgcaagcgccggatggagcaa
cgagcaggagaggccgtgggagatgagatattccgctcactggcacaaatttgcaagaca
ggagatcttcgacaggaccatgacaaacaaaatctgaaggtggggaccaatgaaaacaaa
gaggagaagaaaagaaaaccagccgtacatagaaaggaagaatctaatgccatgaaacac
tttcaagaccctttgtgtggagtgctctccgactcggagaacgaagagccaattggaagg
aggacaaggcatgtatcggcttttgtccgcaaaacaagaacctctccagcctttagcaga
agtctcccaaacagtttggtgaagagaagccggagctgcactgattctgacgaccacagg
ggaaaaacgagagggctttcacacgcccctgtgccacacaaggtcagcatcgtgcacagc
ttcaatgctgggatccttctgtcgtcggagaacagccgctccctctcagccccggttctc
atctcggaccgccggcacccctggaggaacgtactggccacctccactccgttcccggtt
cccttgtctaaacccgagaggtccatcagccctgagagcaacgacagcatatccgaggag
ctgaaccacttcaagcccatcgtttgctcaccttgcacccctcccaagcggcttccggac
ggacgcgtgatggagcccaccatcgtgaagtccacgccccgcaacctgagccgcaacctg
cagaagcacaccagctacgaggccagcccctcaatcctgcagaaatggaggcagatcgag
gtggaccggcagagcatcatcaaggtcacctcaaaggggaccgtcaccagccctatcgca
gaggagctcgccgtcaaggaagtccctccaaaagagagggatggtggcaagttctgctcc
tgtgtcccagcgagggaaagggcactaggaagcttctgcacgtgtggtagacaaccagaa
tctgttggagcagagaaggagaaaagtgttgccagcaacaagcgcagactgatatttgac
gactgtgtcggagaggcaggactctccaggcagtcattgagtatcagctcttcttcagca
acactgcctaaaccggagtcttctggaactgaacgtggacgtgcaaaccagctagaaggt
tgcacttcaggccagctccctgaaatacaaggcccacccatatcagttggcaaggagcaa
aaggtgtctgtgtctgacggacatgcggggcctggcgtttgcaatcagaaaggtttggac
acaccaaaccagcagaaagagtccaacgttaggaactgtgctcagagcagacctacctca
aggaggggcaagaagcgtagccagaagaccaaacacctggaggaggcaaaaagtcaggca
aagaagaccagaacacaggaccaggcggacgaccaggaggaggctcgtggccgaggggtc
gatttgtatgtgcagcgactccaccaggagagggaggacagacagttggcgctcaggctt
caaagacagcttgacaaggaatgtaaaaaaattaacaggcagaagacaagtcccgataag
tacccgcttcgatcgtgggccaccgcagacagccaaatggaatacaatccgcggagatca
ggaagaatctctaaaaagaacgagcactttaattacaactgttaa
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