Clupea harengus (Atlantic herring): 105909725
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Entry
105909725 CDS
T09045
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105909725 (trim59)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105909725 (trim59)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-B_box_ZFPL1
zf-RING_6
TRAF3_RING
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
105909725
NCBI-ProteinID:
XP_012693821
Ensembl:
ENSCHAG00000015649
UniProt:
A0A6P3WAJ7
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All DBs
Position
9:complement(21681245..21684827)
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AA seq
419 aa
AA seq
DB search
MDNLEEDLTCSVCYSLFSDPRVLPCSHTFCKSCLDGVLHVSTNYSIWRPLRLPLKCPNCR
SVVELPPNGVEALPINVSLRAIIEKYQREGQHSRPPTCPEHPRQPLNVYCVQDRTLICGF
CLTVGQHQGHAIDDLQTAYVKERDAPARLVQQLTDNRWAEVCGLGEQLEQEKTRCEGLVR
QDREAVAQFFQGVELLLCRKKEEYLAALDVASVELAHSYDPLIEKLKDMKEEQLSLISLS
SSVQDEDSPLAFLEKVHLFRARVKSLTQIPMPKVVPLCISPRASEYLRDHWAKVTIGGLE
QGPVPKVACHARGCLVKHVLPSGFSGVWLNPRLHLLPLIALLVVLVAAGLYLDPFGGASL
VLSMLTPLGELFRSLTDQLVWPFDIQGPLEDLASNVSASISSLADRTYQYFAFFLQALQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggataacctggaggaggacctgacgtgctcggtgtgctactcgctgttcagcgacccc
cgcgtgctgccctgctcgcacaccttctgcaagagctgcctggacggcgtgctgcatgtc
tccaccaactactccatctggcgcccgctccgcctgcccctcaagtgccccaactgccgc
agcgtggtggagctgccgcccaacggcgtggaggcgctgcccatcaatgtctcgctgcgc
gccatcatcgagaagtaccagcgcgaaggccagcactcgcgcccgcccacctgccccgag
cacccgcgccagccgctcaacgtctactgcgtccaggaccgcacgctcatctgcggcttc
tgcctcaccgtcggccagcaccagggccacgccatcgacgacctccagacggcctacgtc
aaggagcgggacgccccggcgcggctcgtgcagcagctgacggacaatcgctgggccgag
gtgtgcggcctcggggagcagctggagcaggagaagacgcggtgcgagggcctggtgcgg
caggaccgcgaggccgtggcccagttcttccagggcgtggagctgctcctgtgccgcaag
aaggaggagtacctggcggcgctggacgtggccagcgtggagctggcacacagctacgac
ccgctcatcgagaagctgaaggacatgaaggaggagcagctgagcctcatctcgcttagc
tcgtctgtgcaggacgaggactccccgctggccttcctggagaaggtgcacctgttccgg
gcacgcgtcaagtccctcacccagatccccatgcccaaagtggtgcccctctgcatctcc
ccccgggccagcgagtacctgagggaccactgggccaaggtcaccatcggaggcctggag
cagggacctgtccccaaggtggcctgtcacgccagaggctgcttggtgaagcacgtcctg
ccctctggcttctctggagtctggctgaacccccggctgcacctgctcccccttatcgcc
ctgctggtggttttggttgctgcaggtctgtacctagatccattcggaggagcgtctctg
gtgctctccatgctaaccccactcggtgagctcttccgaagcctgaccgatcaactcgtt
tggccctttgacatccagggaccactggaggatctagcctcgaacgtctcagcaagcatc
tcttccttggccgacagaacataccaatactttgcctttttccttcaggctttgcagtaa
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