Clupea harengus (Atlantic herring): 105909736
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Entry
105909736 CDS
T09045
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105909736 (rffl)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
105909736 (rffl)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
105909736 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
zf-RING_5
FYVE
Prok-RING_4
zf-RING_2
HeH
CDC27
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
105909736
NCBI-ProteinID:
XP_031429705
Ensembl:
ENSCHAG00000019983
UniProt:
A0A6P8G2L4
LinkDB
All DBs
Position
9:complement(22040140..22055881)
Genome browser
AA seq
399 aa
AA seq
DB search
MWASCCNWFCLDSATGDEGGGNTRHQAYTNSGFSSFPSPTAVDHTCKACGGRFDTLTRKH
MCMDCKKSFCSRCSAQLELQPRLCLTCQRLCATLFDRAELMKLKVKDLRDYLHLHQVPTQ
MCREKEELVELVLGQQTPAANATSQATANVRVTQQQPPPPPQPPPPAAVPPQHVHTRAPS
SAHTHHTSQQNGQTAPMAGPVSAGPTVTQPRSEPHRPPTPPVQEDSQSLSALAPSALAPS
APEEGPEDEADTELRGEQESQSSDTEEVLVPGRRASLTDLLSAEDIEALSVRQLKEILAR
NFVDYKGCCEKWELMERVTRLYHDQKDLQNLVSNASDGTDLPSGPVIEENLCKICMDSPI
DCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVFRS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcctcgtgctgtaactggttctgtctggactctgctacaggggacgaggggggg
ggcaacacgcggcaccaggcctacaccaactccggcttcagcagcttcccctcgcccacc
gccgtggaccacacctgcaaggcctgcgggggacgcttcgacacactgaccaggaagcac
atgtgcatggactgcaagaagagcttctgcagccgctgctccgcgcagctggagctgcag
ccacggctctgcctgacgtgccagcgcctgtgcgccacgctgtttgaccgcgccgagctg
atgaagctgaaggtgaaggacctgcgcgactacctgcacctgcaccaggtgcccacgcag
atgtgccgcgagaaggaggagctggtggagctggtgctcggccagcagacgcccgccgcc
aacgccaccagccaggccaccgccaacgtgcgggtgacgcagcagcagccgccgccgccg
cctcaaccaccgccgccggcggcagtgccaccgcaacacgtacacacgcgcgcaccgagc
agcgcccacacacaccacacatcgcagcagaacggacagacggcaccaatggcaggcccg
gtgtctgcgggtccgaccgtaacccagccgcgctcagaaccacacaggcctccgacgccg
ccggtccaggaggactcacagagcctgtctgcgctggcgccctctgcgctggcaccctct
gcgccagaggaggggccggaggatgaggcagacacggagctgcggggagagcaggagtcg
cagtcctctgacacagaggaggtgctggtccctgggcgaagggcgtctctgacggacctg
ttgtcggcggaggacatcgaggctctgagcgtgcggcagctgaaggagatcctggccagg
aactttgtggactacaagggctgctgcgagaagtgggagctgatggagagggtcacgcgc
ctctaccacgaccagaaggacctgcagaacctagtttcaaatgcctctgatggcacagac
ttgccctccggcccggtcatcgaggagaacctgtgcaagatctgcatggactcgcccata
gactgcgtcctgctggagtgcggccacatggtcacctgcaccaagtgtggcaagcgcatg
agcgagtgccccatctgcaggcagtatgtggtgcgcgccgtgcacgtcttccggtcctag
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integrated database retrieval system
