Clupea harengus (Atlantic herring): 105909739
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Entry
105909739 CDS
T09045
Symbol
ikzf1
Name
(RefSeq) DNA-binding protein Ikaros isoform X3
KO
K09220
IKAROS family zinc finger protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105909739 (ikzf1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105909739 (ikzf1)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105909739 (ikzf1)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105909739 (ikzf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_REST
zf-C2H2_11
zf-H2C2_5
GAGA
CPSF100_C
Motif
Other DBs
NCBI-GeneID:
105909739
NCBI-ProteinID:
XP_012693850
Ensembl:
ENSCHAG00000019263
UniProt:
A0A6P3WAN2
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Position
13:14065605..14084948
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AA seq
634 aa
AA seq
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MAASDGLLGVSFYWHDTKQCAKGCCLDSLSRIGLWNKSLQNAPFEHRDIAMLGWNEEVQW
RGEGPRAEFHSAAAALRTSAHGAGESWKSFILQSQGIAEYLQRMETEEAQEMSQIPGRDS
PLANEASEEMDEAMPVPEDLSATSSLQQNNRTDKSLACNIKVEARSDEENGMACEANGEE
EEEEEEEGAEDLRVLDASGAKVNGSHAGADSKVSYPAAGGIRLPNGKLKCDICGIVCIGP
NVLMVHKRSHTGERPFQCNQCGASFTQKGNLLRHIKLHSGEKPFKCHLCNYACRRRDALT
GHLRTHSVGKPHKCAYCGRSYKQRSSLEEHKERCHNYLQCMGLQNSIYTVVKEESNLGEQ
REDISLTGPERALVLDRLANNVAKRKSSMPQKFVGEKRLSDLSFEGNGGELMQPHVIDQA
INSAISYLGAESLRPLVQTSPGSSSDVVVGSIYQLHKAPGDVSLSAKDSAAENLLLLSKS
KSASEKDGSPSPSGQDSTDTESNNEDRPAGGGPGAASAGLIYLTNHMAPGMRNGGALPLV
KEEHQRQFEALRAAGVDLGMGVSSESFKVMNGEGEEVRTYRCVHCRVLFLDHVMYTIHMG
CHGFRDPFECNLCGYRSQDRYEFSSHMTRGEHRY
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagtgatggtctactgggtgtcagcttttattggcacgatacaaagcaatgt
gccaagggctgctgcctcgactccctgagcagaatcggcctctggaataaaagcttgcaa
aatgctccgtttgagcacagagacatagcaatgttaggctggaacgaggaagtgcagtgg
agaggggagggaccgagggcagagttccatagtgctgctgcggcgctacgaacttctgca
catggagcgggggagagttggaagagcttcatattgcaaagtcaaggaattgcagagtac
ttgcagagaatggagaccgaagaggcccaggaaatgtcccagataccaggcagggacagt
ccccttgccaatgaagcctcggaggagatggatgaggctatgcctgttcctgaggacctg
tccgccacctctagcctccagcagaacaacaggactgacaaaagcttggcctgcaatatt
aaagttgaggctcggagtgacgaggagaatggaatggcctgtgaggcgaatggcgaggag
gaggaggaggaggaggaggaaggggcggaggacttgcgtgtgctggacgcctcgggcgcc
aaagtgaacggctcccacgccggggccgacagcaaggtgtcctacccggcggccggcggc
atccgcctccccaacgggaagctcaagtgcgatatctgtgggatagtttgcattggcccc
aatgtgctgatggtgcacaagcgcagccacactggggagcggcccttccagtgcaaccag
tgtggagcctccttcacccagaagggcaacctgctgcgccacatcaagctccactctgga
gagaagcccttcaagtgtcacctgtgcaactacgcctgccgccgtcgagacgccctgaca
ggtcacctgcgcacacactccgttggaaaaccccacaagtgtgcttactgtgggcggagc
tacaaacagcgtagctcgttagaggaacacaaggaacgatgtcacaactacctacaatgc
atggggctccagaacagcatctatacagtagtaaaagaagaaagcaacctgggtgagcag
agggaggacataagcctgacgggacctgagagggccttggtgctagacaggctagctaat
aatgtagccaagcgaaagagctctatgccacagaagtttgtgggtgagaagcgtttgtca
gacctgtcctttgagggcaatggtggggagctgatgcagccacatgtgattgaccaggcc
atcaacagcgccatcagctacctgggggccgagtcccttcggcccctggtgcagacctcc
cccggctcctcctctgatgtggtggtgggctctatctaccagctccacaaggccccggga
gacgtcagcctgtcagccaaagacagcgctgccgagaacctgctcctgctctccaagtcc
aagtcagccagtgagaaagacggctcccccagccccagcggccaggactccaccgacaca
gagagcaacaacgaggaccggcccgctgggggaggccccggggcggccagcgccggcctc
atctacctgaccaatcacatggccccgggaatgcgcaacggcggagccctgcccctggtc
aaggaggagcatcagcggcagtttgaggcgctgcgcgcggccggggtggacctaggcatg
ggggtgagctcggagagcttcaaggtgatgaacggggagggcgaggaggtgcggacgtac
cgctgcgtccactgccgcgtgctcttcctggaccacgtcatgtacaccatccacatgggc
tgccacggcttcagggaccccttcgagtgcaacttgtgcggctaccgcagccaggaccgc
tacgagttctcctctcacatgacgcgcggagagcaccgatactga
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