Clupea harengus (Atlantic herring): 105909749
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Entry
105909749 CDS
T09045
Symbol
zgc:114130
Name
(RefSeq) mRNA decay activator protein ZFP36L1 isoform X1
KO
K18753
butyrate response factor
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
105909749 (zgc:114130)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105909749 (zgc:114130)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105909749 (zgc:114130)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_UNK
zf-CCCH_DUS3L
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
Torus
zf-CCCH_UNK-like_4th
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
105909749
NCBI-ProteinID:
XP_012693861
Ensembl:
ENSCHAG00000021762
UniProt:
A0A6P3WAY3
LinkDB
All DBs
Position
9:24772613..24776632
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AA seq
442 aa
AA seq
DB search
MPSYASNQFIDLDEVLCKQLLNLDLRESPKMSALPVSPVGHKNTRPPCSFSSSCLSDSTV
NAARTSGHWVQPSDMPLPSNWNKMSFWAERSVSMVEGSTGSLGWASTESSSCKLPSASSC
TSLPASASACTSPPSTPTASASTSPASTRYKTELCRTYAERGMCKYGSKCQFAHGLDELR
DLNRHPKYKTEPCRTFHSVGFCPYGIRCHFVHNNEDDLAHNGSKPVLSSSCSISAGRVLS
QRPPLLKHSFSFAGFPSNPPPSMDTTLPHTFLRAPSVSPPATTDLSELLSLAFPDVDMAS
ASLMAAAAAVTAAALEAGRDPQSQFLPSPDSGCSSCSLASSTLPSPPHSLLEPAECCLQR
SPTGGPGAVLVATSTAMGVRSLSHTSLSDHEGGCGSSASSLSGSDSCASGFDGVGRRLPI
FSQLSVPDDGFCSEGSGTGFFL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgtacgcctcaaaccagttcatagatttggatgaagttctgtgcaagcagctt
ctcaatcttgacctccgggaatctccaaagatgtctgcattgccagtctcaccagtcggc
cacaaaaataccaggcccccttgttccttctcttcatcgtgcttgagcgactccacagtg
aacgcagccagaacctctggccattgggttcagcccagcgacatgcctctcccctcaaac
tggaacaagatgtcgttttgggctgagcgttcagtcagcatggtggagggcagcactggc
agcctgggatgggcctccacagagtccagcagctgcaagctgccctctgccagctcctgc
acctccctgccagcctctgccagcgcctgtacctcaccgccatccacgccaacagcatcc
gccagcacatcccccgcttcaacccgctacaagacagagctgtgccgcacgtacgcagaa
cgcggcatgtgcaagtacggcagcaagtgccagttcgcccacggtctagatgaactgcgt
gacctcaacagacaccccaagtacaagacggagccgtgtcgcaccttccactcagtgggc
ttttgcccctacggcatccgctgccactttgtgcacaacaatgaggatgacctcgcgcac
aacgggtcgaagccagtactatcctcctcttgctccatctcagcaggccgtgtcctatcc
cagcgtccccctctcctcaaacatagcttcagctttgccggcttcccctccaacccgcca
ccctcaatggacactaccctgccccacaccttcctgcgcgctccctctgtctcgccgccg
gccacgaccgacctctccgaactgctctcgctcgccttccccgatgtagacatggcctct
gcctcgctgatggccgcagctgctgctgtaacagccgctgctctggaggccggccgcgat
ccccagtctcagttcctgccctcgcccgactcgggctgctccagctgcagcctggcctct
tccacgctcccctcccccccacacagccttctggagccagctgagtgctgcctgcagcgg
agccccaccggaggccccggggccgtgttggtcgccacctccactgccatgggtgtccgg
tccctctcccacacgtccctctccgaccacgagggcgggtgtggcagctccgccagcagt
ctcagcggctcagattcctgcgcctcagggttcgacggtgtcgggaggcggctgcccatc
ttcagccagctctccgtgccagatgatggcttctgcagtgagggcagcggcacaggcttc
tttctgtag
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