Clupea harengus (Atlantic herring): 105909755
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Entry
105909755 CDS
T09045
Symbol
abcg1
Name
(RefSeq) ATP-binding cassette sub-family G member 1
KO
K05679
ATP-binding cassette, subfamily G (WHITE), member 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105909755 (abcg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105909755 (abcg1)
Transporters [BR:
char02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG1, 4 subgroups
105909755 (abcg1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
AAA_21
SMC_N
RsgA_GTPase
AAA_13
AAA_29
ABC2_membrane_3
AAA_22
AAA_23
MMR_HSR1
AAA_28
AAA_16
nSTAND1
nSTAND3
Rad17
AAA_30
Cytidylate_kin
AAA_18
AAA_10
DUF1440
Motif
Other DBs
NCBI-GeneID:
105909755
NCBI-ProteinID:
XP_012693870
Ensembl:
ENSCHAG00000020239
UniProt:
A0A6P3WAY9
LinkDB
All DBs
Position
9:22262666..22286761
Genome browser
AA seq
671 aa
AA seq
DB search
MACLMAAFSVNNTSVTNSIIMNTNGPPDLMLDPRTVCVSIDDVVSNHVGGQQTPLLHGHL
KKVENNLTEAQRFSYLPRRPAVNIEFKDVSYSVPEGPWWRKKGYKTLLKGISGNFTSGNL
VAIMGPSGAGKSTLMNILAGYRETGMKGEILINGQPRDLRSFRKVSCYIMQDDMLLPHLT
VQEAMMVSANLKLQEKDEGRRDMVREILTALGLLECAKTRTSNLSGGQRKRLAIALELVN
NPPVMFFDEPTSGLDSSSCFQVLSLMKALAQGGRTVICTIHQPSAKLFELFDKLYVLSQG
QCIYRGKVSSLVPYLRELGLNCPTYHNPADFVMEVASGEYGDQTARLVKAVQEKKCEKDY
NTEINGPLNPFLWHRSSDEDSSSSEGCHSFSASCMTQFCILFKRTFISIMRDSVLTHLRI
ISHVGIGILIGLLYLGIGNEAKKVLSNSGFLFFSMLFLMFAALMPTVLTFPLEMGVFLRE
HLNYWYSLKAYFLAKTMADVPFQVVFPVAYCSIVYWMTSQPPDAVRFILFLSLGTLTSLV
AQSLGLLIGAASTSLQVATFVGPVTAIPVLLFSGFFVSFDTIPKYLQWMSYISYVRYGFE
GVILSIYGLDREDLHCDEGETCHFQKSAAILKELDVEDARLYLDFIVLGIFFVTLRLTAY
FVLRYKINSER
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtcttatggcagccttctcagtgaacaatacttcggtgactaattccatcata
atgaacaccaacgggccccctgatttaatgctggaccctaggactgtgtgtgtatccatt
gatgatgtggtgtcaaaccatgtgggaggtcagcaaacgccgctgttacacggacacctc
aaaaaagtggagaacaacctcacagaagcacagaggttctcctacctgccacgcagaccg
gcggtcaacatcgagttcaaagacgtctcctactcagttcctgagggaccgtggtggaga
aagaaaggttacaagacactcctgaaaggcatctctgggaacttcaccagtgggaacctg
gtggccatcatgggcccctcaggagccgggaagtctaccctgatgaatatcctggcggga
tacagggaaacgggaatgaagggagagattctgatcaacgggcagcctcgcgacctgcgt
tccttccggaaggtctcctgctacatcatgcaggatgacatgcttctccctcatctaact
gtacaggaggccatgatggtgtctgctaatcttaaactccaggaaaaagatgaggggagg
agagacatggtgagggagatccttactgccctcggccttcttgagtgtgccaaaacacgc
acatccaacctatcaggtggacagagaaagcgcttagccatcgccctagagctcgtcaac
aacccgcctgtcatgttcttcgatgagcccaccagcggtctggacagctcctcgtgtttc
caagtgctctcactgatgaaggctctggcccagggaggacgcactgttatctgcaccatt
caccagcccagtgccaagctgttcgagctcttcgacaagctgtatgttctgagccagggc
cagtgcatctacaggggaaaggtgtccagcctcgtcccctaccttagggaactgggcctc
aactgcccaacataccataacccagcggacttcgtgatggaggtggcctctggcgagtat
ggagaccagactgccagactggtgaaggccgttcaggagaagaagtgtgagaaggactac
aacacagagataaacggacctctcaaccctttcctgtggcacaggtcttcagacgaggac
tcgtcctcttccgagggctgtcacagtttctccgccagctgcatgacgcagttctgcatc
ctcttcaagagaacattcatcagcatcatgcgggattcggtgctgacgcacttgagaatc
atatctcacgttggcattggcatcctgattgggctcctctacctggggatcggcaacgag
gccaagaaggtcctcagcaactcggggtttctcttcttctccatgctcttcctcatgttc
gctgccctcatgcccacagtgctgacctttcctttggagatgggagtatttctaagggaa
catctgaactattggtacagcttaaaagcgtactttttggcgaagaccatggcagacgtt
ccttttcaggttgtattcccggtggcatactgctccatcgtgtactggatgacctctcag
cccccagacgccgtccgcttcatcctcttcctgtctctggggacgctgacctctctggtg
gcccagtctctgggcctcctcataggtgccgcgtccacatctttacaagtggctacgttt
gttgggcctgttacagcgattccagtgttgctgttttctggtttctttgtcagttttgac
acgatacccaaatacctccagtggatgtcatacatttcctatgtcaggtatggttttgag
ggggtcatcttgtccatctatggcctggatcgagaggacctccactgcgacgagggcgag
acgtgtcactttcagaaatcagcggccattttaaaggagctggatgtagaggacgccaga
ctctacctggacttcatcgtgctgggcatcttcttcgtgaccctccgcctcaccgcctac
ttcgtcctgcgctacaagatcaactccgagagatag
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