KEGG   Clupea harengus (Atlantic herring): 105909856
Entry
105909856         CDS       T09045                                 
Symbol
rab43
Name
(RefSeq) ras-related protein Rab-43
  KO
K07930  Ras-related protein Rab-43
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105909856 (rab43)
   04031 GTP-binding proteins [BR:char04031]
    105909856 (rab43)
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   105909856 (rab43)
GTP-binding proteins [BR:char04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab19/30/43 [OT]
    105909856 (rab43)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase PduV-EutP Gtr1_RagA FeoB_N AAA_22 Septin AAA_5 TsaE AAA_7 NTPase_1 AAA_16
Other DBs
NCBI-GeneID: 105909856
NCBI-ProteinID: XP_012693977
Ensembl: ENSCHAG00000022422
UniProt: A0A6P3WB05
LinkDB
Position
5:8186310..8191711
AA seq 208 aa
MSLLDSDDSYDFVFKIVLVGDVGVGKTCVVQRFKTGIFIERQGNTIGVDFTMKTVDIQGK
RVKLQIWDTAGQERFRTITQSYYRSTNGAIITYDITKRASFLSVPKWMEDVKKYGGSNIV
PLLVGNKSDLSDMREVQLAEAQSMAHQLDFITAIETSAKDSTNVEEAFNKMAAELILRHG
GPMFNENVTDSFKLNSKDVTTEGWGCSC
NT seq 627 nt   +upstreamnt  +downstreamnt
atgtcattgcttgattctgatgacagctatgacttcgtcttcaaaatagttttagtcgga
gacgtcggtgtcggcaaaacttgtgtagtgcaacgattcaagactggtatcttcatcgaa
agacagggcaacacaattggagtggactttaccatgaagactgtggacattcaaggaaaa
agagtcaagttgcagatctgggacacagcagggcaggagcgcttccgcaccatcacgcag
agctactaccgcagcaccaacggcgccatcatcacctacgacatcaccaagagggcctcc
ttcctgtccgtgcccaagtggatggaggacgtgaagaaatacggcggctccaacatcgtc
ccacttttagtcggtaacaaatccgacctaagcgacatgcgtgaagtccaactcgcagag
gcccagtctatggctcaccagttggactttatcactgccattgagacgtcagccaaggat
tctactaacgtggaagaggccttcaacaagatggccgccgaactcattctcagacatggg
ggccccatgttcaatgagaacgtgactgacagcttcaagttgaacagcaaggatgtgact
acagaaggctggggctgcagctgttga

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