Clupea harengus (Atlantic herring): 105909886
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Entry
105909886 CDS
T09045
Name
(RefSeq) bactericidal permeability-increasing protein-like isoform X1
KO
K25374
bactericidal permeability-increasing protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99994 Others
105909886
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Gene cluster
GFIT
Motif
Pfam:
LBP_BPI_CETP_C
LBP_BPI_CETP
Motif
Other DBs
NCBI-GeneID:
105909886
NCBI-ProteinID:
XP_012694006
Ensembl:
ENSCHAG00000004626
UniProt:
A0A6P3WAT3
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Position
5:complement(9809370..9823219)
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AA seq
479 aa
AA seq
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MVTSGRMSPWCLLTLLTLVPLTLSSNAGVKVKLTQKGLEYARQIGMTTLQQKLKTIKVPD
LSGTEKVAPIGKVKYTLSGMQITSLGLPKSQMGMVPGTGVSLAIGNAFLSLHGNWKVRYL
HFIKDSGSFDLAVKDLTINTNIALKSDETGRPAVNTVSCTSNVGSASIKFHGGASWLYNL
FSAYIDKALRSALQKQICPLVSDAISELNPHLKTLNVLAPVDKYAEIEYSMVASPVVSKA
FVDFGLKGEFYNIGRHKEPPFSPPVFGLPPQVNNMLYIGVSSFTANSASFVYNNAGAFNL
FITDDMIPPSSPIRLNTRTFGAFIPQLAKEYPGLMMKLLVKTTRQPIISFQVNNVTLQAS
GTVTAYAIQPNTTLAPLFILNMETSVSAHIYVTGVKLAGSVILNRMSMSLGASYVGPFQV
KSLDNIFLMVLKVAVLPKINAHLQKGYPLPAIGKMSLVNTQLQVLKDYMLIGTDVSFRG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggtgacttcgggcaggatgtccccctggtgtctgttgaccctgctgaccctggtgccc
ctcaccctgagctcaaatgcaggggtcaaggtcaaacttacgcagaaggggctggagtac
gctcggcaaattgggatgacaacactgcagcagaagttaaagaccatcaaggtccctgac
ctgagcgggacagagaaggtggctcccattggcaaggtcaaatacaccctgtcaggaatg
cagatcacaagcctgggactgcccaagtctcagatgggcatggttccaggcacgggggtc
agtctagcgattgggaacgccttccttagcctccatggcaactggaaggtccgatattta
catttcataaaggacagtgggtccttcgacctggcagtgaaggacctcaccatcaacacc
aacattgccctgaagagcgacgagaccggccgccctgcagtcaacaccgtcagctgtacc
tccaacgttggcagtgccagcatcaagttccacggcggagccagctggttgtataacctc
ttcagtgcctacatcgacaaggccttgcgcagcgccctccagaagcagatctgccccctg
gtgtccgatgccatatcagaactgaatccccacctgaagactttaaatgttctggcacct
gtggacaagtatgctgagattgagtattcaatggttgcatctcctgtcgtctccaaagcc
tttgtggacttcggcctaaagggcgagttttacaacatcggcaggcacaaggagcctccg
ttctccccgccagtcttcggtctgcctccgcaggtcaacaacatgctctacatcggtgtc
tcatctttcaccgccaactctgcatccttcgtctacaacaatgcaggagccttcaacctc
ttcatcacagatgacatgataccccccagttcccccatcaggctcaacaccaggacattt
ggggcgttcatcccacagctagcgaaggagtaccccggcctgatgatgaagctgttggtg
aagaccaccaggcagcccatcatctccttccaggtcaacaacgtcacgctgcaggcctct
ggcacagtgacagcctacgccatccagcccaacaccaccctcgccccactctttatcctc
aacatggagaccagtgtcagtgctcacatctacgtgaccggggtgaaactagccggctca
gtcatcctcaacagaatgtctatgtctctgggggccagctatgtgggaccttttcaggtg
aaatctctcgataacattttcctgatggttttgaaggttgccgtgctccccaaaatcaat
gctcatctgcagaaaggctaccctctccctgccattggaaagatgagccttgtgaacact
cagctgcaggtcttgaaggactacatgctgattggaacagatgtttcgttcagaggatga
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