Clupea harengus (Atlantic herring): 105909887
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Entry
105909887 CDS
T09045
Symbol
phf2
Name
(RefSeq) lysine-specific demethylase phf2 isoform X1
KO
K19414
lysine-specific demethylase PHF2 [EC:1.14.11.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105909887 (phf2)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
105909887 (phf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JHD
JmjC
PHD
Cupin_8
PHD_5
TEX13B-like_middle
JmjC_2
PHD_ash2p_like
RH_dom
Motif
Other DBs
NCBI-GeneID:
105909887
NCBI-ProteinID:
XP_012694007
Ensembl:
ENSCHAG00000026882
UniProt:
A0A6P3WAV5
LinkDB
All DBs
Position
5:complement(9497785..9528791)
Genome browser
AA seq
1086 aa
AA seq
DB search
MATVPVYCICRLPYDVTQFMIECDACKDWFHGSCVGVDEDEAPDIDIYHCPNCEKTNGKS
TLKKKKNWNKHDTGQSTDVRPVQNGSAVFIKELRSRTFPSAEDVVVKLTGSQLTMDHLEE
GGFNEPIMVLKKDGLGISMPAPTFYVSDVENYVGPDVPVDVIDVPKQTDGKMKLKEFVDY
YYSTNRKKVLNVINLEFSDTRMDSIVESPAIVRKLSWVENYWPDDALLGKPKVTKYCLIC
VKDSYTDFHIENGGASVWYHVLKGEKIFFLIKPTSANLSLYERWRSSSNHSEMFFADQVD
KCYKCTLKQGQTLFIPSGWINAILTPVDCLAFSGHFVHNLSVEMQMRAYEVEKRLKVASL
TPFSNYETACWYVGRHFLERFKGLHKTNKQPAPYLVHGAKIINGAFRSWTKKQALLEHED
ELPENMKPTQLIKDLAKEIRICENATKAIKSEPSSTKLPAEEPPSAPPEPEDPVSPADVA
TPARDKPARKKATRPPKPPKMPKAPKPPKVPKVKEAAKKKGKKAKDGGPPPKPSSLAALE
SHAKDILSKMDQPKKGKAAKSVMSPVEREPNKQNDVEKFEMREHKNKTEAKWKYKNSKPD
SLLKMEEEHKFEKSTLGHKDSKFSFSMSNKRLLGSKTLKPQTNSSVFGSLQNLKEDKNKP
VRDEYEYVSDEGELKIDEFPIRRKKNAVKRDLSFLSNIKEPIQPSKKPKLQPSALKNGDS
SDEESLHIDTEAKPEVKGRNSKVKKKGGNAAGILDLLQASKQVGGIDYNTNSQPPASPST
QEAIQGMLSMANLPSSVSCLTPSWSNSQSKGNSQASKKTSASGGGGGGNNSKKPGKRPPK
KTRKSSSVDSPDMFDDDQDHLEACFKDSDYVYPSLESEEDNPIFKSRSKKRKNSDDTPYS
PTARVGPSVPRQERPAREGARVASIETGLAAAAAKLSHQEEQQKNKKKKKTNSRKKAPAP
LPVVEEPLKHSQDSSSPEPALDLQEGLVADHEYSTGTGAGKAVPGGPQPMAPGVFLSQRR
PSTSSSSQNNNNSSAAAPAAGAKGERAAAGAGAADAKAKRLKKGMATAKQRLGKILKIHR
NGKLLL
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtaccagtatattgcatctgcagattaccttacgacgtaacccagtttatg
atcgaatgtgatgcttgtaaggattggttccacggcagctgtgttggggtggatgaggat
gaagctcccgatattgatatctaccactgtccgaactgtgagaagaccaacggcaagtct
acgttgaaaaagaaaaagaactggaacaagcacgacacagggcaaagcactgacgtccga
cctgttcagaatggcagtgctgtgtttattaaggagttacgtagtcgcaccttccccagc
gctgaggatgtggtggtcaaacttacgggcagtcagttgaccatggaccacctggaggag
ggtggcttcaacgagcccatcatggtactaaagaaagatggcctggggatatccatgcct
gcccccacattctacgtcagtgatgttgaaaactatgtcggcccagatgtccctgtggat
gtgatcgatgtccccaaacagaccgacggcaaaatgaagcttaaggagtttgttgattac
tactatagcacaaaccggaagaaagtactgaatgttattaacctggaattttcagacaca
aggatggatagcattgtggagagcccggcgatcgttcgaaagctgtcctgggtggagaac
tactggccagacgacgctctgcttgggaagcccaaagtcaccaaatactgcctgatctgc
gtgaaggacagctacacagacttccacatcgagaacggaggggcctccgtctggtaccac
gtgctaaagggagagaagatcttcttcctgatcaagcccacctcggccaacctctccctt
tacgagcgttggcggtcctcatccaatcacagcgagatgttcttcgccgaccaggtggac
aagtgctacaagtgcacgctcaagcagggtcaaactctcttcattccgtcaggatggatc
aatgcaatactgactcctgtggactgcctggccttctccgggcactttgtccacaacctg
agcgtagagatgcagatgagggcgtatgaggtggagaagaggctgaaagtagccagcctt
actcccttctcaaactacgagacggcctgttggtacgtgggacgacacttcttggagcga
ttcaaaggtttacacaagacaaataagcagccagctccctacttggtacacggtgccaaa
atcatcaatggagccttcaggtcgtggactaaaaaacaggcccttctggaacacgaggat
gaacttccagagaacatgaagccaacacagctcattaaagaccttgccaaagagattcgg
atttgtgagaatgcaactaaagccataaagtcagaacccagcagcaccaagcttccagcc
gaggaaccgccctcagcccctccggagcccgaggaccctgtgtcccccgccgacgtcgcc
acccccgcacgggataaaccagccaggaagaaagccaccaggccccccaagcctcccaag
atgcccaaggcgcccaaaccccccaaggtgcccaaggtgaaggaggcggccaagaagaag
gggaagaaagccaaagatggcggcccccctcccaaaccttccagcctggcagcactcgag
tcccatgccaaggacattctcagtaagatggaccagcccaagaaaggcaaggctgcaaag
agcgtaatgagtccggtggagagagaaccgaacaagcagaacgacgtggagaagttcgaa
atgcgagaacacaagaacaaaacagaggccaagtggaaatacaagaacagcaagccagac
tccttattgaaaatggaagaggagcacaaatttgaaaagtcgacactaggacacaaagac
agcaagttcagcttctcaatgtccaataagagactgctgggctcaaagacgctaaaacca
cagacaaactccagtgtgttcggatcgttacaaaacctgaaggaagataaaaacaagcct
gtgagagacgagtacgagtatgtctcggacgagggcgagctgaagatcgatgagttcccc
atcaggagaaaaaagaatgcggtgaagagggatttgtcatttttatcgaacatcaaagaa
cccattcagccttccaaaaagccaaagctgcagccgtcggctctgaagaatggtgactca
tcagacgaagagtcgcttcacatagacaccgaagccaagccagaggtcaaagggcgtaac
tcaaaggtcaagaagaaaggtggaaatgcggctgggatcctggacctgctgcaggcaagc
aagcaagtgggcggcatcgactacaacacaaacagtcagccacctgcatcccccagcaca
caggaagccattcagggcatgttgtccatggctaacctgccgtcctcagtctcctgtctg
acaccgtcctggagcaacagccagtctaagggtaactcgcaggcctcgaagaagacaagt
gccagcggtggtggcggcggcggcaacaacagcaagaagccaggcaagcggccacccaag
aagactcgcaagagcagcagcgtggacagccccgacatgttcgacgacgaccaagaccac
ctggaagcgtgcttcaaggactccgactacgtctatccttctctggaatctgaggaggac
aaccccatcttcaaatcacgatcgaagaagaggaaaaactctgacgacactccgtacagc
cccacagctcgggtcggcccgtctgttccccgtcaggagaggcctgctcgtgagggggcg
cgggtggcatccatagagacaggcctggcagcagccgctgccaaactttcccatcaggaa
gagcagcagaagaacaagaagaagaagaagaccaacagcaggaagaaggcgccggcgccg
ctcccggtggtggaggagcccctcaaacactctcaggacagcagctcgccggagcccgcc
ctggacttgcaggagggcctcgtggccgaccacgagtacagcacgggcaccggggcgggc
aaggcggtgccgggcggtccgcagcccatggcgccgggcgtcttcctcagccagaggaga
ccctccacctcctcgtcctcgcagaacaacaacaacagcagcgcggcggcgcccgcggcg
ggggccaaaggggaacgagccgcggctggagcgggagcagccgatgccaaggccaagcgg
ctaaagaaaggaatggccaccgccaaacagagactgggaaagatcctaaagatccatcgg
aatgggaaactcctcctgtag
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