Clupea harengus (Atlantic herring): 105909889 Help Entry 105909889         CDS       T09045                                  Symbol pbrm1 Name (RefSeq) protein polybromo-1 isoform X3   KO K11757   protein polybromo-1 Organism char  Clupea harengus (Atlantic herring) Pathway char03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:char00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     105909889 (pbrm1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:char03021]     105909889 (pbrm1)    03036 Chromosome and associated proteins [BR:char03036]     105909889 (pbrm1) Transcription machinery [BR:char03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      105909889 (pbrm1) Chromosome and associated proteins [BR:char03036]  Eukaryotic type   Chromatin remodeling factors    PBAF complex     105909889 (pbrm1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1 Motif Other DBs NCBI-GeneID:  105909889 NCBI-ProteinID:  XP_031423438 Ensembl:  ENSCHAG00000023670 UniProt:  A0A6P8FIK7 LinkDB All DBs Position 5:8427934..8445543 Genome browser AA seq 1691 aa AA seqDB search MGSKRRRATSPSSSVSGGDFDDGQTTSMPSTSRKRRRTSNIPTVDPIAVCHELYNTIRDY KDDQGRMLCELFIRAPKRRNQPDYYDVVSQPIDMMKIQQKLKMEEYDDVEQLTNDFQLLF NNAKAYYKPDTPEYRAACKLWDLYTRTKNEFVQRGDYDEEDEDGDDPQELPGVSNEEESA PTCLKDVLEQLLDAVVSYTEPSGRLVSELFQRLPSKVQYPDYYEIIKDPIDLKTIAQRIQ MGFYRSPHAMSKDIDLLVKNAKTYNEPGSQVFKDANTLKKVFAQRRAELEHAEPVKSSIR IRNRRSAQGDRLSAITMALQYGSEGEEDAILAGSVHYDEGESEAESIHFSMDVSNPIFQL YEAVRGARNNQGQLLAEPFFQLPSRKDYPDYYQQIVQPISFQQIRIKMKNNEYESIEHTE ADLMMMFENAKRYNVPHSHIYKRALKLQHILQLKRKELLRSGDEDRDSMLSSTMSDGSTA KRKSHKKNTKKNRMKVLFATLTEAREMNTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLR TIDHNIRADKYMSEESMMEDMRLMFRNARHYNEEGSQHGPIGHRPRGPKNPNQVYNDANV LEKILKEKRRDLGPMPDEDDIASPKLKIRKSGISPKKSKYLTPLQQKLNELYEAVKNYTD KRGRRLSTIFLRLPSRSELPDYYVAIKKPVDMEKVKSHMLANKYQDVDALVEDLVLMFNN ACTYNEPESLIYKDALVLHRVLLETRRDLEGGEDAHVPNVARLIQDLIRSLFVSVLGHQD DEGRCYSDSLAEIPAADPANANRPPLNFEIIRANVDKASYKRLDVFQDHMFEVLEKARRL HRTDSEIFEDAVELQQFFIRIRDELCKNGEILMTPALSYTSKHLHSDVEKEKKSKLPKEM EEDKLKREEEKKEAEKSEDSAGGAWQGVQRTYSQDCSFKDNMYHVGDYVYVEPAEQNLQP HIVCIERLWQDDAGEKWLYGCWFYRPSETFHLATRKFLEKEVFKSDYYNKVPVSKILGKC VVMFVKEYFKLHPEGFRAEDVFVCESRYSAKTKSFKKIKMWTMPLSSVKFVPRDVPLPVV RVASMFAPKNDEKPPDTAEDCNDCKTGPSIIDKSVERTGHGLVVLACKWNPAVPAPMGMS FLMEREDVTMDMANGETGCQYFEQLCYNDSWMKVGDCVYIRSHGLVRHRVGRIERMWVRD GAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEESCPMTCITGKCAVSSFKDYLSCRP TEVPEEDVLLCESRYIESEKQMKKFKGLKRFSLSAKVVEDEIYYFRKLIVPQKEPSPLLD KKIEELEAKFADMTDEELEDLGDDDGDTSDAQSMPQHQTPLASDMDMMPYTPPQSTPKSI KGMSKKEGSKRKINMSGYILFSSEMRAVIKARHPDFSFGELSRLVGTEWRNLEAKKKAEY EERAAKVAEQQERERAAQQQNSPRAGTPVGAHMGVVAPPTPLGMLNPSMTPASGMMGTYG PPMMPHQGPDGMVSIPGMPSHLMGIPVLPHHLPHGMPGFPGMPYLGLNGMNGNPGAGNHY GTQMGHAGQGHHAPPPYPGQGQGGQPAIQQPTTPIFVAPPPKPQRILHSEAYLKYIEGLN AESSTVSKWDQTLSARRKDIRLTKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTL NIRQTYNLQNI NT seq 5076 nt NT seq  +upstreamnt  +downstreamnt atgggctccaaacgaaggagagccacttctccttcaagcagcgtgagtggcggggacttc gatgatggtcaaaccacatcaatgccttcaaccagtcgcaagagaagacgaacatcaaat atccccactgttgatcctattgcagtgtgccatgaactctacaacactattagggattac aaagatgaccagggcagaatgctttgtgaactgtttattcgcgcaccaaaaagaaggaac cagcccgattactatgatgtggtgtcccaaccaattgacatgatgaaaatccagcagaag ctgaaaatggaagagtatgacgatgtggagcagctcactaacgactttcagctcttattc aataatgccaaggcttattacaagcctgacaccccagagtacagggcagcctgcaaactg tgggacctgtatacccgcaccaagaatgagtttgtgcagaggggagactacgatgaggaa gatgaggatggcgacgatcctcaagaactcccaggagtctccaatgaggaagagtctgca cccacctgtctgaaggatgtccttgagcagcttctcgatgctgtggtgtcttacacagaa ccctctggaagactggtcagtgagctcttccagaggttgccttcaaaagtgcaataccca gattactatgagattattaaggatccaattgatctgaagaccattgctcaaaggatacag atgggcttctacagaagtcctcatgctatgtcaaaggacatagatctcttggtaaaaaat gccaagacatataatgaacctggatcacaggttttcaaggatgccaacactctcaagaag gtttttgcccaaagaagggcagaacttgagcatgctgagcccgttaagtccagtatacga ataaggaacagacgatcagctcaaggagaccgtctctcagccataaccatggcactgcag tatggctcggagggtgaggaggacgccatcctcgctggatcagtccactatgacgagggt gagtcggaggctgagagcatacacttcagcatggacgtaagcaaccccatcttccagcta tacgaggcggtgcgtggggccaggaacaaccagggccagctcctcgccgagcccttcttt cagctgccgtccaggaaggactaccccgattactaccagcagattgtccagcccatctcc ttccagcagattcgaatcaaaatgaaaaacaacgaatatgagagcattgagcacacagag gctgatctcatgatgatgtttgagaatgccaagcgttacaacgtcccccactctcacatc tacaagagagccctgaagctgcaacacatcctgcagctgaaaagaaaggagcttttgaga agtggggacgaggacagggacagcatgctctcttccaccatgtccgatggcagcaccgcc aagaggaagagccacaagaagaacactaagaagaaccgcatgaaggtgctgttcgctacg ctgacagaggcgcgagagatgaacaccggccgcagactttgtgacctgttcatggtcaag ccctccaagaaggactacccggactactacaagatcatcctggagcctatggaccttcgc accattgaccacaacatccgcgcagacaagtacatgagcgaggagtccatgatggaggac atgcggctcatgttccgcaacgccagacactacaatgaggagggatcccagcatgggcct attggacacaggcccaggggccctaaaaacccaaaccaagtctataatgatgccaacgtc ctggaaaagatcctgaaagagaagcggagagacctggggccaatgcctgacgaggatgac atcgcttccccaaaactaaaaataaggaagagtggcatctccccgaagaaatccaagtac ctgaccccgctgcagcagaagctgaacgagctctacgaagcggtgaagaactacacggac aagcgcggccgccgtctcagcaccatcttcctgcgcctgccgtcgcgttccgagctgccc gactactacgtggccatcaagaagcctgtggacatggagaaggtcaagagtcacatgctg gccaacaagtaccaggacgtggacgcgctggtggaggacctggtgctcatgttcaacaac gcctgcacgtacaacgagcccgagtcgctcatctacaaggacgccctggtcctgcacagg gtgctcctggagacgcggcgggacctggaggggggcgaagacgcccacgtgcccaacgtg gcccgcctcatccaggacctcatccgcagcctgttcgtgtccgtgctcggtcaccaggac gacgagggccgttgctacagcgactcgctggcggagatccccgccgctgatcctgccaac gcgaacaggcccccgctgaactttgagatcatcagggcgaatgtggacaaagcgagctac aagaggctggacgtgttccaggatcacatgtttgaggttctggagaaggcccgacgcttg cacaggacagattctgaaatctttgaggatgcagtggagctacagcagttcttcatccgc atccgagacgagctgtgcaagaacggagagatcctgatgacacccgctctcagctacacc tccaaacacctccacagtgacgtggagaaggagaagaagtcgaagctccccaaggagatg gaggaggacaagctcaagcgagaggaagagaaaaaagaggctgagaagagcgaggactca gccggaggagcctggcagggcgtgcagcgcacctacagtcaggactgcagcttcaaggac aacatgtaccacgtgggagactacgtctacgtggaaccggccgagcagaacctgcagcct cacatcgtctgtatcgaacgcctgtggcaggacgacgccggtgagaaatggctgtatggc tgctggttttacagacctagtgaaacctttcatctcgctacacggaagtttctggagaag gaggtctttaagagtgactattacaacaaagtgcctgtcagcaaaatactggggaaatgt gtggtcatgtttgtcaaggaatacttcaaactgcatccagaaggcttcagggcagaagat gtctttgtctgcgagtctcgttactcagcaaagaccaagtccttcaagaagatcaaaatg tggaccatgcctctgagctctgtgaagtttgtccctcgtgatgtgccattgccagtggtc cgcgttgcctcaatgtttgcccctaagaatgatgagaagccccccgacacagctgaagat tgtaatgattgtaaaacagggccatccatcatagacaagagtgtagagaggaccggtcat ggtcttgttgtattggcatgcaagtggaatcctgcagtgcctgcaccaatgggaatgtct ttcttgatggagagagaggatgtgactatggacatggccaacggtgagaccggctgtcag tactttgagcaactctgctacaatgactcgtggatgaaagtgggagactgtgtctacatc cgctctcatggactagtgcgccaccgagtgggcaggattgagcggatgtgggttcgagat ggagcggcctacttcttcgggccgatcttcatccacccagaggagaccgagcatgagcca actaagatgttctacaagaaggaggtgttccttagcaacctggaggagtcctgcccaatg acgtgcatcactggaaagtgcgctgtgtcctcgtttaaggactacttgtcgtgccgccct accgaagtgcccgaggaggatgttctgctctgcgagagccgctacatcgagagcgagaaa cagatgaagaagtttaaaggcctcaaacgcttctccttatctgccaaagtcgttgaggat gagatttactactttaggaaactgatagtgcctcagaaagagccgtctccccttctggac aagaagattgaggagctggaggccaagtttgctgacatgacggacgaggagctggaggat ctgggggatgacgacggagacacgtctgatgcccagtccatgccccagcatcagacaccg ctggccagcgacatggacatgatgccatacacgccacctcagtcgactcctaagtccata aagggcatgtctaagaaagagggctcgaagaggaagatcaacatgagcggctacatcctg ttcagcagtgagatgcgagccgtcatcaaggcccggcaccccgatttctccttcggtgag ctgagtcggctagtggggaccgagtggaggaacctggaggccaaaaaaaaggcagagtat gaagagcgggcagctaaggtggctgagcagcaggagcgtgagcgggcggcccagcagcag aactccccgagagcaggtaccccagttggggcgcatatgggggtggtggcgccccccacc cccttggggatgcttaaccccagcatgacccctgcgtcaggcatgatgggtacctacggg ccacctatgatgccccatcagggcccagacggaatggttagtatacctggcatgccatca catcttatgggtattcccgtcttaccccatcaccttcctcacggtatgcctggcttccct ggcatgccttacctgggtctgaatggcatgaacggaaaccctggtgctggaaatcattat ggaactcagatggggcatgctggtcaagggcatcacgctccgcccccttacccaggacag ggccagggagggcagcctgcgatacagcagccgaccacacccatatttgtggccccgcct cccaaaccacagcgaatcctgcactctgaggcatatttgaaatacatagagggactcaat gcagagtcgagtacggttagcaagtgggaccaaactctctcagctcgtagaaaagacata cgtctgaccaaagagcaggagagccggctgccatcccattggctgaaaagtaagggcgcc cacaccactatggctgacgccctatggagactgcgagaccttatgctccgggacacgctc aacatccgtcagacatacaacctgcagaacatctaa

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