Clupea harengus (Atlantic herring): 105909898
Help
Entry
105909898 CDS
T09045
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105909898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105909898
03036 Chromosome and associated proteins [BR:
char03036
]
105909898
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105909898
Coactivators
SAGA/TFTC/STAGA complex
105909898
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105909898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
105909898
NCBI-ProteinID:
XP_031423455
UniProt:
A0A6P8FIS1
LinkDB
All DBs
Position
5:8532812..8552785
Genome browser
AA seq
798 aa
AA seq
DB search
MMSQSPTVATRITGLPSVAGSETAVGHPNQGRVETVATAPGTSVFQTLNGDYVNCQTKVS
GVALAGTPLSGGPNVNITSNPVVSNGLGMADGNTNVNVIPSSPNIVIRTATNSQNTVLSP
SLGSGATSVTIRPPVQMGTSGAISNVTTTTQIVTASQGTLQNPLLQTVTRTVSPTAVAAA
VPSNMNQSGVRAIAPQVFAPRLPQPGPNPPANVQNIQLPPGMVLVRNQSGQLLMMHQQTL
AQMQAQAKSQSAMAPRPSTPTISTPIKAPGTPIVARHMAPLTVTKQGSPTPVSAPATTTL
QRPPILQHPVAGAAGATVTPSLGAAVQQTTPQRTPVATPNRAVVAQETMENVKKCKNFLS
TLIKLACSGKQSTETAANVKDLVRKLLEGKIEPEDFTGRLYRELNSSPQPYLVPFLKRSL
PALRQLTPDSAAFIQQSQGLTPSPATVTPAIAGPFPVTATATAAALGATANLTAPRPRLQ
PTTLVLRAPQPGAIRKPPHVTMATTPMVTLRTQPQNRVFVGAPSKMITAVASKGRPGDSA
GGSFKDDDDINDVASMAGVNLSEESARILAINSDLAGTVMRSCKDEAFLHTPMLTRRIAE
IGKKYGIAELGPELVTFVSHATQQRLSSLLEKASVVAQHKNANFKEGNHYEQASDVRLQL
KFFEQLDQMEKQRKEEQEREILMKAAKSRARQEDPEQLRLKQKAKEMQQQELAEIRQREA
NLTALAAIGPRKRKKMDSPGSSGAAEASCSSSASSGSGASRQFTRQRITRINLRDLLYCL
ENEHSSSHSQLLYRGLLK
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcccagagtccgactgtggcaacaagaataacaggactcccgtcagtcgcagga
tctgagaccgcagtgggtcatcccaatcaaggcagggtcgagactgttgccaccgcacct
ggaacgtctgtatttcaaactttgaatggagactacgtgaactgtcagactaaggtgagc
ggtgtcgctctggctgggacgccgctgtcaggtggccccaacgtgaacattacaagcaac
cctgtagttagcaacggattaggaatggctgacggaaacacaaacgtcaacgttattccc
tccagcccaaacattgtcattcgtacagccacaaactcacagaacacggttttatcaccc
agtttgggtagcggggctacttcggtaactataaggccgcccgtgcaaatggggacttct
ggcgctatttcaaacgtgacaacgaccacccagattgtcacagcttcacaaggaacttta
caaaatccgcttttacaaaccgtaacgaggacggtctccccgacagcagtagcagctgct
gtcccttcaaacatgaatcagagcggagtccgggctatagcgccacaagtgttcgctccc
cggctgcctcagcccgggccaaatccgcctgctaatgtccagaacatccaacttccacca
ggcatggtccttgttcgcaatcagagcgggcagcttctgatgatgcaccagcagactttg
gctcagatgcaggcccaggccaagtcacagagcgcaatggcccctcggcccagcacgccc
actatctccacgccaatcaaggctcctgggacccctattgtagcccgacacatggcgccg
ctaaccgtgaccaagcagggctcccccactcccgtttctgccccagctaccactaccctt
cagagaccccctatcttacagcatccagtcgcaggggctgctggggcgacggtgactccc
tccttaggggcggcggtgcagcagacgacacctcagaggacacctgtagcgacacccaac
agagccgttgttgcccaggagaccatggagaatgtgaagaaatgtaaaaactttctgtcg
acgttgatcaagctggcgtgtagtggaaagcagtccacagagacagcggccaacgtgaag
gacctggtgcggaagcttctggaagggaagattgaacctgaagacttcactggccggttg
taccgggagctgaactcctcaccccaaccgtatcttgtgccttttctcaagagaagtctt
ccagccctgcgccagctcacgccagactctgcagccttcatccagcagagccagggcctg
acgcccagccctgctacggtcaccccagccatcgccggccccttccccgtcaccgccacc
gctaccgccgctgctctgggcgccactgccaacctcactgccccacgcccacgcctccag
ccaaccacactggtactgagggctcctcagccgggcgccatacgtaaaccaccgcatgta
accatggcaacgacacctatggtgactctcaggactcagccacagaaccgagtgttcgtg
ggggcgccatctaagatgataacagctgtggcatcgaaaggcagacctggggacagtgct
ggaggatctttcaaggatgatgacgacatcaacgacgtggcctccatggccggtgtgaac
ctgtcggaggagagcgcccgtatcctggcaatcaactcggacctggcgggcacggttatg
cgctcgtgtaaggacgaggctttccttcacacccccatgttgacacggaggatcgctgaa
ataggaaagaagtacggcatcgcggagctgggtcctgaactggtgacgttcgtgtcccac
gccacgcagcagcggctctctagcctcctggagaaggcgtcggtcgtcgcccagcacaag
aatgccaacttcaaggagggtaatcattacgagcaggccagtgatgtccggctgcagctc
aagttctttgagcagctggaccagatggagaagcagcgcaaggaagagcaggagagggag
atcctcatgaaggcagctaagtctcgagcgcggcaagaggaccctgaacagctgcgttta
aaacaaaaagccaaagagatgcagcagcaggagctggctgagatcaggcagagagaggcc
aacctgacggctctggcggccatcggcccgaggaagaggaagaagatggactccccaggc
agttctggagctgctgaggcctcctgctcctcctcagcaagctctggctctggggcatcc
aggcagttcactcgtcagcgcatcactcgcatcaacctcagggacctgctctactgcctg
gagaacgagcactcatctagccactcccagctcctctaccgcgggctcctcaagtag
DBGET
integrated database retrieval system
