Clupea harengus (Atlantic herring): 105909923
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Entry
105909923 CDS
T09045
Symbol
emilin1b
Name
(RefSeq) EMILIN-1b
KO
K24246
emilin
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105909923 (emilin1b)
Domain-containing proteins not elsewhere classified [BR:
char04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
105909923 (emilin1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMI
C1q
Dynamitin
Baculo_PEP_C
ATG17_like
DUF4407
DUF948
Sec10_N
DUF4175
Fez1
COG6_N
EzrA
Tektin
DUF7623
Tropomyosin
AAA_13
Thioredoxin_2
Crescentin
HMMR_N
Motif
Other DBs
NCBI-GeneID:
105909923
NCBI-ProteinID:
XP_031436379
Ensembl:
ENSCHAG00000004898
UniProt:
A0A6P8GAQ0
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All DBs
Position
14:1577728..1619063
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AA seq
1178 aa
AA seq
DB search
MAGPVPFLLILTLTLFGDVWSASYPQRYNLYANAQSQTQTPNGARAASRHRNWCAYVVTK
TVSCVVEDGVETYVKPDYQPCTWGQVQCSRVVMYRTYMRPRYKVAYKMATELEWKCCHGY
SGDDCNDGPSGSSVTQIGTARPWPKPVRPGSGTGPGTGSGGRGDSDKFRQLEEKIQSLSK
DLHSLQSTLRGMNGGKTPADAAQPEMKDTIHSIQTKLDQLDNMTKAHDRTLVSINNHLVN
GKGSGNDLDVIGGSGGVGGSSGGGGGGGGSSGGSSGSGGGGRQNSLKEEILRELERRVSL
SCSSCQSGVEDLKRQQQQDRERIRALEKQMNAMDQRHRQSLDGLRRELTRTQGCCDTVTD
LRGRVGDIDRKIISTSGTVDAIQDRLDKELKGTGGSGGTSGGGRWGGTGTGGTGTGTGGA
GTGAGGADSSLTGPIRDLERRLNNSLQKTEDNCANIENDLRDFFRRELSDIRHDFLNHFS
DQGFLISRVELDVTGIKDDMQNYNKRLSRLENATNHMDKRLRDCTASCRPGSSNVPGRGD
NVPGRGDNGGRGDNVPGRGDNGGRGDNGGRGDNGGRGDNGGLGDNGGRGDNGGRIDNLGG
SKSLEWRVIANEAEIKTFNTRLKDISVSGDSLNDRVVDLSHDVRKIKALTGDNGEHFNRI
VTELESCDICHKVEDELKKLKNITNYSLAKCNTDIRDIRNRVESDDTSCSKVCSNLQEEV
GKLKEDVAKCSGSCKIDLIPTGTGAGPGTGTRPGTGGGGGGGGGGGGGGGLIDPQKPLDG
HSVISGTSNGNLKSLQGELSEVILTFSSINDTLKGLEHTVQKHDSVITDLGNTKDKIISE
IDKIQQEITEHIEDSKGHFDQVDKEIQHFGNNLVVERGDSKRTKDDLDKRLTKLEDVCGR
FDTLSDNVQKIKEGLNKHVSGLWTCLNGLNSTVTSHEGFIETFQNTHLDDIHGKIKSLNS
SVLHVLKEFHVFTEQDIMGLPGPPGPQGERGFPGLPGPRGPSGREGPAGKAGVEGPKGPP
GFQGERGVPGLDANVPRLSFSAALTKPMANSGTIVFDKVFVNEGQKYNPRTGVFTAPLDG
RYFFSAILTGHKNVKLEAVLSKSNYGMARVDSAGYQPEGLENKPVADTKPTPGALAVFNI
ILPLQTGDTVCVDLVMGKLAHSVEPLTIFSGMLLYEDV
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggccggaccagttccgtttcttctgatcttgacgctgactttgtttggagatgtttgg
agcgcgtcttatcctcaacgatacaatctttacgcgaacgcacagtctcagacgcaaact
ccgaacggggctcgagctgccagtaggcacagaaactggtgtgcgtatgtcgtgacgaag
acggtgagctgtgtggtggaggacggggtggagacctacgtgaagcccgactatcagccc
tgcacttggggtcaggtgcagtgctcacgcgtggtcatgtaccggacatacatgcggccc
cggtataaggtggcttacaaaatggccactgaactggagtggaagtgttgccatggttac
agtggtgacgattgtaatgatggaccatccgggagttccgtcactcaaattggaactgcg
agaccgtggcccaaaccggtcaggcccggctctggtactgggccaggcacgggtagtgga
ggaagaggcgacagcgacaagttccggcagctagaggagaaaattcagagcttatccaaa
gacctccacagtctccagtcgacgctgcggggcatgaacgggggcaagacccccgccgac
gccgctcagccggagatgaaagacaccatccacagcatccagaccaagctggaccagctg
gacaacatgaccaaggcccacgaccggacgctggtcagcataaacaaccacctcgtcaac
ggcaagggcagcgggaacgacctggatgtgattggtggcagtgggggcgttggcggcagt
agcggtggtggtggcggcggcggtggcagcagcggtggcagcagcgggagcggtggcgga
ggcaggcagaactcgctgaaggaggagatcctccgggagctggagcggagggtgtcgctg
tcgtgctcgtcctgccagtcgggcgtggaggacctgaagcggcagcagcagcaggaccgg
gagaggatccgcgccctggagaaacagatgaacgccatggaccagcgccaccggcagagc
ctggacggcctgcggcgagaactgacccgcacccaagggtgctgtgacactgtgacggat
ctccgtggaagggttggtgacatagacaggaaaataatctcgacctccggcacagtagat
gctattcaggatcgactggacaaggagctgaaaggcactggtggtagcgggggaacttca
ggtggggggcgttggggagggacagggacaggtgggacaggtacagggacaggtggggcg
gggacaggcgccggtggggcagacagttcactcacaggtcccattcgagaccttgagaga
aggctgaacaattcgctgcagaagacggaggacaattgtgctaacatagaaaatgaccta
agggacttcttcagacgagagctgagtgacattcgccacgacttcctcaaccacttcagc
gaccaaggcttcctgatctcacgggtggagctggacgtgacgggcatcaaggacgacatg
cagaactacaacaagcgtctgtctcgacttgagaacgcaaccaaccacatggacaagagg
ctgagggactgcacagcatcctgtagacccggctcaagcaacgtacctggacgaggagac
aacgtacctggacgaggagacaacggaggacgaggagacaacgtacctggacgaggagac
aacggaggacgaggagacaacggaggacgcggggacaacggaggacgtggggacaacgga
ggactaggagacaacggaggacgcggggacaatggaggacgcatagacaatttagggggc
tctaagtctctggagtggagagtaattgcaaacgaggcggaaatcaagaccttcaacacg
cgtcttaaggacatctctgtgtccggagattcgctcaacgacagggtggtcgacctgagc
cacgacgtccgcaagatcaaagcactgacgggagacaacggggagcacttcaacaggatc
gtcaccgagctcgagagctgtgacatttgccacaaggtcgaggacgagctgaagaagctg
aagaatattacaaactattctctggccaagtgcaacacggacatacgagacatcaggaac
agagtcgaatccgacgacacctcttgctccaaggtgtgctccaacctacaggaagaggtg
ggcaagctgaaagaggacgtggcgaaatgtagtggatcatgcaagattgacctgattcct
acagggaccggagcaggaccgggaactgggacaagaccagggacaggaggaggaggagga
ggaggaggaggaggaggaggaggaggaggtctaatcgacccacagaagccactggacggc
cacagtgtcatcagcggtacgtccaacgggaacctgaagtcgcttcagggagagctgtcc
gaggtcattctcacgttcagctccatcaacgacaccctgaagggcctggagcacaccgtg
caaaagcacgacagcgtcatcaccgacctgggcaacaccaaggacaagatcatctccgag
atcgacaagattcagcaggagatcacggagcacatcgaggacagcaaaggccacttcgac
caagtcgacaaggagatccagcacttcgggaacaacctggtggtagagaggggcgacagc
aagcggaccaaagacgacctggacaagaggctgacgaagctggaggacgtctgtggccgc
ttcgacactctgtccgacaacgttcagaagatcaaagagggcctgaacaaacacgtctct
gggctctggacctgtctgaacggactcaactccacggtgacctctcacgaagggttcatc
gaaaccttccagaacacacacctagacgacattcacggcaagattaagagccttaactcc
tcagtgctccatgtgctcaaagagttccatgtcttcactgagcaggacattatgggtctg
cctggcccaccgggccctcagggagagagaggcttcccgggcctgcctggacccagagga
ccgtcaggaagagaaggaccagcaggcaaggcaggggtggaggggcccaaaggacctcct
ggcttccaaggtgaacgaggtgtgccaggattagatgccaatgtgccacgcctctccttc
tccgccgcgctcactaagcccatggccaactcgggcaccatagtcttcgacaaagtcttt
gtcaatgaaggacagaaatacaatccacgcactggtgtgttcacagctcctttagacggg
cgatacttcttcagcgccatcctgaccggccacaagaacgtgaagctcgaggccgtcctg
tccaagtccaactacggcatggcacgcgtcgactcggccggctaccagccagaaggcctg
gagaacaaaccggtggccgacacgaagccgacgcccggggctctggccgtcttcaacatc
atcctgcccctgcagacgggggacaccgtgtgcgtggacctggtcatgggcaagctggcc
cattccgtagagcccctgaccatcttcagcggcatgctcctctacgaagacgtttaa
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