Clupea harengus (Atlantic herring): 105909954
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Entry
105909954 CDS
T09045
Symbol
cntn3b
Name
(RefSeq) contactin-3 isoform X2
KO
K06761
contactin 3/4/5/6
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105909954 (cntn3b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
char00537
]
105909954 (cntn3b)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
Contactins
105909954 (cntn3b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
char00537
]
Others
105909954 (cntn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Ig_DSCAM-DSCAML_C
C2-set_2
C2-set_3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
105909954
NCBI-ProteinID:
XP_031423000
Ensembl:
ENSCHAG00000025815
UniProt:
A0A6P8FHH0
LinkDB
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Position
5:complement(1423096..1467467)
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AA seq
914 aa
AA seq
DB search
MMLLWKRLVLLSIFGCLAALTEDGVFKGPTLKKEPSDLILPINSPDQEATLQCLADGSPS
PQYRWSLNGTLIDLRRDYRRRVSEGSLIISSLDRDQDTGIYQCTAFNTWGTIHSQKASLQ
FAYLENFKSQTRSAVNVREGQGVVLLCGTPMHSGELTFAWIFNEYPYFVQQDRRRFVSQE
TGNLYIAKVEPSDVGNYTCVVNNSITKGRVLSSPTPLVLRNDGAMGEYEPKIEVHFPDSV
PAAKGSVVRLECFALGNPVPEISWRKTTGDPFPNKVKLRNSNAILEVPRFQQEDAGMYEC
VAENSRGKNAVRGRLSFHAKPHWLQTMKDTTLSIEEHLAWECKASGRPKPSYSWLKNGEM
LTAEGRVQIENGVLSIVSLNLSDAGMYQCVAENKHGIIYASAELMVLASPPSFSKSPLQA
LQKARSGSEVTMECRPQAYPEAISFWKKGNEILQRSERITLLPNGTLKIANVTRRDGGSY
TCIAKNQFGTASALGRLLITEPTRITLGPSNMEIIVGESIVLPCQIAHDPALDVSFSWAF
NGQLVDFDRDGDHFERVGGSIAGDLMIRNIQLNHGGKYVCLIDTDVEHLSADAILIVKGS
PGPPETVLVEEITDSTAQLSWTPGRDNGSPITGYVVQARTPFTVGWQAVDTVPEVINGNT
LTATVVGLNAWVEYEFRVVASNSVGMGEPSPPSPKTRTEDAIPDTAPTDVGGGGGTKSEL
VITWEPVPEELQNGEGFGYIIALRPAGSVTWTRTVVSTPGVAKYVFRNDTIPPFSPFDVK
VGAFNKRGEGPFSSVATVFSAEEVPSLAPVRARGQSMSASEIEVVWEPLRSIPERVLGYE
VVYWEDNTKPDTVGKVRISANYTAVNISGLRGSAQYYLTVSGFNTAGTGPQSAPVNATTK
KPRECLCHMPKPSL
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgatgttactatggaaacgactggtgctgctatcaatctttggctgccttgcagctctc
acagaagatggagtttttaaagggcctaccttgaagaaggagcccagtgacctgatcctt
cccatcaattcccctgaccaggaggccactctccagtgcctggccgatgggagcccatct
ccacagtacagatggtctctaaacggaacgctcattgatctcaggagggactaccggcgt
cgtgtgtctgagggcagtctgatcattagcagtctggaccgagaccaagacaccgggata
tatcagtgcactgccttcaacacgtggggcaccatccacagccagaaagcaagtctccag
tttgcataccttgaaaacttcaaaagtcaaacgaggagtgcagtaaacgtaagggaaggt
caaggagtcgttttattatgtgggacacctatgcattctggagaactcacctttgcctgg
atcttcaatgaatacccctactttgtgcagcaggaccgtcgtcgtttcgtgtcccaggaa
acggggaacttgtacatcgccaaagtggagccgtccgacgtgggcaactacacgtgtgtg
gtgaacaacagcatcaccaaaggaagggtcctcagctctccaaccccgttggtcttgaga
aacgatggagctatgggtgaatacgaacccaaaatagaagtacatttcccagacagtgtt
ccagcagcaaagggatcagtggtcaggctggagtgcttcgctcttggaaacccagtgcca
gagatcagctggagaaagaccactggtgatccgttccccaacaaggtgaagctgaggaac
tccaatgccatactggaggttccccgcttccagcaggaggacgctggcatgtacgagtgc
gtagccgagaacagccggggcaagaacgctgtacgaggaagactgtcttttcatgccaaa
ccccactggctccaaacaatgaaggacaccaccctatcgatagaggagcatttggcttgg
gagtgtaaagctagcggaagacccaagccgtcctacagctggttgaagaacggagagatg
ctgactgcagagggccgagtgcagatcgagaacggagttctctccatcgtttcattaaac
ctgtcagatgccgggatgtatcagtgtgtggcggaaaacaaacacggcattatttatgcc
agcgccgagctaatggtgttagcctcccctccaagcttctcgaagagtccattgcaagcc
cttcagaaggcgcgctcaggcagcgaagtgaccatggagtgcaggcctcaagcctacccc
gaggccatcagtttctggaagaaaggaaatgagattttgcagagaagcgaaaggatcaca
ctgcttcccaatggtacactgaaaattgccaatgtgaccaggagggatggaggaagctac
acatgcatcgctaaaaatcaatttgggacggcaagcgcattgggaaggttgctaattaca
gagcccaccaggatcactctagggccaagcaacatggagatcattgttggcgagagcatc
gtgcttccctgccagatagcccacgacccggccctggatgtgtccttctcctgggcattc
aacgggcagcttgtcgactttgatcgggatggggatcattttgagcgagtaggcgggtcc
attgcaggggatctgatgattcgaaacatccagctgaaccatggcgggaagtatgtctgc
cttatcgacacagatgtggagcatctgtcagctgacgccatattgatcgttaaaggctcc
ccaggccctcctgagacggtgctggtggaggagatcacagatagcacggcgcagctctcc
tggactcccggcagagacaacggaagtcccatcaccggctatgtggtccaagcccgcact
cccttcacggtgggctggcaggcagtcgacacagtccctgaagtcatcaatggaaacaca
ctcactgccactgtggtggggctgaatgcttgggtggagtatgagttccgagtggtggcc
agtaatagtgttgggatgggagagcccagtccaccgtccccaaagacacggaccgaggat
gccatccctgatacagctcccactgatgtcggaggcgggggcggcacaaaatcggaatta
gtgataacatgggagcccgtgcctgaggaactccagaacggcgagggcttcggctacatc
atcgccctgcggccggccggctccgtcacctggacgcgcacggtcgtctccacccccggc
gtggccaagtacgtcttccgcaacgacaccatcccgccgttctcgccgttcgacgtgaag
gtgggggccttcaacaagcggggggaagggcccttcagctccgtcgccaccgtgttctcg
gctgaggaagtgcccagcctggcaccggtgagagcgaggggccagagcatgtcagcgtcc
gagattgaagtggtgtgggaacccctgcgctccatccctgagagagtgctcggttacgag
gttgtgtactgggaggacaacaccaaaccagacacggtgggcaaggtgagaatatccgcc
aactacacggcggtgaacatcagcggcctgcggggaagcgcccagtattacctgacggtg
agcggcttcaacacggccggcactgggccccagtccgcgcccgtcaacgccaccaccaag
aaaccccgtgagtgtctctgtcacatgccgaagccttcactgtga
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