KEGG   Clupea harengus (Atlantic herring): 105909963
Entry
105909963         CDS       T09045                                 
Symbol
cntn4
Name
(RefSeq) contactin-4
  KO
K06762  contactin 4
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:char04515]
    105909963 (cntn4)
Cell adhesion molecules [BR:char04515]
 Immunoglobulin superfamily
  Contactins
   105909963 (cntn4)
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 V-set Ig_C17orf99 Sp38 Pur_ac_phosph_N C2-set_2 Ig_5 Tissue_fac Interfer-bind Herpes_gE_N NDNF Nuc_sug_transp
Other DBs
NCBI-GeneID: 105909963
NCBI-ProteinID: XP_012694087
Ensembl: ENSCHAG00000027695
UniProt: A0A6P3WBU1
LinkDB
Position
5:1746854..1844428
AA seq 1033 aa
MMLLWKLLVLQSFMGCLAVGSGLQSPVFTKQPGSIVFPVDSLEKSREVVFSCEAQGSPPP
FYRWRLNGSIIDPTSGSHYTLSGGNLRISHLNKDQDAGTYQCLASNSFGTIISREASLTF
AYLENFKTHRRSSVSVREGQGVVLLCGPPSHSGGLTFSWIFNKYPSVVKQDSRRFISQET
GNLYIAKVEPSDVGNYTCVVTNTVTKTRVEGPPTPLVLRSDGVMGEYEPKIEVQFPELVP
VAKGSTVKLECFALGNPVPSITWRRVDGVLFSRKVDMRKASGVLEIPYFQQEDAGIYECT
AENAKGRNAVKGKLSFYAPPQLIELPQDVQKAIDESLVWECKATGKPKPSYRWMRNGENL
ESVEGRVQVVNGALTISRLTMADMGMYQCVAENKHGEVYSNAELKVVAVAPDFSQNLVKT
HTMVREGGDVLIECRPKMSPRGLISWRKGTEALRATSRISILDSGSLRISNATKSDAGLY
TCVASNQFGEASSAGSLLVKEPTVITTQPATLDVTVGESIVLPCQVTHDPSLEPRFTWFF
NEQLINFGSHGGYFEKVGGHSSGDIMIRNIQLRHAGKYTCAVQTKVDSISIATDLIVRGP
PGPPTSVHVEEISDSTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPELVGGRR
LTATVTDLSPWVEYEYRVLASNAIGTGEPSKPSKQARTKETLPKVTPANVSGGGGSRSEL
VITWEPVPEELQNGEGFGYVVAFRPLNATGWMQAAVPLADASRYIFKNDSVQPFSPFQVK
VGVYNNKGEGPFGPTVTVYSAEEEPVRTPNRVRAKSLSASDVEVTWRGLPWYTSKKPDQS
KRILGYELRYWEKTEKEETASVLRTVGNQTSAIIQGLKGSTTYYVTVRAYNTAGSGPPSG
ISNVTTKKPPPSQPPLKVMWNTSNSKIILNWERVKALENESEVMGYKVLYKRNRHSRPSV
METNTTSVELSLPTDEEYIIQIKPFGEGGEGSSSRQITIPRISGSPAMGSASTVSTLSAL
STIALSFTARTSL
NT seq 3102 nt   +upstreamnt  +downstreamnt
atgatgttgctatggaaactgctggtgctgcagtcattcatggggtgcctcgcagtgggc
agtggcctgcagagccctgtctttaccaaacagcccggcagcatcgtgtttcccgtggac
tccctggagaagagcagggaggtggtcttcagctgcgaggcacagggcagcccgcctcca
ttttacaggtggaggctgaatggatccattatcgacccaacatcaggctcccactacacc
ctgtctggaggaaacctgcgcatcagccacctgaacaaagaccaagatgcagggacgtac
cagtgcctcgcctccaactcttttgggaccatcatcagccgagaggcgagtctaaccttc
gcatacctggaaaacttcaagacccacagacggagctcagtgtcggtgcgtgaaggacag
ggcgtggtacttctgtgcggacctccctcccactctggaggtctgacgttttcctggatt
tttaacaagtacccgtcggtcgtcaaacaggacagtcgacgattcatatcccaagagacg
ggtaatctctacatcgccaaggtggagccatctgatgtgggcaactacacctgtgtggtc
accaacaccgtcacgaagaccagggtagaaggtcctcctactccactagtgctacgctct
gatggtgtgatgggtgaatatgaaccaaagattgaagtgcagtttccagagctggttcca
gtagccaaaggctccactgtgaagctggagtgttttgccttaggaaacccggtcccatcc
ataacatggcggagggtggacggcgtcctcttctctcggaaggtggacatgcgcaaagcc
agcggcgtcctggaaatcccctacttccagcaggaggatgccgggatctacgagtgcaca
gcagagaatgcgaaagggaggaacgcggtgaaaggcaaactgtctttctatgcccctccc
cagctgatcgagcttcctcaggacgtgcagaaggccatcgacgagtctctggtgtgggag
tgcaaggccaccggcaagcccaagccgtcctacagatggatgagaaacggagagaatctc
gagtcggtcgagggcagagtgcaggtcgtcaacggggccctgaccattagccgactgacg
atggccgacatgggcatgtaccagtgtgtggccgaaaacaaacacggcgaggtgtacagc
aacgccgagctgaaagttgtcgctgtggcgccggatttctcgcagaacctggtgaagacg
cacacgatggtgcgcgagggcggcgatgtgctaatcgaatgtcggcctaagatgtccccc
cggggcctgatctcctggaggaagggaaccgaggcactgcgcgcgaccagcaggatttcc
atcttggacagtggaagcctgaggatatcaaatgcgaccaaatcagatgcaggtctctac
acctgcgttgccagtaaccagtttggagaggccagcagtgctgggagtctcctggttaaa
gagcccacggtgatcaccacccagccggcgacgctggacgtgacggtgggggagagcatc
gtcctgccctgccaggtgacccatgacccctccctggagccccgcttcacctggttcttc
aatgagcagctcatcaacttcggaagccacggcggctactttgagaaagtcggaggacac
tcttccggggatatcatgatccggaacattcagctgaggcatgctgggaagtatacctgc
gccgtgcagaccaaggtggacagcatctccatcgccacagacctgattgttcgaggtcct
ccgggcccgcccacgagcgtccatgtggaagaaatcagcgatagcacagcttccctctcc
tggaggcctgggcctgataatcacagtccaattaccgcatacaccatccaggcgaggacg
cccttctcgctgggctggcaggccgtcaccacagttccggagctggtgggggggcggcgt
ctgacggccaccgtgaccgacctgagcccctgggtggagtacgagtaccgagtcctggca
agcaacgccatcggaaccggagagcccagcaagccctccaagcaagcacggaccaaagaa
accttgccaaaggtcacgccggccaatgtgagcggaggagggggcagccgctcagagcta
gtcatcacctgggagcctgtccctgaggagctgcagaatggcgaaggcttcggctacgtg
gtggccttcaggccgctcaacgccacaggctggatgcaggccgccgtgcccttggccgac
gcctccagatacatcttcaaaaacgacagcgtccagcccttctcgcccttccaagtcaaa
gtgggcgtctacaacaataaaggagagggccccttcggacccacagtgaccgtgtactcc
gccgaggaggagccggtgcgaacacccaacagagtccgtgccaagagtctgtcggcttca
gacgtggaggtgacatggagaggcttgccctggtacacaagcaagaagcccgaccagagc
aaaagaatcctcggctacgagctgagatactgggagaagacggaaaaggaggagacggca
agcgtgctgaggacggtgggcaatcagacgtcggccattatccagggtctgaaaggaagt
accacctactacgtgacggtgcgagcatacaacacggcgggctccggacccccgagcggc
atctccaacgtcaccaccaagaagccacctcccagccagcctccacttaaagtcatgtgg
aacacgtcgaactccaagatcatcctgaactgggaacgagtgaaagccctggagaacgag
tcggaggtcatgggctacaaagtgctctacaaacggaacaggcacagtcggcccagcgtc
atggagaccaacaccacctcggtggagctctccctccccaccgacgaggagtacatcatc
cagatcaagccctttggagagggcggcgagggcagcagcagcagacaaatcaccatcccc
agaatatcaggttcccctgcgatgggctcagcctccacagtgtccaccctgtcggcgctc
agcacaatagcactttccttcacagcacggacatccttatga

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