Clupea harengus (Atlantic herring): 105909963
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Entry
105909963 CDS
T09045
Symbol
cntn4
Name
(RefSeq) contactin-4
KO
K06762
contactin 4
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105909963 (cntn4)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
Contactins
105909963 (cntn4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_C17orf99
Sp38
Pur_ac_phosph_N
C2-set_2
Ig_5
Tissue_fac
Interfer-bind
Herpes_gE_N
NDNF
Nuc_sug_transp
Motif
Other DBs
NCBI-GeneID:
105909963
NCBI-ProteinID:
XP_012694087
Ensembl:
ENSCHAG00000027695
UniProt:
A0A6P3WBU1
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All DBs
Position
5:1746854..1844428
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AA seq
1033 aa
AA seq
DB search
MMLLWKLLVLQSFMGCLAVGSGLQSPVFTKQPGSIVFPVDSLEKSREVVFSCEAQGSPPP
FYRWRLNGSIIDPTSGSHYTLSGGNLRISHLNKDQDAGTYQCLASNSFGTIISREASLTF
AYLENFKTHRRSSVSVREGQGVVLLCGPPSHSGGLTFSWIFNKYPSVVKQDSRRFISQET
GNLYIAKVEPSDVGNYTCVVTNTVTKTRVEGPPTPLVLRSDGVMGEYEPKIEVQFPELVP
VAKGSTVKLECFALGNPVPSITWRRVDGVLFSRKVDMRKASGVLEIPYFQQEDAGIYECT
AENAKGRNAVKGKLSFYAPPQLIELPQDVQKAIDESLVWECKATGKPKPSYRWMRNGENL
ESVEGRVQVVNGALTISRLTMADMGMYQCVAENKHGEVYSNAELKVVAVAPDFSQNLVKT
HTMVREGGDVLIECRPKMSPRGLISWRKGTEALRATSRISILDSGSLRISNATKSDAGLY
TCVASNQFGEASSAGSLLVKEPTVITTQPATLDVTVGESIVLPCQVTHDPSLEPRFTWFF
NEQLINFGSHGGYFEKVGGHSSGDIMIRNIQLRHAGKYTCAVQTKVDSISIATDLIVRGP
PGPPTSVHVEEISDSTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPELVGGRR
LTATVTDLSPWVEYEYRVLASNAIGTGEPSKPSKQARTKETLPKVTPANVSGGGGSRSEL
VITWEPVPEELQNGEGFGYVVAFRPLNATGWMQAAVPLADASRYIFKNDSVQPFSPFQVK
VGVYNNKGEGPFGPTVTVYSAEEEPVRTPNRVRAKSLSASDVEVTWRGLPWYTSKKPDQS
KRILGYELRYWEKTEKEETASVLRTVGNQTSAIIQGLKGSTTYYVTVRAYNTAGSGPPSG
ISNVTTKKPPPSQPPLKVMWNTSNSKIILNWERVKALENESEVMGYKVLYKRNRHSRPSV
METNTTSVELSLPTDEEYIIQIKPFGEGGEGSSSRQITIPRISGSPAMGSASTVSTLSAL
STIALSFTARTSL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactgctggtgctgcagtcattcatggggtgcctcgcagtgggc
agtggcctgcagagccctgtctttaccaaacagcccggcagcatcgtgtttcccgtggac
tccctggagaagagcagggaggtggtcttcagctgcgaggcacagggcagcccgcctcca
ttttacaggtggaggctgaatggatccattatcgacccaacatcaggctcccactacacc
ctgtctggaggaaacctgcgcatcagccacctgaacaaagaccaagatgcagggacgtac
cagtgcctcgcctccaactcttttgggaccatcatcagccgagaggcgagtctaaccttc
gcatacctggaaaacttcaagacccacagacggagctcagtgtcggtgcgtgaaggacag
ggcgtggtacttctgtgcggacctccctcccactctggaggtctgacgttttcctggatt
tttaacaagtacccgtcggtcgtcaaacaggacagtcgacgattcatatcccaagagacg
ggtaatctctacatcgccaaggtggagccatctgatgtgggcaactacacctgtgtggtc
accaacaccgtcacgaagaccagggtagaaggtcctcctactccactagtgctacgctct
gatggtgtgatgggtgaatatgaaccaaagattgaagtgcagtttccagagctggttcca
gtagccaaaggctccactgtgaagctggagtgttttgccttaggaaacccggtcccatcc
ataacatggcggagggtggacggcgtcctcttctctcggaaggtggacatgcgcaaagcc
agcggcgtcctggaaatcccctacttccagcaggaggatgccgggatctacgagtgcaca
gcagagaatgcgaaagggaggaacgcggtgaaaggcaaactgtctttctatgcccctccc
cagctgatcgagcttcctcaggacgtgcagaaggccatcgacgagtctctggtgtgggag
tgcaaggccaccggcaagcccaagccgtcctacagatggatgagaaacggagagaatctc
gagtcggtcgagggcagagtgcaggtcgtcaacggggccctgaccattagccgactgacg
atggccgacatgggcatgtaccagtgtgtggccgaaaacaaacacggcgaggtgtacagc
aacgccgagctgaaagttgtcgctgtggcgccggatttctcgcagaacctggtgaagacg
cacacgatggtgcgcgagggcggcgatgtgctaatcgaatgtcggcctaagatgtccccc
cggggcctgatctcctggaggaagggaaccgaggcactgcgcgcgaccagcaggatttcc
atcttggacagtggaagcctgaggatatcaaatgcgaccaaatcagatgcaggtctctac
acctgcgttgccagtaaccagtttggagaggccagcagtgctgggagtctcctggttaaa
gagcccacggtgatcaccacccagccggcgacgctggacgtgacggtgggggagagcatc
gtcctgccctgccaggtgacccatgacccctccctggagccccgcttcacctggttcttc
aatgagcagctcatcaacttcggaagccacggcggctactttgagaaagtcggaggacac
tcttccggggatatcatgatccggaacattcagctgaggcatgctgggaagtatacctgc
gccgtgcagaccaaggtggacagcatctccatcgccacagacctgattgttcgaggtcct
ccgggcccgcccacgagcgtccatgtggaagaaatcagcgatagcacagcttccctctcc
tggaggcctgggcctgataatcacagtccaattaccgcatacaccatccaggcgaggacg
cccttctcgctgggctggcaggccgtcaccacagttccggagctggtgggggggcggcgt
ctgacggccaccgtgaccgacctgagcccctgggtggagtacgagtaccgagtcctggca
agcaacgccatcggaaccggagagcccagcaagccctccaagcaagcacggaccaaagaa
accttgccaaaggtcacgccggccaatgtgagcggaggagggggcagccgctcagagcta
gtcatcacctgggagcctgtccctgaggagctgcagaatggcgaaggcttcggctacgtg
gtggccttcaggccgctcaacgccacaggctggatgcaggccgccgtgcccttggccgac
gcctccagatacatcttcaaaaacgacagcgtccagcccttctcgcccttccaagtcaaa
gtgggcgtctacaacaataaaggagagggccccttcggacccacagtgaccgtgtactcc
gccgaggaggagccggtgcgaacacccaacagagtccgtgccaagagtctgtcggcttca
gacgtggaggtgacatggagaggcttgccctggtacacaagcaagaagcccgaccagagc
aaaagaatcctcggctacgagctgagatactgggagaagacggaaaaggaggagacggca
agcgtgctgaggacggtgggcaatcagacgtcggccattatccagggtctgaaaggaagt
accacctactacgtgacggtgcgagcatacaacacggcgggctccggacccccgagcggc
atctccaacgtcaccaccaagaagccacctcccagccagcctccacttaaagtcatgtgg
aacacgtcgaactccaagatcatcctgaactgggaacgagtgaaagccctggagaacgag
tcggaggtcatgggctacaaagtgctctacaaacggaacaggcacagtcggcccagcgtc
atggagaccaacaccacctcggtggagctctccctccccaccgacgaggagtacatcatc
cagatcaagccctttggagagggcggcgagggcagcagcagcagacaaatcaccatcccc
agaatatcaggttcccctgcgatgggctcagcctccacagtgtccaccctgtcggcgctc
agcacaatagcactttccttcacagcacggacatccttatga
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