Clupea harengus (Atlantic herring): 105909964
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Entry
105909964 CDS
T09045
Symbol
lrrn1
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105909964 (lrrn1)
Domain-containing proteins not elsewhere classified [BR:
char04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
105909964 (lrrn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_9
LRR_1
ig
LRR_EndoS
Ig_2
V-set
LRR_Zer-1
fn3
Pur_ac_phosph_N
LRRCT
Peptidase_M73
Ig_6
LSR
Fn3_ELFN
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
105909964
NCBI-ProteinID:
XP_012694089
UniProt:
A0A6P3WB83
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Position
5:complement(611816..622769)
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AA seq
717 aa
AA seq
DB search
MARETFNLCGLGWVGCVLLLAQFGPSSVQGSECPQLCVCEIRPWFTPQSTYREAITVDCN
DLRLTRIPGNLSSDTQVLLLQSNYISRTSEELEQLYNLTELDLSQNNFSNIRDVGLTNMS
QLTTLHLEENQIVEMPDFCLQDLTNLQELYINHNQITTISPNAFSGLHNLLRLHLNSNKL
KAIDNRWFESTPNLEILMIGENPVVGIQNMNFKPLVNLRSLVLAGMDLTDVPGNAFIGLV
NLESLSFYDNKLVRVPQNALQKLPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMAE
LAAIDRYALDNLPELTKLEATNNPKFSYVNRQAFRDVASLESLMLNNNALNSLYQATVES
LPNLREISIHSNPLRCDCVIQWMTSNKTSIRFMEPLSMFCAMPPEFRGQHVREVLIHDSP
EQCLPMISHDAFPDHLNLDIGMTVDLDCRAMAEPEPEVYWVTPLGSKVMMDTVSDKYHLN
NQGTLRISNIKVEDSGRYTCVAQNVEGADTQVTALRVNGTLMDSTQLMKIYVKHTESHSI
LVSWKVNSNVMTSNLKWSSATMKIDNPHITYTAKVPVDVHEYNLTHLQPATEYEVCLSVS
NIHQQTQKSCVNVTTKHATFAVEISDQGTNTALAAVMGTMFAIISLASIAVYISKRWKRK
NYHHSLKKYMQKTSSIPLNELYPPLINLWDADYEKDKDGSSENKSTQVDTTRSYYMW
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctagagagactttcaacctttgtgggctgggctgggtaggctgcgtgttactgctt
gcgcagttcggaccgtcctctgttcagggcagtgagtgtcctcagctgtgcgtgtgcgag
attcgcccttggttcacccctcagtccacctaccgagaagccatcaccgtcgactgcaat
gaccttcgtctgactcggattcctggcaacctgtccagcgacacacaggtgctcctgctg
cagagcaactacatatccagaaccagcgaggaactggagcagctttacaatctgaccgaa
ctggacctttcccagaacaacttcagcaacatccgggacgtgggcctcaccaacatgtcc
cagctcaccactcttcacctggaggagaaccagatcgtggagatgcccgatttctgccta
caggatctgaccaatctgcaagagctgtacatcaaccacaaccagattaccaccatctca
cccaatgctttctcgggattgcacaacctgcttaggctccatctcaactccaataaactc
aaggccattgacaatcgctggtttgagtcgacacccaaccttgaaatcctgatgattgga
gagaatccagtggttggcatccaaaatatgaattttaagccccttgttaatttacggagc
ttggtgcttgcagggatggatttgacagacgttcctggaaatgcctttattggactggta
aacttggaaagtctttctttttatgacaacaaacttgtcagggtaccacaaaatgctctt
cagaaactccccaatttgaagtttttggatttaaataaaaatcccatccacaaaatccaa
gaaggggatttcaagaacatgctaaggctgaaagagcttggtattaacaacatggctgag
ctggctgccatcgatcgctacgcattggataatctcccagagctgaccaaactcgaggcc
accaacaatccaaaattctcctacgtgaaccgtcaagcattccgtgacgtcgcttcactg
gaaagcctcatgctgaacaacaacgctcttaactccctctatcaggcgactgtggagtcc
cttcctaacctgcgtgagatcagcatccacagcaaccccctgcgatgcgactgcgtcatt
cagtggatgacctccaacaagaccagcatccgcttcatggagccactctccatgttttgc
gccatgcctccggagttccgaggtcagcacgtcagggaggttttgattcatgactccccg
gagcagtgcctgcccatgatatcccacgacgccttccctgatcacctcaacttggacatc
ggcatgactgtggatcttgactgtcgtgccatggctgaacccgagccagaggtctactgg
gtcacgccgctgggcagcaaagttatgatggacactgtgtccgataagtaccacctaaat
aaccaggggaccttgcgcatttccaacatcaaagttgaggactctggccggtacacttgt
gtggcccagaacgtggaaggggcagacacacaagtgactgctctccgtgtcaacggcact
ctcatggacagcacacagctcatgaagatctatgtcaaacacacagagtcccattccatc
ctggtgtcctggaaggtcaattcaaacgtcatgacatcgaacctcaagtggtcttctgcc
accatgaaaatagacaacccccacatcacctacactgccaaggtccccgtggacgtgcac
gagtacaacctcactcatctgcagccggccacagagtacgaagtttgtctgtctgtctcc
aacatccaccagcagacacagaagtcctgcgttaatgtcacaacgaagcatgctacgttt
gcagtggagatctcagatcagggcaccaacacagctcttgcggcagtcatgggcaccatg
tttgccatcatcagcttggcctccattgctgtatatattagcaagagatggaagaggaag
aactaccaccactctctgaaaaaatacatgcagaagacatcttcaatccccctgaacgag
ttgtaccctcctctaatcaacctgtgggatgccgactatgagaaagacaaggatggatct
tcagagaacaagtccacccaggttgacacaacaagaagttattacatgtggtga
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