Clupea harengus (Atlantic herring): 105910007
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Entry
105910007 CDS
T09045
Symbol
ptprub
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105910007 (ptprub)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105910007 (ptprub)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
105910007 (ptprub)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
105910007 (ptprub)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
Type II RPTP family
105910007 (ptprub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
ig
Tc-R-P
Ig_3
DSPc
Pur_ac_phosph_N
I-set
Y_phosphatase3
Ig_DSCAM-DSCAML_C
PTPlike_phytase
PTP_tm
Motif
Other DBs
NCBI-GeneID:
105910007
NCBI-ProteinID:
XP_031431466
Ensembl:
ENSCHAG00000006963
UniProt:
A0A6P8G609
LinkDB
All DBs
Position
11:14696417..14898190
Genome browser
AA seq
1476 aa
AA seq
DB search
MNTCALLLILAVHIHADGNEGPTAVGCTFDEDSNPSLCEYSQGEDDDFDWQLFRSHGTSH
ASTDLLRGSYLMVNSSQHAPGQRAQLLLQTLSENDTHCVQFSFFLYSRDGHSPGALRVYV
RVNGGVLGLPVWNVSGSHGRQWHQVELAVSMFWPNEYQILLEAIISKERHGYIAIDDIMI
LNYPCYKAPHFSRLGDMEVNVGQNASFQCVASGRPSETETFLLERHNGKVTTSTSVKHLN
YRRFVASFQLDNVQKPEQDLYRCVALSPRGAGVSNFAELLVKVPPSPIAPPQLLRAGSTY
LIIQLNTNSILGDGPIIRREIEFRASHLPFSEINGVNMVTYKLWHLDPDTEYQVSVMLTR
PGEGGTGPSGPPLISRTKCAEPMRALRGLTATDIQPRQLTLQWETLAFNVTRCHTYSVSL
CFRYSTGNAVGGSTGAGAAAASTGISGAGGHNTTVRECLAVERNTSRITLRDLPPYHAVH
VRLSLANTEGKKEGREMGFQTEEDIPGGIAPESLTFTPLEDMIFMKWEEPVEPNGLITQY
EISYQSIESTDPSVNVPGPRRTVSKLRNETYHMFSNLHPGTTYLISVRARTAKGFGQTAL
TEITTNISAPTFDYGDMPSPLSETESTITVLLRPAQGRGAPVSTYQVVVEEESGRRVRRE
LGPQECFPLPTSHSEAQARGAPHYYTAELPPSNLTEARYFTVGDNHTFNGYWNAPLDPRK
NYIIYFQAMSNFRGDTRINCVRIARKAACKDHRRALEVSQHSEEMGLILGVCAGGLVVLI
LLLGAIIIIIKKGRDYYSYSYYPRKPGTMNKTPITYRQEKNHMMGSMERSFTDQSTLQED
ERMALSFMDAHTCSTRSDPRSSMNESSSLLGGSPRRQCGGRKGSPYHTGQLHPAVRVADL
LQHINQMKTAEGYGFKQEYESFFEGWDVTKKKDKTKGRQDTLMGYDRHRVKLHPLLGDPN
SDYINANYIDIRINREGYHRSNHFIATQVLCSGPKQETVYDFWRMVWQENCFSIVMITKL
VEVGRVKCCKYWPDDSELYGDIKITLLKTETLAEYTVRTFSLERRGYSAKHEVRQFHFTS
WPEHGVPYHATGLLAFIRRVKASTPPDAGPVVVHCSMGAGRTGCYIVLDVMLDMAECEGV
VDIYNCVKTLCSRRINMIQTEEQYVFIHDAILEACLCGETAILVNEFAPTYKEMLRVDSQ
SNSSQLREEFQTLNSVTPHLDVEECSIALLPRNREKNRSMDVLPPDRALAFLVTTEGESN
NYINAALADSFHQQAAFIVTPHPLPGTTADFWRLVFDYGCTSVVMLNQLNQSNSAWPCVQ
YWPEPDMQQYGPMQVEFLSVSADDDVITRVFRVKNVTRLQEGQLVVCQFQFLRWSAYRDV
PDSKKSFLNLLAHVHKWQRECGDGRTVVHCLNGGGRCGTFCASTILLEMIQYQNMVDVFY
AVKTLRNAKPNMVESLDQYRFCYDLVLEYLDCMEVR
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctgtgctttactgttgattttggctgtccacatccatgccgatggcaatgaa
ggaccaacagcagttgggtgcacgtttgacgaggactccaatcccagcctgtgtgagtac
agtcaaggggaggatgatgactttgactggcagctcttccggagccacggcacctcccat
gcctccacagacctcctccgagggtcctacttgatggtgaactcttcccagcatgctcca
gggcagcgggcccagctgctgttgcagacgctgagtgagaacgacacacactgcgtgcag
ttcagcttcttcctgtacagccgcgatggccacagccccggggcgctgcgcgtgtacgtg
cgcgtcaatggtggtgtgcttggcctgcctgtctggaatgtctccggctcccatggacgc
cagtggcaccaggtggagctagccgttagcatgttctggcccaacgagtatcagatcttg
ctggaggcgatcatctctaaagaacgccatggttacatcgccattgacgacatcatgata
ctgaattacccttgctataaagctccgcacttctctcgactgggagacatggaggtcaat
gtcgggcagaatgcctctttccagtgtgtggcatcggggcggccttcggaaacagaaaca
tttctcctggagcgacacaacgggaaagtgacgacctccacctcggtcaagcacctgaac
taccggcgctttgtggcctccttccagctggacaacgtccagaagccggagcaggacctc
taccgctgcgtggccctctccccccgaggcgcaggggtgtctaacttcgccgagctcctc
gtcaaagttcccccatctcccatcgcacccccccagttactcagagctggctccacctac
ctgatcatccagctcaacaccaactcgatcctgggcgacggccccatcatccgccgcgag
atcgagttccgcgccagccacctgcccttctccgagatcaacggcgtcaacatggtcacc
tacaagctctggcacctcgacccagacactgagtaccaggtcagcgtgatgctgacccgg
cccggggagggcggcaccggcccatctggacccccactcattagcaggaccaagtgtgca
gagcccatgcgtgccctgagaggcctgacggccacagatatccagccccggcagctgacc
ctgcagtgggagactctggccttcaacgtgacgcgctgccacacctactccgtgtcgctc
tgcttccgctactccacgggcaacgccgttggcggcagcaccggggcgggcgcggccgcg
gcctcgacgggcatcagcggggccggaggccacaacaccacggtgcgcgagtgcctggcc
gtggaacgcaacacctcgcgcatcaccctgcgtgacctgcccccgtaccacgccgtccac
gtgcgtctgtcgctcgccaacacggagggcaagaaggagggacgtgaaatgggctttcag
acggaggaggacattcctggcggcattgcccctgagtccctgactttcacgccattggag
gacatgatttttatgaagtgggaggagccagtggaacccaatggtcttatcactcaatat
gagatcagctaccagagcatcgagtcgaccgacccaagtgtcaatgtgccgggcccaagg
cgcacggtgtccaaactgaggaacgagacgtaccacatgttctccaacctccatccagga
accacgtacctgatctcagtgagagcccgcacggccaaaggtttcggccagacagccctt
actgagattaccaccaacatctctgctcccacctttgactatggggacatgccctctcca
ctgagtgagactgagagcactatcactgtactgctgcggccagctcaaggcagaggagct
ccagtcagcacctaccaggtggtggtcgaggaggagagtggccggagggtgaggcgtgag
ctgggcccacaggagtgcttccccctgcccacctctcacagcgaggctcaggcgcgcggg
gccccccactactacacggccgagctgccccccagcaacctcaccgaggcgcgctacttc
accgtcggcgacaaccacactttcaacggctactggaacgcgcccctcgaccccaggaag
aactacatcatctacttccaggccatgagcaacttcagaggggataccaggatcaactgc
gtccgcattgcccgcaaagctgcgtgtaaagaccaccggcgggccctggaggtgtcccag
cactccgaggagatgggcctgatcctgggggtgtgtgccgggggcctggtggtgctcatc
ttgctgctgggcgccatcatcatcataataaagaaaggaagagactactactcttactct
tattatcctaggaagccaggcaccatgaataagacccccatcacctaccgtcaggagaag
aaccacatgatgggttccatggagcgcagcttcaccgaccagagcacgctgcaggaggac
gagcgcatggccctgtccttcatggacgcgcacacatgcagcacgcgcagtgatcctcgc
agctcgatgaacgagtccagcagcctgctgggggggtctccgcggcgacagtgtggtggg
cgtaagggctccccctaccacacggggcaactccacccggcagtacgcgtggccgacctc
ctgcagcacatcaaccagatgaagacggccgagggctacggcttcaagcaggagtatgag
agttttttcgagggctgggacgtaaccaagaagaaggacaagaccaaaggcagacaagac
accttaatgggctatgaccgccacagggtgaagcttcatccactgctcggagaccccaac
tcagactacatcaatgccaactacattgacattcggataaacagggaaggctaccatcga
tccaaccacttcatcgccactcaggttctctgttcaggacccaagcaggagacggtgtat
gacttctggaggatggtgtggcaggagaactgtttcagcattgtcatgatcaccaagctg
gtggaggtgggcagggtaaagtgctgtaagtactggcctgatgacagtgagctgtatggg
gacattaagatcacactcctgaagactgagaccctggccgaatacactgtgcgcaccttc
agtctggagaggaggggctactctgccaaacatgaggtgcgacagttccacttcacctcc
tggccggagcacggcgtgccctaccacgccactggcctgctggccttcatcaggcgggtc
aaagcctccacgccacccgatgctgggcctgtggtggtgcactgcagcatgggtgctggc
cgcactggctgctacatcgtgctggatgtgatgctggacatggcagagtgtgaaggagtt
gtggacatttataactgtgtcaaaacactctgctcacgtcgcatcaatatgatacagacc
gaggagcagtacgtgttcatccacgacgccatcctggaggcctgcctgtgtggagagacg
gccatcctggtgaacgagtttgcccccacctacaaggagatgctgcgggtggactcccag
agcaactcgtcccagctccgtgaggagttccagactctgaactctgtgacgcctcacctg
gacgtggaggagtgcagcatcgcgctgttgccacgcaaccgtgagaagaaccgcagcatg
gacgtgctgcctccggaccgcgcgctggccttcctggtgaccaccgagggcgagagcaac
aactacatcaacgccgcgctggccgacagcttccaccagcaggccgccttcatcgtcacg
ccgcacccactgcccggcactaccgccgacttctggaggctggtgttcgactacggatgc
acctccgtggtcatgctcaatcagcttaaccagtccaattctgcctggccgtgtgtgcag
tattggccagagccggacatgcagcagtacggccccatgcaggtggagtttctctctgtg
tccgcggacgatgatgtcatcacgcgtgtcttccgtgtgaaaaacgttacaaggctgcag
gaaggccagctggtggtgtgccagttccagttcctgcgctggtctgcgtaccgagacgtc
cccgactccaagaagtccttcctcaacctgctggcacatgtgcacaagtggcagagggag
tgtggagacgggcgcactgtcgtccactgcctgaatggcggagggcgctgtggtaccttc
tgcgcctcaaccatcctgctggagatgatccagtaccagaacatggtagacgtgttctac
gccgtcaagacgctgcgcaacgccaagcccaacatggtggaatctctggaccagtaccgg
ttctgctatgacctggtgctggagtacctggactgcatggaggtgagatag
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integrated database retrieval system
