Clupea harengus (Atlantic herring): 105910020
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Entry
105910020 CDS
T09045
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105910020 (ascc3)
Enzymes [BR:
char01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105910020 (ascc3)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
105910020 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
105910020
NCBI-ProteinID:
XP_031431611
Ensembl:
ENSCHAG00000015189
UniProt:
A0A6P8G6C0
LinkDB
All DBs
Position
11:16122407..16292743
Genome browser
AA seq
2208 aa
AA seq
DB search
MSPPRLTGALRSFSSVCKKEDIAEDEYNLKAKRLKRQERFAKEGLTWQKIVQFFTQHLDK
KDQQAAQQELKGLLHSAKQIVGADHGQDTIESAGVFLFETFLGRERLGAEETRAVRHMFG
PFSATAAEACLASVSRLVTSVGEAEAFVRTQNAGRYGLGDASSTAFGRNIAFSHDGYILD
CHEPPPWLDVPDEDAGDLGFEDFLNNHVGRGQAAGSGAQAGGSGGGRDTGASILREEVDK
YQNAGNMMSSSPEELCTSLFEMLASQKSDEELQNELFEFLGADGFEVILNLLQRRSDIVD
ALLSMPPEKRGNYVPAGGAEGSRPAYGCQVVVQSKQERLMMKMNRREEKRERKREKRVDD
GGEYAEASFAFDPKEMRLQREQALLTARRSPVLGRHYEPERIRFPNVYDSFAEAVKTSAF
VGGAKLMLPEGIRRDNNKLYEEVSIPPTEPMPLGFEEKAIYITDLDEIGQVVFKGMERLN
RIQSIVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQNLQPGGVIRKDQFKIVYVA
PMKALAAEMTNYFSKRLQPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVG
DVALSQVVRLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPNYLDV
ASFLHVNPYIGLFYFDSRFRPVPLGQSFLGVKATGKIQQLHDMEEVCYENVLKQIRNGHQ
VMVFVHARNATVRTAMNLIEMAKNRGEVSFFQVDHGPDYGQCEKQVQRSRNKQMREMFPE
GFGIHHAGMLRQDRTLMENMFSRGYLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGA
LVDLGILDVMQIFGRAGRPQFDKYGEGTIITTHDKLSHYLTLLTQQNPIESQFLQSLADN
LNAEVALGTVTNVEEAVKWLSYTYLFVRMRANPLAYGINYKACQMDPGLDLYRKELVVEA
GRKLDKARMIRFEERTGYFHSTDMGRTASHFYIKYNTIETFNELFSAQKTEADILSIVSK
AEEFEQVKVRDEESEELERLLTDVCQLPAAGGVENGYGKINILLQTYIGRGEVDSFSLIS
DLSYVAQNAARIVRALFEIALRKRWPGMTYRLLNLCKVIDKRLWGWAHPLRQFAMLPHTV
LGRLEDRNLSVDMLKEMSKDEIGHMLHHVNIGLKVKQAVHQIPAILMEASIQPITRTVLR
VRLTVTPDFRWNDQVHGSVGEPWWLWVEDPVNDHIYHSEYFMLQKKQVVTDEPQQVVFTI
PIFEPMPSQYYIRAVSDRWIGSEAVCIINFQHLILPERHPPHTELLDLQPLPVTALGNRA
YETICKFSHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTVAAELAMFRVFNKYPGAKVVY
IAPLKALVRERIEDWKVRIEEKLGRKVVELTGDVTPDMRSIAKADLIVTTPEKWDGVSRS
WQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKPVRVVGLSTALANAR
DLADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPCFQAIRSHSPAKP
VLIFVSSRRQTRLTAMDLMAFLATEDDPKQWLHQDEREMENIIGTVRESNLKLTLAFGIG
LHHAGLHERDRRTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYFDGKTHRYVD
YPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNA
EIASGTIASKQDAMDYITWTYFFRRLVMNPSYYELDDTSSDTINKYLSNLVERSLRDLEC
SYCIEIQEDERTIEPLTYGRIGSYYYLRHQTVRMFKERLKAELPVADLLSVLTDAEEYAE
LPVRHNEDQLNSELAQRLPLKVNPHSYDSAHTKCHLLLQAHFSRATLPCSDYATDTKTVM
DNAIRICQAMLDVVANEGWLVSALSICNLVQMTIQGRWLHDSSLLTLPHIEQQHLYLFRR
WASRGGRGGGKGGAYDGPIESLPELMAACGGREDMFAAMVREELQPNQVSQAWCFLAQLP
VVEVSVGVRGWWEGAGAGEQAERPVPLAGSNLRESSSWLPLHADQEYVLQVTLRRVNAGQ
QRRKQDSKAQAPRFPKPKDEGWFLVLGEVDKKELLAVKRVGYIRNHTTVSIAFYTPERPS
KCIYTLYLMSDSYLGLDQQYDLHLNITSASIQNKVNTEVSESTDNMTL
NT seq
6627 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgccccgtctgaccggcgctctgcgctccttttctagcgtctgcaagaaagag
gacatcgcagaagatgagtataatctaaaggccaaacgcctgaagagacaggaacgattc
gccaaagagggcctcacctggcagaagatcgtccagttcttcacccagcacctggacaag
aaggaccagcaggccgctcaacaggagctcaagggtctcctgcactctgctaagcagata
gtcggcgccgaccatggccaggacaccattgagagtgcgggcgtcttcctgtttgagacg
ttcctgggccgggagcgtctgggcgcagaggagacgcgcgccgtccgccacatgttcggc
cccttctccgcaacggccgccgaggcctgcctggcgtccgtgtcacgcctcgtgacctcg
gtgggcgaggcggaggcgttcgtccggacccagaacgccggaaggtacggcctgggcgac
gcctccagcaccgccttcggccgcaacatcgccttctcccacgatggctacatactggac
tgccacgagcccccgccttggctcgacgtccccgacgaggacgcaggagacctgggcttc
gaggatttcctcaacaaccacgtgggccggggccaggcggccggctcgggggcccaggct
ggggggagcggcggaggcagagacactggcgcgtccatcctcagggaggaggtagacaag
taccagaacgcggggaacatgatgtcctccagccccgaggagctgtgcacctcgctgttt
gagatgctggcctcgcagaagagcgatgaagagctgcagaacgagctgtttgagttcctg
ggtgctgatggctttgaggtgatcctgaatctgcttcagcgccgctcagacatcgttgac
gctctcctgtccatgccacctgagaaacgaggcaactacgtcccagcaggtggtgcggaa
ggcagcaggccggcctacggctgccaggtggtcgtccagtcgaagcaggagcggctgatg
atgaagatgaaccgacgcgaggagaagcgcgagaggaagcgcgagaaacgcgtcgacgac
ggcggcgagtacgccgaggccagcttcgctttcgaccccaaggagatgaggcttcaaagg
gagcaggccctgctcacagcccgccgttcaccagtgctcggccgacactacgagcctgag
aggatccgcttcccgaacgtctacgactctttcgccgaggcagtcaaaacgtctgccttt
gtgggaggagccaagttgatgcttcctgaggggatccgacgggataacaacaagttgtat
gaggaggtttccatcccacctactgagcccatgcctttgggattcgaggagaaggctatc
tacatcactgacctggatgagattggtcaggtggtgtttaagggcatggagcgcctgaac
cgtatccagtccatcgtcttcgagacggcctacaacaccaatgagaacctgctcatctgt
gcccctactggtgcgggcaagaccaacatcgccatgctgaccgtactacacgagatccgt
caaaaccttcagccagggggcgtcatccgcaaggaccagttcaagatagtgtacgtggcg
cctatgaaggcactggcagcagagatgactaattacttcagtaagcgcctgcaaccgctg
ggcatcgcagtcaaagaactcaccggagacatgcagctcaccaagggagagatactacgc
actcagatgctggtgaccactccggagaagtgggacgtggtgacccgtaagagcgtgggc
gacgtggctctctcccaggtggtgcggctgctcatcctggacgaggtgcacctccttcac
gaggaccgagggcctgtgctggagagcctggtggcccgcaccctccgacaggtggagtcc
acccagagcatgatccgaatcctgggcctgtcagccacactgcccaactacctggacgtg
gcctccttcctgcacgtcaacccctacatcggcctcttctacttcgacagccgcttcaga
cccgttcccctcggacagagcttcctgggcgtcaaggccaccggcaagatccagcaactg
catgacatggaggaggtgtgctatgaaaatgtcctgaaacaaatcagaaatggacaccag
gtgatggtgtttgtacacgccaggaacgccactgtacgtacagccatgaacctgatcgag
atggccaagaaccggggcgaggtgtcctttttccaggtggaccacggacccgactatggc
cagtgtgagaagcaggtgcagcgctcgcggaacaagcagatgcgggagatgttccccgag
ggttttgggatccatcacgcaggcatgctgcgccaggaccggaccctgatggagaacatg
ttctccaggggctacctgaaggttctagtgtgcaccgccaccttggcctggggagtcaac
ctgcccgcccatgcagtcatcatcaagggcacacagatctacgatgccaagcggggcgcg
ctggtggacctgggcatcctggacgtgatgcagatcttcgggcgcgccggtcggccacag
ttcgacaagtacggcgagggcaccatcatcaccacccatgacaaactgagccactacctc
acactgctcacccagcagaaccccattgagagccagttcctgcagagcctcgcagacaac
ctcaacgcagaggtcgccctggggacggtgactaatgttgaggaggcggtgaagtggctc
agctatacctacctgtttgtgcgcatgagggccaacccactggcctacggcatcaactac
aaagcctgccagatggaccctgggctagacctgtaccgtaaggagctggtggtggaggcc
ggacggaagctggacaaggcccgcatgatccgcttcgaggagcgcaccggatacttccac
tccactgacatgggccgcaccgccagtcacttctacatcaaatacaacaccattgagacg
tttaatgagctgtttagcgcccagaagacggaagcagatatcttgagcatcgtgtccaaa
gcggaggagtttgagcaggttaaggtgcgtgatgaggagagtgaggagctggagaggttg
ctgactgatgtctgtcagcttcccgcggcaggaggggtggagaacggctacggcaagatc
aacatcctcctgcagacctacatcggccgcggggaggtggacagcttctcgctcatatcc
gacctgtcctacgtggctcagaacgcggcgcgaatcgtgcgagcgctgttcgagatcgcc
ctgcgtaagcgctggccgggcatgacgtaccgtctgctgaacctgtgcaaggtgattgac
aagcgcctgtggggctgggcacaccccctgcgccagttcgccatgctgccccacacggtg
ctcggccgcctggaggacaggaacctcagcgtggacatgctcaaggaaatgagcaaggat
gagatcggtcacatgctgcaccatgtgaacattgggctgaaggtgaagcaggccgtgcac
cagatccccgccatcctcatggaggccagtattcagccaatcacgcgcaccgtcctcagg
gtgcgcctcaccgtcacccctgacttccgctggaacgaccaggtgcacggctcagtgggg
gagccctggtggctgtgggtggaagatcccgtcaacgaccacatctaccactctgagtac
ttcatgctgcagaagaaacaggtggtgacagacgagccgcagcaggtggtcttcaccatc
cccatctttgagcccatgccttcccaatactacatcagagccgtgtctgaccgctggatc
ggatctgaggctgtgtgcatcatcaacttccagcatctcatactgcctgagagacaccca
cctcacacagagttgctggacctgcagccgttgcccgtcaccgctctggggaaccgcgcg
tatgaaaccatctgcaagttcagccacttcaaccccatccagacgcagatcttccacacg
ctctaccacaccgacaccaacgtgctgctgggggcgcccaccggctcgggcaagaccgtt
gccgcagagctggccatgttcagggtgttcaacaagtacccaggcgcgaaggtggtctac
atcgcccctctcaaggccctggtcagagagaggatagaagactggaaagtcaggatagag
gaaaaactaggtcgcaaggtggtagagctgaccggtgatgtgactcctgacatgcggtct
atcgctaaggcggacctgatcgtcaccacgccggagaagtgggatggcgtgagccgcagc
tggcagaaccgcagctacgtgcagaaagtggccatcctcatcatcgacgaaatccatcta
ctcggggaagaccgaggccccgttctggaggtcatagtctccaggaccaacttcatctcc
tcacacacctcgaagccggtgcgagtggtagggctgtccacggcgctggccaatgctcga
gacctggccgactggctgggcatcggacaggtgggcttgtttaatttccgtccatctgtg
cgtcccgtgccattggaggtgcacatccagggttttcctgggcaacactactgcccccgc
atggccagcatgaacaagccttgttttcaagccatccgcagccactctccagccaagcct
gtgttgatcttcgtgtcgtcgcggcgacagacacgcctgaccgccatggacctgatggcc
ttcctggcgacggaggacgaccccaagcagtggctccaccaggacgagcgtgagatggaa
aacatcatcggcacggtgcgggagtccaacctgaagctgacgctggcgttcggcatcggc
ctccaccacgccggcctccacgagcgcgaccgcaggactgtggaggagctcttcgtcaac
tgcaagatccaggtgctgattgccaccagtaccctggcctggggggtgaacttccctgcc
cacctggtcgtagtgaagggcacagagtactttgatggcaaaacccaccgttatgtggat
tatcccattactgatgtgctgcagatgatgggtcgtgccggtcggcctcagtttgatgac
cagggcaaagccgtcatcctggtgcacgacatcaagaaggacttctacaagaagttcctg
tacgagcccttccctgtggagtcaagcctgctgggagtgctgtctgaccatctgaacgct
gagatcgcctcaggcaccatcgcctctaagcaggacgccatggactacatcacctggacc
tacttcttccgccgcctcgtcatgaaccccagctattatgaattggatgacaccagcagt
gacaccatcaacaaatacttgtccaacctggtggagagaagcctgcgtgatttggagtgc
tcctactgtatagagattcaagaggacgagcgcaccattgagccgctcacatacggccgc
atcgggtcctactattacctcaggcaccagaccgtgcgcatgttcaaggagcgactcaag
gctgagctgcccgtggccgacctgctgtctgtcctcacggatgcggaggagtacgcagag
cttcccgtgcggcacaatgaggaccagctgaacagcgagctggctcagcggctcccccta
aaggtgaacccacactcctacgacagcgcacacaccaagtgccacctgctgctacaggct
cacttcagccgcgccacgttgccctgctctgactacgccaccgacaccaagactgtcatg
gacaacgccatacgcatctgccaggccatgctggacgtggtggccaatgagggctggttg
gtgtctgcactcagcatatgtaatctggtgcagatgaccattcagggccgctggctacac
gactcctccctactcacactgcctcatattgaacagcagcacctctacttgttcaggagg
tgggcctccagaggagggaggggcgggggtaagggcggggcctatgacggaccaatcgag
agcctgccagagctgatggcggcgtgtggcgggcgggaggacatgtttgctgccatggtg
agagaggagctgcagcccaaccaggtttcccaggcgtggtgtttcctggcccagctgccg
gtggtggaggtgagcgtgggggtgcgtggctggtgggagggggctggggcgggggagcag
gccgagaggcccgtgcccctggccgggtccaacctgagggagagcagcagctggctgccc
ctccacgctgaccaggagtatgtgctgcaggtcaccctacgccgggtcaatgccggacag
cagaggagaaagcaggacagtaaggcacaggctcctcggttcccgaagcccaaagacgag
ggctggtttctggtgctgggggaggtggacaagaaagagctgctggctgtcaagcgcgtg
ggctacatcaggaaccacaccaccgtctccatcgccttctacacgcccgagaggcccagc
aagtgcatctacacactatacttgatgagtgacagctacctggggctggaccagcagtac
gacctccacctcaacatcacgtcggccagcatccaaaacaaggtcaacaccgaagtgtcc
gagagcacagacaacatgaccttgtag
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integrated database retrieval system
