Clupea harengus (Atlantic herring): 105910085
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Entry
105910085 CDS
T09045
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X2
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
char01001
]
105910085
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105910085
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
105910085
Protein kinases [BR:
char01001
]
Serine/threonine kinases: Other
Other
105910085
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105910085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
WD40
LisH
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
zf_topless
Motif
Other DBs
NCBI-GeneID:
105910085
NCBI-ProteinID:
XP_012694219
Ensembl:
ENSCHAG00000026637
UniProt:
A0A6P3WBA4
LinkDB
All DBs
Position
1:complement(27411629..27430135)
Genome browser
AA seq
1570 aa
AA seq
DB search
MAGVAEASVDSKAELTSLLEQWERDQQGTTQDLVAILTKISELVERETEEYRKADPDPFD
DRHPGRADPECMLGHLLKILFKNDDFMNALVNTYVMSSREITLNTAACRLLLNIMPGLET
AVVFQEKEGIVEKLFKWAQEAEQPLRIYSVGLLAGAMENQDIAANYREENSVLVPLMLQR
LRELQEREVESRREFRRPSPRKPPSLEPMLPLDEETVDCSAFEDKNGMDKSGIAEEGESA
GTRGDCYGLEPNNEISFNLGSAQKSTSLANSLRKSLSKMESPDSESPGADVSDGQTEGGR
QAQKKTERENGRKAKQKLNFTLSEPERSLSELSNSSWSEMSPWVIGQNYHLDPLTPAIEQ
RLILQYLTPLGEYQELLAVFMQLGARQLLMHYMDLKQTNDVQLTFEALKYLASLLLHKKF
AAEFVAHGGVQKLLDIPRPSMSATGVSLCLYYLAYNQDAMERVCMLPHSILSEVVKYTLW
LLECSHASGCCHATMFFSISFSFRAVLELFDQQDGLRRLVNLISTLEILNPEDQGALLSD
DEIFSSRQTAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHPQPYYKACTYTHEQ
VVEMMEFLFEFGPVRLYWEAAEVFHNMSCVQLLLQLISIACDWRTYYGRSDTVRYALDIL
SILTVVPKTQLLLAEPVAVLDEGGSTISTVGMSIVLVVAEGEVFVNDAEIQKSALQVVIN
CVCAPDKRVSSIGKFMGGTPRRRLPQSNRASESVLAKMWNVVQSNNGIKVLLSLLTIKMP
ITDADQIRALACKALVGLARSAAVRQIISKLPLFSSGQIQTLMKEPVLQDKRSEHVRFCK
YSAELIERVSGKLLLMGTDVSLARLQRASVVAQSRISFPEKELLLLIRNHLVAKGLNDTA
TTLTKEADLPMAPLAHSHPSHPVPFAGPGVSMTAPTAPAAILPRTPRLVNGVAARFGIHT
STSPSLHAQPRPSNSLLHIALPSSSSSSSSAAAVIPQSSAPQTATYSNGSPLIGRILFTR
ERPSPCTDRRKPRVLRQKSDHGAFSQSPAMKKQLDRHLPSPPALDSIITEYLREQHARCK
NPVTTCPLFSLFTPHQCPEPKQRRQAPANFAPRLTRRTVYPKYGGVDGGCFDRHLIFSRF
RPISVFREADEDESGFMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITH
LEPSRDGSLLLTSASWSYPLSALWGMKSVFIMKHSFLDDHYVEFSKLSQDRVIGTKEHVA
HIYDIQTGLKTLTLNNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNM
NISGVFHPNAQEVIINTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMRQADDDDD
MLEQQMKSPFGSSFRTFDATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDAINMDTV
CRLYEVGRQRLAEEEEDEDDQDEEEQEEDDDDDDSDDDLDDIDMDDIETDPILAELENDN
NGEEEDGDNDFSPSDDEEVARLLEEEGDDDDDDDDDDDDSDDNDAELVLDNTDSSDNSDL
EDDIILSLNE
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggtggcggaggccagtgtggactcaaaggcagagctcacttctctgctggag
caatgggagagagaccaacaggggaccacacaagacctggtggctatcttaaccaagata
tctgaactggtggagagagagacagaggagtaccgtaaagccgaccctgacccctttgat
gatcggcacccaggacgagctgatccagagtgcatgcttggacacctgctgaagatcctc
ttcaagaatgatgacttcatgaatgctctggtgaacacgtatgtgatgagcagtagggag
attaccctcaacacagccgcttgtcgcctcttgctgaacatcatgccagggctggaaact
gctgtcgtgtttcaggagaaggaggggattgtggagaagctgtttaagtgggctcaagag
gcagagcagcccttgaggatctattctgtgggtctactagcaggagctatggagaaccag
gacatcgctgccaactaccgtgaagaaaactctgtattggtgccactaatgttgcagcgc
ttgcgggagctgcaagaacgagaggtggagagcaggagggagttcaggcggccaagtcct
cgcaagccccccagtttggagcctatgttgcctctggatgaggagacagtggactgcagc
gccttcgaagacaagaatggcatggacaagagtgggatagcggaagagggagagagcgca
ggtacaagaggagattgttatggtttagagcccaacaatgagatttctttcaaccttgga
tcggcgcagaagtccaccagtctcgccaactcgctcaggaagagtctctccaagatggag
agcccagacagcgagtcccctggagctgacgtaagcgatgggcaaaccgagggaggaagg
caggcgcagaagaagacagagcgagagaacggtcgcaaggctaaacagaagctgaacttc
accctgtccgagccagaacggagccttagtgagctgagcaacagcagctggtcagagatg
agcccgtgggtgattggccagaactaccacttggaccctctcacacctgctattgaacag
cgtctcatcctgcagtacctgaccccactgggggagtatcaggagctgttggcagtattc
atgcaactgggagccagacagcttctcatgcactacatggatctcaaacagactaatgac
gtgcagttaacctttgaagccctcaagtatctggcctccctgctgttgcacaagaagttt
gctgctgagtttgtggctcatggtggagtgcagaagcttctggatattccacgtccctcc
atgtcggccaccggtgtttccttgtgtctgtattatctggcttataatcaggatgccatg
gagagggtgtgtatgcttccccactccatcctctctgaggtggtgaagtacaccttatgg
cttctggaatgctcccatgcctcaggctgttgccatgcaaccatgttcttctccatctct
ttctccttccgggcggttctggaattgtttgaccagcaggatggactgcgtcgtctagtc
aatctgatcagtacactggagatcttgaacccagaggatcagggtgcactgcttagtgat
gatgagatcttctctagcagacagacagccaaacacacctgtatggcactgcgcaggtac
tttgaggctcacctggccatcaaggtggagcaggtcaagcagtccctgcagcgcacagaa
gggggagctccaatccacccacagccgtattacaaggcgtgcacatatacacatgagcag
gtggttgagatgatggagttcctctttgagtttgggcctgtgcgtctctactgggaggca
gcggaggtcttccacaatatgtcttgtgtgcagcttctgcttcagcttatctcaatagcc
tgtgactggaggacatactatggcaggagtgatacggtgcgttacgcgctggacatactg
agcatcctgacggtggtgccaaagacccagctgctgctggctgagccggtggccgtgctg
gatgaggggggctccaccatctccaccgtgggcatgagcattgttctggttgtggctgag
ggcgaggtgtttgtcaacgatgcggagatccagaagtcggcgctgcaggtggtcatcaac
tgcgtgtgcgcgccagataagcgagtgtccagcatcggcaagttcatggggggcaccccg
cgccgccgcctgccccagagcaaccgcgccagtgagagtgtgctggccaagatgtggaac
gtggtgcagtccaacaacggcatcaaggtgctgctttcgttgctcaccatcaagatgccc
atcacggacgccgaccagatccgcgctctggcctgcaaggccctggtgggactggcccgc
tcggccgccgtccgccagatcatcagcaagctgccgctcttcagcagcgggcagatccag
acgctgatgaaggagcccgtgctccaggacaagcgcagcgagcacgtgcgcttctgcaag
tactccgccgagctgatcgagcgtgtctcgggcaagctgctgctgatgggcacggacgtg
tcgctggcgcggctccagagggccagcgtggtggcgcagtcgcgcatctccttccccgag
aaggagctgctgctgctcatccgcaaccacctggtggccaagggcctgaacgacacggcc
accaccctcacgaaagaggccgacctgcccatggccccgttggcacacagccacccctcc
caccccgtgcccttcgccgggccgggcgtctccatgactgcaccgaccgccccggccgcc
atcctcccacggactccaaggctggttaatggtgtggcggcgcgctttggaatccacacc
tccacttcgcccagccttcatgcccaacctcgcccctccaactcactgctccacatcgcc
cttccctcctcctcctcttcctcctccagcgcagctgccgtcatcccgcagagttccgcg
cctcagactgccacttacagtaacggctcgcctctgattgggcggattttgttcacacgg
gaacgtccgtctccttgcacggaccgccgcaagccacgcgttctgcgtcagaagtctgat
cacggggctttcagccagagccctgccatgaagaagcagctagaccgccacctgccctcg
ccccccgcgctggacagcatcatcacagagtatctgcgggagcagcacgcccgctgcaag
aaccctgtcaccacctgcccgctcttcagccttttcaccccgcaccagtgccctgagccc
aagcagcgccgccaggcccccgccaacttcgccccgcgcctcacccgccgcaccgtctac
cctaagtacgggggcgtggacggcggctgcttcgaccggcacctcatcttcagccgcttc
cgaccgatctcggtgttccgcgaggcggacgaggacgagagcggcttcatgtgctgtgcc
ttctcagcgcgggagcggttcctcatgctgggcacgtgcaccggccagctcaagctgtac
aacgtcttcaccggacaggaggaggccagctacagctgccacagctcagccatcacacac
ctggaaccctcccgggatggctctctgctgctcacctcggcctcctggagttaccccctc
tcagccctctggggcatgaaatcagtcttcatcatgaagcattcctttttagacgatcac
tatgtggagttcagtaaactttctcaagacagggtcatcgggacaaaagagcatgttgct
catatatatgacatccagacaggcctaaaaacgctcactctgaataaccctgacctggcg
aacaactacaagaggaactgtgccaccttcaatcccacggacgacttggtcttgaatgac
ggtgtcttgtgggatgtgcgctctgctcaggccatccacaagtttgacaagttcaacatg
aacatcagtggtgtcttccaccccaatgcccaggaggtcatcatcaacacagagatctgg
gatctacggacatttcacttacttcacacagtcccagcacttgaccagtgtaggattgtg
ttcaataacaatggaacagtcatttatggagcaatgcggcaggctgatgatgatgatgac
atgctggagcagcagatgaagagtccctttggctcctccttccgtacatttgatgctacc
gactacaaacccatcgccactatcgatgtgaagaggaatatatttgatctgtgtacagac
acaaaagactgctacctggctgtaatcgagaaccaggatgcaattaacatggacacagtg
tgtcggctctacgaagtggggcgacagcgcttggcagaggaagaggaggatgaggacgat
caggacgaggaagagcaggaagaggatgatgacgatgatgactctgatgatgacctggat
gacatcgacatggatgacattgaaacagaccccatcttggcagagctggagaatgacaac
aatggagaggaagaggatggtgacaacgacttctctccatcggatgatgaagaggtggca
cgtttgctggaagaggagggagatgatgacgacgacgacgatgacgacgacgatgattct
gatgataatgatgcagaattggtcctggacaacacagacagctccgacaactctgatctg
gaggacgacatcattctctcactgaacgagtga
DBGET
integrated database retrieval system
