Clupea harengus (Atlantic herring): 105910091
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Entry
105910091 CDS
T09045
Symbol
parga
Name
(RefSeq) poly(ADP-ribose) glycohydrolase isoform X1
KO
K07759
poly(ADP-ribose) glycohydrolase [EC:
3.2.1.143
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105910091 (parga)
Enzymes [BR:
char01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.143 poly(ADP-ribose) glycohydrolase
105910091 (parga)
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Gene cluster
GFIT
Motif
Pfam:
PARG_cat_C
PARG_cat_N
Motif
Other DBs
NCBI-GeneID:
105910091
NCBI-ProteinID:
XP_031435055
Ensembl:
ENSCHAG00000007559
UniProt:
A0A6P8GDH8
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Position
13:complement(15643813..15679442)
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AA seq
760 aa
AA seq
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MMEAESLVSADLNSEETRNHLLKQVQADGKDSASIKTCNNSNKSTDRSDQNLSVMCDSQL
GSSNMNCEQISGSAESESGLVDYPVNRVNSPNGQKPSKPDCRAAEISTGKTLSLSLNEAS
CITQDVEMLSPQSPTCKISTCKESMEGTGALVTPCSTCLTPGENTSDKPDTPDTRAKEQV
GERCDAAAVESSAHKTDCIASSVLNPVTYQQENSWTKLPKSELTEDRRDKLWMGTPVDEL
RRMPLCGHPLPHLKVAPNHYVMIRTDLLREGEVPMPYPGKFRDTWDDMAVKMPCSEKNLF
PVETNQDGNTVQSRWDLICAALESECKSSLDIRDAILRYSTTHAKRWDFTALNVLCTDAL
ELNEVQQLFEVLLPSMVQLALSAPHLCTQPIPLLKQRMNHSVTLSQEQLACLLANAFFCT
YPRRNSRKAEYANYPDINFYRLFEGASPRKIEKLKTLLCYFRRVTESRPTGLVTFTRQSL
TNFPKWESSRTLLTRLHITCEGTIEDQGYGMLQVDFANRLVGGGVTGRGLVQEEIRFLIN
PELIASRLFTEALEHNECLIITGTEQYSKYSGYAESYKWKESHKDETPRDDWQRRCTEIV
ALDALKYRHFLEQFPPDKMTRELNKAYCGFFRPGVNSQYLSAVATGNWGCGAFGGDTRLK
ALLQIMAAAESGRDMAYFTFGDADLMRDVSDLHTFLTDRAVTVGKLFGELKQYFNVVCKN
CSGPLPDVSLYGFLYERLSSDPEPAEPSEITATTPGPPTD
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagctgagagccttgttagcgcagatttaaactcagaggagacaaggaatcat
ctccttaaacaggtccaagccgacggaaaggattctgcatcaattaaaacctgcaacaac
agtaacaagtctacagatagaagtgaccagaacctgagtgtcatgtgtgactctcagtta
gggtcttccaacatgaactgtgaacaaatcagtgggtcagctgagtcggagtccggtctt
gttgactatcctgtcaatcgagtgaattctccaaacggacagaagccttccaagcctgac
tgtagagctgccgaaatttccactgggaagaccctcagtctaagtttaaatgaagcatct
tgcattacccaggatgtggaaatgttgagcccacagagtcctacatgcaaaatctccacg
tgcaaggagtctatggaggggactggtgctttagtaacaccctgtagtacctgtctaaca
ccaggggaaaacacctcagacaagccagacacgccagacacaagggccaaagagcaagta
ggtgagcgctgtgatgctgctgctgtggaaagctctgctcacaagactgactgcattgcc
tcatcagtgttgaaccctgtaacttatcaacaggagaacagctggacaaagttgccaaaa
agtgagctgacagaagatagaagagacaaactgtggatgggaacacctgttgatgagctt
aggaggatgccattgtgtggtcatcccttgccccacttgaaggttgcaccgaatcattat
gtaatgatcaggacagacctgcttagggaaggtgaagtccctatgccttacccaggcaag
ttcagagacacttgggatgacatggctgtgaagatgccctgttctgagaagaacctcttc
ccagttgagaccaatcaagatggaaacactgtccaaagtagatgggacttgatctgtgca
gctttggaaagtgaatgcaaaagctcactggacattagggatgcaattctgagatacagc
accacccatgccaagcgatgggacttcacagccctcaatgttctttgcactgatgctctg
gagctcaatgaggtccaacagctgtttgaggttctgctccccagcatggtccagctcgcg
ctcagtgcccctcacctctgcacacagccgatcccgctgctgaagcagaggatgaatcac
tccgtcacgctgtcccaggagcagctcgcctgcctgctggccaatgccttcttctgcacc
tatcctcgacgcaactccagaaaggcagagtacgccaactacccagacatcaatttctac
aggttgtttgagggcgcctctccacgaaagattgagaaactgaaaaccttgctgtgttat
ttccggagagtcaccgaatccagacctacaggccttgtgacgttcaccagacaaagcctt
accaattttcctaaatgggaaagctcccgcactctactcacgcgattgcacattacctgt
gaggggactattgaagatcaagggtatggtatgcttcaggtggactttgccaaccgactg
gttgggggaggggtgactgggcggggcctggtgcaggaggagatccgcttcctcatcaac
cctgagctgattgcatcacgcctcttcactgaagccctggaacacaacgagtgccttatc
atcacaggtacagaacagtacagtaagtactctggctatgctgagagctacaaatggaaa
gagagtcacaaagatgagacaccaagagatgactggcagaggagatgcaccgagatagtg
gctctggacgcattgaagtacagacactttctagagcagttcccccctgacaagatgacc
agagagctcaacaaggcatattgtggatttttccgcccaggagtgaacagccagtacctc
tctgctgttgccacaggaaactggggatgtggagcattcggaggagatacacgactcaaa
gctctgctgcagattatggcagctgctgagagtggacgggacatggcctacttcacgttt
ggggatgctgacctaatgagggatgtgagcgacctgcatacattcctcacggacagagcc
gtgactgttggtaaactgtttggagaactgaagcagtattttaacgtggtgtgtaagaac
tgctctgggccgctgccagatgtgagtttgtatggatttctgtatgagaggctcagctcg
gatcctgaacccgctgaacccagtgagatcacagctacgacacctggcccacccacagac
tga
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