Clupea harengus (Atlantic herring): 105910105
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Entry
105910105 CDS
T09045
Symbol
tcea3
Name
(RefSeq) transcription elongation factor A protein 3 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105910105 (tcea3)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105910105 (tcea3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
DUF7918
DUF325
EAD11
Motif
Other DBs
NCBI-GeneID:
105910105
NCBI-ProteinID:
XP_012694240
Ensembl:
ENSCHAG00000011394
UniProt:
A0A6P3WBF8
LinkDB
All DBs
Position
11
Genome browser
AA seq
683 aa
AA seq
DB search
MTREEDLVRIAKKLDKMVSRNNTDGALDLLKELQSFNMTLKLLQDTRIGMSVNGIRKQCT
DEEVVALSKILIKNWKRLLESAQNEKAEKSDEIKNGTEAGKPPGSLKRTASEDEPRKNVL
KNGALNSTANSSSRPPPPQNRRLEMMRESKTLMDELFPPPPPIHIPRRPCVEARRERKNL
TETTSITPNHLHPPRRASVDIKKDRHVNGKGQEPKPHPPPPPAHSPHLPPARRPSVEVKK
ERSDRQTVSIHSPASFRRPAAEMKKERKEPPDPNAPFAPLPFHLHPPPVKKDRKEPPDPN
APLAPLPLHRHPPPLKKERKEPDPHTPLPHLPLRLHPPAMKHPVEEIKKDRKDSTDSKHN
TQKQSSGHSKKERKDSGDSKPPKKPSVEIRKDRKDSTDSKQQSSKRPSLDGKKERKESSE
AKLGHHVKRQLSDSKPERRDSTSSKSASSLPAKKLKGERESHGSKLAHPGPLQRKASTDS
LDGRKGKLDTPKTPTTPTSPMSPYFNSPGGPLSPRLLTGETIRDKCIEMLTAALATDDDY
KDYGINCDAMAAEIEDYIYKELKVTDMKYKNRVRSRISNLKDPKNPNLRKNVLAGSIDLI
RFATMSAEEMASDDLKQLRHTLTQDAIREHQLAKTMGTTTDLLQCGKCKKRNCSYNQVQT
RSADEPMTTFVLCNECGNRWKFC
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgactcgagaggaggacctagttcggattgctaaaaaactggacaagatggtgtctaga
aataacacggacggagccttggacctgctgaaagaactgcagagcttcaacatgacccta
aaacttttgcaggacacacggattggcatgtctgtgaatggaatcaggaagcaatgtact
gatgaggaagttgttgcactttcaaagatcctcattaagaactggaaaaggcttctagaa
tctgctcagaatgaaaaggccgaaaagtcagatgaaataaaaaatggaacagaggccggc
aaaccaccagggagcctcaagaggaccgcatcagaggatgagcccagaaagaacgtgttg
aaaaatggcgctctcaactccaccgctaactcctcctcacgtcctcctccaccccaaaac
agacgtctagagatgatgagagagagcaaaacactcatggatgaactgtttccaccgcca
cctcccattcatattccaagacggccgtgtgtagaggccaggagagaaaggaaaaatctg
actgagaccacatccattacaccaaatcatctgcaccctccaaggagagcgtctgtagat
attaagaaggacagacatgtcaatggaaaaggccaagagccaaagcctcaccctcctcct
cctcctgctcattccccccatcttcctcctgcccggcgtccatctgtggaagtgaagaag
gagaggtcagacagacagactgtgtccattcattctccggcgtcattcaggcgccctgca
gctgagatgaagaaggaaagaaaagaaccaccggatcccaatgcacctttcgcccctctc
cccttccatctccaccccccaccagtgaagaaggacagaaaagaacctccggaccccaac
gcacccctggcacccttacccctccaccgtcatcctcctccgttgaagaaagagagaaaa
gaacccgacccacacactcctcttcctcatcttcctcttcgtcttcaccccccagctatg
aagcacccagtggaggaaattaagaaggacagaaaggactcaacagactccaagcataat
acacagaaacagtcgtctgggcactcgaagaaagagagaaaagactcaggggacagtaaa
cctcccaaaaagccgtcagtggagatcagaaaagacaggaaagactcaacagattccaaa
cagcagtcttctaaaagaccaagcctggatggaaagaaagaaaggaaggagtcttctgaa
gctaagttaggtcatcatgtgaaacgacagctgagtgactctaaacctgagaggagagac
tctaccagctcgaagtctgcaagctcactgccagctaagaagctcaaaggggagagagag
tcacatggctccaagttggctcatcctggacccctccagaggaaagcttctactgatagc
ctggatgggcgcaaggggaaactggacacccctaaaactccgacaacgcccaccagcccc
atgtccccgtacttcaattccccagggggtccactgtctccacgactgctcacaggggaa
acgatccgggacaagtgtatcgagatgctgacagctgccttagctacagacgatgattat
aaagactatggaataaactgtgatgccatggcagcagaaattgaagactatatctataag
gaacttaaggtcacggatatgaagtataagaacagggtgcgtagccgcatcagtaacctg
aaggatccgaagaatcccaacctgcgcaagaacgtcctggcaggatccatcgatctgatt
cgattcgccaccatgagcgcagaggagatggccagtgacgatctgaagcagctgaggcac
accctgacccaggatgccatccgtgagcaccagttggccaagaccatgggcaccaccacc
gacttgctccagtgcggcaagtgcaaaaagaggaactgcagctacaaccaggttcagacc
cgcagtgctgatgagcccatgaccacctttgtgctgtgcaatgagtgtggaaaccgctgg
aagttttgctga
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