Clupea harengus (Atlantic herring): 105910112
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Entry
105910112 CDS
T09045
Symbol
rpa2
Name
(RefSeq) replication protein A 32 kDa subunit
KO
K10739
replication factor A2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03030
DNA replication
char03420
Nucleotide excision repair
char03430
Mismatch repair
char03440
Homologous recombination
char03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105910112 (rpa2)
03420 Nucleotide excision repair
105910112 (rpa2)
03430 Mismatch repair
105910112 (rpa2)
03440 Homologous recombination
105910112 (rpa2)
03460 Fanconi anemia pathway
105910112 (rpa2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
char03032
]
105910112 (rpa2)
03400 DNA repair and recombination proteins [BR:
char03400
]
105910112 (rpa2)
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105910112 (rpa2)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105910112 (rpa2)
MMR (mismatch excision repair)
105910112 (rpa2)
DSBR (double strand breaks repair)
HR (homologous recombination)
105910112 (rpa2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
TFA2_Winged_2
Motif
Other DBs
NCBI-GeneID:
105910112
NCBI-ProteinID:
XP_012694250
Ensembl:
ENSCHAG00000003220
UniProt:
A0A6P3WBC2
LinkDB
All DBs
Position
11:14363311..14369422
Genome browser
AA seq
279 aa
AA seq
DB search
MYNHGGYGESTGGGYTQSPGGFGSPSASQGGEKKRLRAQHIIPCTVSQIKSAIQSEDVFK
VGEVEIAQVTIVGVIRSMDKSMTNIQYIVDDMTAGPMDVKQWVDTEELSVDNTVIPPGTY
VKVSGNLRSFQNNRSLVAFRVRPLEDMNEITSHMLEVVQAHMQLNKPQAMMISGGGGMGM
ASVPASNMGMGGTNTMGGGGSYGGASSVVSNGLSPNQNQVLCLIKSCPEPQGISIQELKQ
RLSAMSVSIIRQVVDFLSNEGHIFSTIDEDHFRSTDNEA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtataatcatggtggttatggagagagcacgggtggagggtacacccagtctccagga
ggttttgggtctccttcagcctcccagggaggagagaagaagaggttgcgggcccaacac
atcatcccctgcacagtgtcccaaatcaagtcggctatccagtccgaggatgtctttaaa
gtaggggaggtggagatcgcccaggtcacgatagttggagtgatcagaagcatggacaaa
tccatgaccaacatccagtacatagtggatgacatgactgctggtcctatggatgtgaag
cagtgggtggacacggaggaactcagtgtggacaacacggtcatccccccaggcacctat
gtcaaggtctctgggaatctccgatccttccagaacaatcgctctctggtggcgtttcgc
gtgaggcccttggaggacatgaatgagattacttcgcacatgttagaagtggtgcaggct
cacatgcagctgaacaaaccacaggctatgatgatcagtggtggtggaggaatgggcatg
gcctctgtgcctgcatctaacatgggcatgggtggcacgaacaccatgggaggcggcggc
agctatggaggtgccagctctgtggtctccaatggcctgagtcccaatcagaatcaggtg
ctgtgtctgattaagagctgtcctgagccgcagggcatcagcatacaggagctcaagcag
agactgagcgcaatgagtgtcagcatcatcaggcaagtggtggacttcctcagtaatgaa
ggacacattttctccaccatcgacgaagaccactttagatcaactgacaacgaggcctag
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