Clupea harengus (Atlantic herring): 105910131
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Entry
105910131 CDS
T09045
Name
(RefSeq) nectin-3-like protein
KO
K06592
poliovirus receptor-related protein 3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecules
char04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105910131
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
105910131
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105910131
04090 CD molecules [BR:
char04090
]
105910131
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
Nectin family
105910131
CD molecules [BR:
char04090
]
Proteins
105910131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
C2-set_2
Ig_2
I-set
C1-set
TM_ErbB1
Keratin_assoc
Motif
Other DBs
NCBI-GeneID:
105910131
NCBI-ProteinID:
XP_012694272
Ensembl:
ENSCHAG00000011740
UniProt:
A0A6P3WBI3
LinkDB
All DBs
Position
9:5507892..5555989
Genome browser
AA seq
579 aa
AA seq
DB search
MARRLRLRCHRSNITLCGLQAIVSLLFYWVAVVGSSEVSVPERVDAVLGKNITLGCRVEV
GANLTLTQSSWERRLPSGTITLAVFNPEYGISIADAYERRVSFVNPSTGDASIMLEGVGF
ADIGSYTCKVATFPLGNTQASTTVNILVEPKVHVLPGPSVLLDGGNETTVATCMAERGRP
AAEVFWESELELQGRSEGQRQDQSNGTTTSQVHYLWAPTRHAQGHTITCVVRHPALPAEV
RKPYVLNVQFAPDVQVVGYNSNWFSGQEDMKLDCQVNANPAPYSFTWTRVKGSLPDGVLG
DNSTLLFTRPLERNDSGLYRCEVRNAIGMRYQDTHIWVQDPPPTTALPTTSAGAATLPGA
DTTGTAPDHRQAQFSSPTQGSPSSSGSATDSHLGTIVGGVVGGVLFLVLLLGLVGVCFMR
QRRTFRGDYYTKQYLGPSDMQKDNQLDVLQPHELQVYSSGDGSGDSGKGSQDLKPPKPAA
GDLIYDYASDRKDREEWGGDHQQPPRVIGRDGSYYNDGHHNNQHPFPQQHQQHSNSPPAH
TGLNGSPYLPDDNCYDNGTDSDYVSHMDGSVISRREWYV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaggctgcgacttcgctgccacaggagtaatatcacactttgtggactacaa
gcaattgtctctcttcttttttattgggttgcagtggtgggcagcagcgaggtctcagtg
cccgagcgtgtggacgccgtcctgggcaagaacatcacgctgggctgccgggtggaggta
ggcgccaacctgaccctgacgcagagctcgtgggagcgccgcctgccctcgggcaccatc
acgttggccgtcttcaaccccgagtacggcatctccatcgccgacgcctacgaacgccgc
gtctccttcgtcaacccctcgaccggcgacgcctccatcatgctggagggggtgggcttc
gccgacatcggctcctacacctgcaaggtggccaccttccccctgggcaacacccaggcc
tccaccaccgtcaacatcctcgtggagcctaaggtgcacgtgctgccgggcccgtcagtg
ctgctggatgggggcaacgaaacgacagtggccacgtgcatggcggagcgcggccgcccg
gccgccgaggtcttctgggagtcggagctggagctgcagggccgctcggagggtcagcgg
caggaccagtccaacggcaccaccaccagccaggtgcactacctgtgggcacccacgcgc
cacgcccaggggcacaccatcacttgtgtggtgcgccacccggccctgcccgcggaggtc
cgcaaaccctacgtactcaacgtgcagtttgcccctgatgtgcaggtggtaggctacaac
tccaactggttctcagggcaggaggacatgaagctggactgccaggtcaacgccaacccg
gctccctacagcttcacctggaccagggtgaaaggtagtcttcccgatggggtgctcggg
gacaacagcaccctgctcttcactcggcccctggagcgcaacgactcgggcctctaccgc
tgtgaggtgcgcaacgccatcgggatgcgctaccaggacacacacatctgggtgcaagac
cctcctcccactaccgccctccccaccacctccgccggcgccgccaccctccccggagca
gacaccacgggcacggcccccgaccatcgccaggcccagttcagctccccgacgcagggc
tccccctcctcttcgggctctgccaccgacagccacctgggcaccatcgtgggcggagtg
gtgggtggcgtgctcttcctggtcctgctgctgggcctggtcggcgtgtgcttcatgcgt
cagcggcgcaccttccgcggggactactacaccaagcagtacctgggcccgtccgacatg
cagaaggacaaccagctggacgtgctgcagccacacgaactgcaggtgtacagcagcggc
gacggtagcggcgactctggcaaaggcagccaggatctgaagccccccaagccggcggcc
ggtgatctcatctacgactacgccagtgatcgcaaggaccgcgaggagtggggtggggac
caccaacaacccccccgtgtcattgggcgagacgggagctactataacgacggtcaccac
aacaaccagcacccctttccacagcagcatcagcaacactccaactctcccccggcccac
accggactcaacggctccccttacctgccggatgacaactgctacgacaacggcacggac
agcgactacgtgtcgcacatggacggctcagtgatctcgcgcagggagtggtacgtgtga
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